RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 TTBK2Q6IQ55 1244 aa22.78■■□□□ 1.24
COL13A1-202ENST00000357811 GALNT17Q6IS24 598 aa22.78■■□□□ 1.24
COL13A1-202ENST00000357811 C16orf86Q6ZW13 317 aa22.78■■□□□ 1.24
COL13A1-202ENST00000357811 NEDD1Q8NHV4 660 aa22.78■■□□□ 1.24
COL13A1-202ENST00000357811 SPZ1Q9BXG8 430 aa22.78■■□□□ 1.24
COL13A1-202ENST00000357811 PRPHP41219 470 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 PPP4CP60510 307 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 ZBED6P86452 979 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 APBA1Q02410 837 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 SNX29Q8TEQ0 813 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 HNRNPLLQ8WVV9 542 aaKnown RBP22.77■■□□□ 1.24
COL13A1-202ENST00000357811 CAPN6Q9Y6Q1 641 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 CASZ1Q86V15 1759 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 MARCH6O60337 910 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 MYBL2P10244 700 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 ZSCAN26Q16670 478 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 RRAGAQ7L523 313 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 SNED1Q8TER0 1413 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 CCDC88AQ3V6T2 1871 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 LAMB1P07942 1786 aa22.77■■□□□ 1.24
COL13A1-202ENST00000357811 LAD1O00515 517 aa22.77■■□□□ 1.23
COL13A1-202ENST00000357811 MOCS3O95396 460 aa22.77■■□□□ 1.23
COL13A1-202ENST00000357811 GTF2IP78347 998 aa22.77■■□□□ 1.23
COL13A1-202ENST00000357811 KIF5AQ12840 1032 aa22.77■■□□□ 1.23
COL13A1-202ENST00000357811 EZH2Q15910 746 aaKnown RBP22.77■■□□□ 1.23
COL13A1-202ENST00000357811 DPP8Q6V1X1 898 aaPredicted RBP22.77■■□□□ 1.23
COL13A1-202ENST00000357811 PNMA5Q96PV4 448 aa22.77■■□□□ 1.23
COL13A1-202ENST00000357811 C7orf25Q9BPX7 421 aa22.77■■□□□ 1.23
COL13A1-202ENST00000357811 NLRC4Q9NPP4 1024 aa22.77■■□□□ 1.23
COL13A1-202ENST00000357811 WNK3Q9BYP7 1800 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 COL22A1Q8NFW1 1626 aaPredicted RBP22.76■■□□□ 1.23
COL13A1-202ENST00000357811 AKR1B1P15121 316 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 CAPN2P17655 700 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 HSP90B2PQ58FF3 399 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.76■■□□□ 1.23
COL13A1-202ENST00000357811 AK8Q96MA6 479 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 CRACR2AQ9BSW2 395 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 PDHBP11177 359 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 RHBDL3P58872 404 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 SPA17Q15506 151 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 MEA1Q16626 185 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 CNNM4Q6P4Q7 775 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 ZNF287Q9HBT7 754 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 ARHGAP20Q9P2F6 1191 aa22.76■■□□□ 1.23
COL13A1-202ENST00000357811 EIF3JO75822 258 aaKnown RBP22.75■■□□□ 1.23
COL13A1-202ENST00000357811 AMPD3Q01432 767 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 TUBB2AQ13885 445 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 ECM1Q16610 540 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 PRR5LQ6MZQ0 368 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 TMC4Q7Z404 712 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 TXLNBQ8N3L3 684 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 LARP4BQ92615 738 aaKnown RBP22.75■■□□□ 1.23
COL13A1-202ENST00000357811 TUBB2BQ9BVA1 445 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 TRIM34Q9BYJ4 488 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 NDST4Q9H3R1 872 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 MPHOSPH10O00566 681 aaKnown RBP22.75■■□□□ 1.23
COL13A1-202ENST00000357811 NCK2O43639 380 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 AKR1B10O60218 316 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 EIF4A3P38919 411 aaKnown RBP22.75■■□□□ 1.23
COL13A1-202ENST00000357811 USP14P54578 494 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 ARID5AQ03989 594 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 IFIH1Q9BYX4 1025 aaKnown RBP22.75■■□□□ 1.23
COL13A1-202ENST00000357811 POLLQ9UGP5 575 aa22.75■■□□□ 1.23
COL13A1-202ENST00000357811 RREB1Q92766 1687 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 SCNN1DP51172 638 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 KCTD19Q17RG1 926 aaPredicted RBP22.74■■□□□ 1.23
COL13A1-202ENST00000357811 KCTD1Q719H9 257 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 NELFCDQ8IXH7 590 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 COG1Q8WTW3 980 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 DDX12PQ92771 950 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 SECISBP2LQ93073 1101 aaKnown RBP22.74■■□□□ 1.23
COL13A1-202ENST00000357811 ZHX3Q9H4I2 956 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 GGA1Q9UJY5 639 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 EDIL3O43854 480 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 MYL1P05976 194 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 NAP1L1P55209 391 aaKnown RBP22.74■■□□□ 1.23
COL13A1-202ENST00000357811 HDAC7Q8WUI4 952 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 LZTS2Q9BRK4 669 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 ROBO3Q96MS0 1386 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 MYH10P35580 1976 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 GPR75-ASB3A0A0A6YYF3 556 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 LRRC53A6NM62 1247 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 SLC7A5Q01650 507 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 FAM114A1Q8IWE2 563 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 FGFBP2Q9BYJ0 223 aa22.74■■□□□ 1.23
COL13A1-202ENST00000357811 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.73■■□□□ 1.23
COL13A1-202ENST00000357811 FAM170AA1A519 330 aa22.73■■□□□ 1.23
COL13A1-202ENST00000357811 FAM196BA6NMK8 535 aa22.73■■□□□ 1.23
COL13A1-202ENST00000357811 BUB1O43683 1085 aa22.73■■□□□ 1.23
COL13A1-202ENST00000357811 ADCY7P51828 1080 aa22.73■■□□□ 1.23
COL13A1-202ENST00000357811 VWA3BQ502W6 1294 aa22.73■■□□□ 1.23
COL13A1-202ENST00000357811 FOXR1Q6PIV2 292 aa22.73■■□□□ 1.23
COL13A1-202ENST00000357811 POLD4Q9HCU8 107 aa22.73■■□□□ 1.23
COL13A1-202ENST00000357811 COL5A3P25940 1745 aaPredicted RBP22.73■■□□□ 1.23
COL13A1-202ENST00000357811 RC3H1Q5TC82 1133 aaKnown RBP22.73■■□□□ 1.23
COL13A1-202ENST00000357811 NOC3LQ8WTT2 800 aaKnown RBP22.73■■□□□ 1.23
COL13A1-202ENST00000357811 NPHP3-ACAD11A0A0J9YXS1 232 aa22.72■■□□□ 1.23
COL13A1-202ENST00000357811 GFPT1Q06210 699 aaPredicted RBP22.72■■□□□ 1.23
COL13A1-202ENST00000357811 NFRKBQ6P4R8 1299 aa22.72■■□□□ 1.23
COL13A1-202ENST00000357811 NUP58Q9BVL2 599 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms