RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 SPDYE2Q495Y8 402 aa29.23■■■□□ 2.27
C1orf228-201ENST00000357508 TCP11X2Q5H9J9 407 aa29.23■■■□□ 2.27
C1orf228-201ENST00000357508 SYDE2Q5VT97 1194 aa29.23■■■□□ 2.27
C1orf228-201ENST00000357508 CCDC47Q96A33 483 aaKnown RBP29.23■■■□□ 2.27
C1orf228-201ENST00000357508 NAP1L4Q99733 375 aaKnown RBP29.23■■■□□ 2.27
C1orf228-201ENST00000357508 BAG1Q99933 345 aaPredicted RBP29.23■■■□□ 2.27
C1orf228-201ENST00000357508 SYNPO2Q9UMS6 1093 aa29.23■■■□□ 2.27
C1orf228-201ENST00000357508 KCNJ18B7U540 433 aa29.22■■■□□ 2.27
C1orf228-201ENST00000357508 BMP3P12645 472 aa29.22■■■□□ 2.27
C1orf228-201ENST00000357508 CCT6AP40227 531 aaKnown RBP29.22■■■□□ 2.27
C1orf228-201ENST00000357508 PMS1P54277 932 aaKnown RBP29.22■■■□□ 2.27
C1orf228-201ENST00000357508 KCNJ12Q14500 433 aa29.22■■■□□ 2.27
C1orf228-201ENST00000357508 AMNQ9BXJ7 453 aa29.22■■■□□ 2.27
C1orf228-201ENST00000357508 ANO3Q9BYT9 981 aa29.22■■■□□ 2.27
C1orf228-201ENST00000357508 EXOC1Q9NV70 894 aa29.22■■■□□ 2.27
C1orf228-201ENST00000357508 COPB1P53618 953 aaKnown RBP29.21■■■□□ 2.27
C1orf228-201ENST00000357508 PDE4DQ08499 809 aa29.21■■■□□ 2.27
C1orf228-201ENST00000357508 BTNL9Q6UXG8 535 aa29.21■■■□□ 2.27
C1orf228-201ENST00000357508 SHTN1A0MZ66 631 aa29.21■■■□□ 2.27
C1orf228-201ENST00000357508 MEIS2O14770 477 aa29.21■■■□□ 2.27
C1orf228-201ENST00000357508 PSMA7O14818 248 aa29.21■■■□□ 2.27
C1orf228-201ENST00000357508 CCP110O43303 1012 aa29.21■■■□□ 2.27
C1orf228-201ENST00000357508 STX10O60499 249 aa29.21■■■□□ 2.27
C1orf228-201ENST00000357508 SNAP25P60880 206 aa29.21■■■□□ 2.27
C1orf228-201ENST00000357508 SV2BQ7L1I2 683 aa29.21■■■□□ 2.27
C1orf228-201ENST00000357508 SNX29Q8TEQ0 813 aa29.21■■■□□ 2.27
C1orf228-201ENST00000357508 CDK5RAP3Q96JB5 506 aa29.21■■■□□ 2.27
C1orf228-201ENST00000357508 NUDT12Q9BQG2 462 aa29.21■■■□□ 2.27
C1orf228-201ENST00000357508 IRF2BP1Q8IU81 584 aa29.2■■■□□ 2.27
C1orf228-201ENST00000357508 ANKRD20A12PQ8NF67 263 aa29.2■■■□□ 2.27
C1orf228-201ENST00000357508 LARP4BQ92615 738 aaKnown RBP29.2■■■□□ 2.27
C1orf228-201ENST00000357508 ITIH6Q6UXX5 1313 aa29.2■■■□□ 2.26
C1orf228-201ENST00000357508 AKR1B15C9JRZ8 316 aaPredicted RBP29.2■■■□□ 2.26
C1orf228-201ENST00000357508 IKQ13123 557 aaPredicted RBP29.2■■■□□ 2.26
C1orf228-201ENST00000357508 AP3B2Q13367 1082 aa29.2■■■□□ 2.26
C1orf228-201ENST00000357508 KRT79Q5XKE5 535 aa29.2■■■□□ 2.26
C1orf228-201ENST00000357508 FBXO11Q86XK2 927 aa29.2■■■□□ 2.26
C1orf228-201ENST00000357508 TSC1Q92574 1164 aa29.2■■■□□ 2.26
C1orf228-201ENST00000357508 DHTKD1Q96HY7 919 aaPredicted RBP29.2■■■□□ 2.26
C1orf228-201ENST00000357508 TAB2Q9NYJ8 693 aa29.2■■■□□ 2.26
C1orf228-201ENST00000357508 USP11P51784 963 aa29.19■■■□□ 2.26
C1orf228-201ENST00000357508 MCM6Q14566 821 aa29.19■■■□□ 2.26
C1orf228-201ENST00000357508 TMEM119Q4V9L6 283 aa29.19■■■□□ 2.26
C1orf228-201ENST00000357508 SMCHD1A6NHR9 2005 aa29.19■■■□□ 2.26
C1orf228-201ENST00000357508 N4BP3O15049 544 aa29.18■■■□□ 2.26
C1orf228-201ENST00000357508 TTI2Q6NXR4 508 aa29.18■■■□□ 2.26
C1orf228-201ENST00000357508 GTPBP4Q9BZE4 634 aaKnown RBP29.18■■■□□ 2.26
C1orf228-201ENST00000357508 VPS16Q9H269 839 aa29.18■■■□□ 2.26
C1orf228-201ENST00000357508 CTIFO43310 598 aaKnown RBP29.18■■■□□ 2.26
C1orf228-201ENST00000357508 RBL2Q08999 1139 aa29.18■■■□□ 2.26
C1orf228-201ENST00000357508 STK4Q13043 487 aa29.18■■■□□ 2.26
C1orf228-201ENST00000357508 PPFIBP1Q86W92 1011 aa29.18■■■□□ 2.26
C1orf228-201ENST00000357508 MTMR14Q8NCE2 650 aa29.18■■■□□ 2.26
C1orf228-201ENST00000357508 RAD54LQ92698 747 aa29.18■■■□□ 2.26
C1orf228-201ENST00000357508 GJA10Q969M2 543 aa29.18■■■□□ 2.26
C1orf228-201ENST00000357508 PANX2Q96RD6 677 aa29.18■■■□□ 2.26
C1orf228-201ENST00000357508 ARHGEF10LQ9HCE6 1279 aa29.18■■■□□ 2.26
C1orf228-201ENST00000357508 GJA3Q9Y6H8 435 aa29.18■■■□□ 2.26
C1orf228-201ENST00000357508 ZNF541Q9H0D2 1346 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 YBX3P16989 372 aaKnown RBP eCLIP29.17■■■□□ 2.26
C1orf228-201ENST00000357508 ECE1P42892 770 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 RBM10P98175 930 aaKnown RBP29.17■■■□□ 2.26
C1orf228-201ENST00000357508 FKBP1CQ5VVH2 108 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 CRYGNQ8WXF5 182 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 MBOAT7Q96N66 472 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 P2RX7Q99572 595 aaKnown RBP29.17■■■□□ 2.26
C1orf228-201ENST00000357508 THAP9Q9H5L6 903 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 CYP3A7-CYP3A51PA0A087WV96 503 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 MYMKA6NI61 221 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 LMNB1P20700 586 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 CYP3A7P24462 503 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 USH1GQ495M9 461 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 REXO1L1PQ8IX06 675 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 SPICE1Q8N0Z3 855 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 KIF18AQ8NI77 898 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 TRIM47Q96LD4 638 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 PCDHA12Q9UN75 941 aa29.17■■■□□ 2.26
C1orf228-201ENST00000357508 MARCH6O60337 910 aa29.16■■■□□ 2.26
C1orf228-201ENST00000357508 FCER1AP12319 257 aa29.16■■■□□ 2.26
C1orf228-201ENST00000357508 RPS12P25398 132 aaKnown RBP29.16■■■□□ 2.26
C1orf228-201ENST00000357508 MMP14P50281 582 aa29.16■■■□□ 2.26
C1orf228-201ENST00000357508 COBLL1Q53SF7 1204 aa29.16■■■□□ 2.26
C1orf228-201ENST00000357508 MCTP2Q6DN12 878 aa29.16■■■□□ 2.26
C1orf228-201ENST00000357508 MOXD1Q6UVY6 613 aa29.16■■■□□ 2.26
C1orf228-201ENST00000357508 VEZTQ9HBM0 779 aa29.16■■■□□ 2.26
C1orf228-201ENST00000357508 CCNE1P24864 410 aa29.15■■■□□ 2.26
C1orf228-201ENST00000357508 PPP1R2P41236 205 aa29.15■■■□□ 2.26
C1orf228-201ENST00000357508 GMPSP49915 693 aaPredicted RBP29.15■■■□□ 2.26
C1orf228-201ENST00000357508 CNNM4Q6P4Q7 775 aa29.15■■■□□ 2.26
C1orf228-201ENST00000357508 KCNK18Q7Z418 384 aa29.15■■■□□ 2.26
C1orf228-201ENST00000357508 ZBED3Q96IU2 234 aaPredicted RBP29.15■■■□□ 2.26
C1orf228-201ENST00000357508 KCNMB3Q9NPA1 279 aa29.15■■■□□ 2.26
C1orf228-201ENST00000357508 MYOZ2Q9NPC6 264 aa29.15■■■□□ 2.26
C1orf228-201ENST00000357508 ZBTB21Q9ULJ3 1066 aa29.15■■■□□ 2.26
C1orf228-201ENST00000357508 PRR12Q9ULL5 1215 aa29.15■■■□□ 2.26
C1orf228-201ENST00000357508 TMX2Q9Y320 296 aa29.15■■■□□ 2.26
C1orf228-201ENST00000357508 ECM1Q16610 540 aa29.15■■■□□ 2.26
C1orf228-201ENST00000357508 KIAA1755Q5JYT7 1200 aa29.15■■■□□ 2.26
C1orf228-201ENST00000357508 ACER1Q8TDN7 264 aa29.15■■■□□ 2.26
C1orf228-201ENST00000357508 P2RX5Q93086 422 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms