RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 PPP2R2DQ66LE6 453 aa10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 TTBK2Q6IQ55 1244 aa10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 NSMFQ6X4W1 530 aa10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 PHOSPHO2Q8TCD6 241 aa10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 ISY1Q9ULR0 285 aaKnown RBP10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 MTCH2Q9Y6C9 303 aa10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 A6NJR5 290 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 NKRFO15226 690 aaKnown RBP eCLIP10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 KPNA6O60684 536 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 IQCF3P0C7M6 154 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 CYP2C9P11712 490 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 EDNRBP24530 442 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 RFC2P35250 354 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 CPT1AP50416 773 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 PTPN11Q06124 597 aaPredicted RBP10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 AAK1Q2M2I8 961 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 NFRKBQ6P4R8 1299 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 RASGRP2Q7LDG7 609 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 CLEC4DQ8WXI8 215 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 CHMP4CQ96CF2 233 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 MTG1Q9BT17 334 aaPredicted RBP10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 FSD1Q9BTV5 496 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 TCP11L1Q9NUJ3 509 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 RAPGEFL1Q9UHV5 662 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 PNMA2Q9UL42 364 aa10.13□□□□□ -0.79
COL4A3BP-202ENST00000357457 ZBBXA8MT70 800 aa10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 NFIBO00712 420 aa10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 GALR2O43603 387 aaPredicted RBP10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 RANBP6O60518 1105 aaKnown RBP10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 TOP1P11387 765 aaKnown RBP10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 ACTN1P12814 892 aa10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 SLC16A2P36021 539 aa10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 TFF2Q03403 129 aa10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 NBPF20Q3BBV1 942 aa10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 SYDE2Q5VT97 1194 aa10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 IL27Q8NEV9 243 aa10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 DNERQ8NFT8 737 aa10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 OTUD7AQ8TE49 926 aaPredicted RBP10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 SLC9A7Q96T83 725 aa10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 TMEM47Q9BQJ4 181 aa10.12□□□□□ -0.79
COL4A3BP-202ENST00000357457 SALL3Q9BXA9 1300 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 EPOPA6NHQ4 379 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 RFXAPO00287 272 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 FGAP02671 866 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 CA3P07451 260 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 MYL3P08590 195 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 SNHG28P0DPA3 235 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 RPS6P62753 249 aaKnown RBP10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 TAP1Q03518 808 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 CCDC96Q2M329 555 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 BRDTQ58F21 947 aaPredicted RBP10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 VPS53Q5VIR6 699 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 DIEXFQ68CQ4 756 aaKnown RBP10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 DEFB128Q7Z7B8 93 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 TICAM2Q86XR7 235 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 RGS22Q8NE09 1264 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 OR6J1Q8NGC5 347 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 C1QTNF1Q9BXJ1 281 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 MAF1Q9H063 256 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 GPHNQ9NQX3 736 aaPredicted RBP10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 COG5Q9UP83 839 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 PCDHB15Q9Y5E8 787 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 PTPRSQ13332 1948 aa10.11□□□□□ -0.79
COL4A3BP-202ENST00000357457 WDR19Q8NEZ3 1342 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 KIAA1217Q5T5P2 1943 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 PTPDC1A2A3K4 754 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 TLL1O43897 1013 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 BAIAP3O94812 1187 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 PDHBP11177 359 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 MX1P20591 662 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 PLA2G5P39877 138 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 GPNMBQ14956 572 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 PPP2R5BQ15173 497 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 CCDC62Q6P9F0 684 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 SLC30A10Q6XR72 485 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 RNF207Q6ZRF8 634 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 SESTD1Q86VW0 696 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 HERC6Q8IVU3 1022 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 HOMEZQ8IX15 550 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 RETREG2Q8NC44 543 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 SCFD2Q8WU76 684 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 TTC14Q96N46 770 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 NECAB3Q96P71 396 aaPredicted RBP10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 CTAGE1Q96RT6 745 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 GPCPD1Q9NPB8 672 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 HELLSQ9NRZ9 838 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 MTMR7Q9Y216 660 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 ARIH1Q9Y4X5 557 aaPredicted RBP10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 TANC1Q9C0D5 1861 aa10.1□□□□□ -0.79
COL4A3BP-202ENST00000357457 RAD50Q92878 1312 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 MYH7BA7E2Y1 1941 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 B4DLN1 442 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 KIF28PB7ZC32 967 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 LPXNO60711 386 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 ARHGEF15O94989 841 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 TXNP10599 105 aaKnown RBP10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 CALML3P27482 149 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 KCNQ1P51787 676 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 MRPL12P52815 198 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms