RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 NOVA2Q9UNW9 492 aaKnown RBP13.82□□□□□ -0.2
BDNF-202ENST00000356660 CLTCQ00610 1675 aaKnown RBP13.82□□□□□ -0.2
BDNF-202ENST00000356660 LSP1P33241 339 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 LONP1P36776 959 aaKnown RBP13.82□□□□□ -0.2
BDNF-202ENST00000356660 PPP2R5BQ15173 497 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 GKAP1Q5VSY0 366 aaPredicted RBP13.82□□□□□ -0.2
BDNF-202ENST00000356660 MAPKAPK5Q8IW41 473 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 DISC1Q9NRI5 854 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 RBM12Q9NTZ6 932 aaKnown RBP13.82□□□□□ -0.2
BDNF-202ENST00000356660 CAPN6Q9Y6Q1 641 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 XDHP47989 1333 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 IFNAR2P48551 515 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 KCTD19Q17RG1 926 aaPredicted RBP13.82□□□□□ -0.2
BDNF-202ENST00000356660 ENAHQ8N8S7 591 aaPredicted RBP13.82□□□□□ -0.2
BDNF-202ENST00000356660 CCT8L2Q96SF2 557 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 AP1M1Q9BXS5 423 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 KLC4Q9NSK0 619 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 SAMD15Q9P1V8 674 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 GSTO1P78417 241 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 RBM26Q5T8P6 1007 aaKnown RBP13.81□□□□□ -0.2
BDNF-202ENST00000356660 NLRP14Q86W24 1093 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 SPATS2Q86XZ4 545 aaKnown RBP13.81□□□□□ -0.2
BDNF-202ENST00000356660 OR2W6PQ8NHA6 318 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 MICAL1Q8TDZ2 1067 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 KANSL2Q9H9L4 492 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 ADAMTS13Q76LX8 1427 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 PXDNQ92626 1479 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 ZSCAN5CA6NGD5 496 aaPredicted RBP13.81□□□□□ -0.2
BDNF-202ENST00000356660 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 PPP1R37O75864 691 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 UFL1O94874 794 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 CCNE1P24864 410 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 DCAF17Q5H9S7 520 aaPredicted RBP13.81□□□□□ -0.2
BDNF-202ENST00000356660 NKX2-3Q8TAU0 364 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 TBC1D5Q92609 795 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 LSM14BQ9BX40 385 aaKnown RBP13.81□□□□□ -0.2
BDNF-202ENST00000356660 PRPF3O43395 683 aaKnown RBP13.81□□□□□ -0.2
BDNF-202ENST00000356660 PLCG1P19174 1290 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 HLFQ16534 295 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 SYCP3Q8IZU3 236 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 KIRREL3Q8IZU9 778 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 ZNF513Q8N8E2 541 aaPredicted RBP13.81□□□□□ -0.2
BDNF-202ENST00000356660 MGARPQ8TDB4 240 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 THAP9Q9H5L6 903 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 ADAMTS1Q9UHI8 967 aa13.81□□□□□ -0.2
BDNF-202ENST00000356660 LRRC53A6NM62 1247 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 FCER1AP12319 257 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 HDLBPQ00341 1268 aaKnown RBP13.8□□□□□ -0.2
BDNF-202ENST00000356660 KRT79Q5XKE5 535 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 ZNF804AQ7Z570 1209 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 ZNF473Q8WTR7 871 aaKnown RBP13.8□□□□□ -0.2
BDNF-202ENST00000356660 STK38LQ9Y2H1 464 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 KRIT1O00522 736 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 TFAP4Q01664 338 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 PARP10Q53GL7 1025 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 NT5DC1Q5TFE4 455 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 KSR1Q8IVT5 923 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 CNBD1Q8NA66 436 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 RETREG2Q8NC44 543 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 NDST4Q9H3R1 872 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 C6orf50Q9HD87 102 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 JCADQ9P266 1359 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 TMEM110-MUSTN1A8MSY1 372 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 PALMO75781 387 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 TRAPPC3LQ5T215 181 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.8□□□□□ -0.2
BDNF-202ENST00000356660 HEG1Q9ULI3 1381 aa13.8□□□□□ -0.2
BDNF-202ENST00000356660 RPS8P62241 208 aaKnown RBP13.8□□□□□ -0.2
BDNF-202ENST00000356660 IFI16Q16666 785 aaKnown RBP13.8□□□□□ -0.2
BDNF-202ENST00000356660 DHTKD1Q96HY7 919 aaPredicted RBP13.8□□□□□ -0.2
BDNF-202ENST00000356660 GOLGA6L10A0A0M3HER8 536 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 RPS6KA5O75582 802 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 TMOD1P28289 359 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 GCKP35557 465 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 PMS1P54277 932 aaKnown RBP13.79□□□□□ -0.2
BDNF-202ENST00000356660 CASP7P55210 303 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 ATP2C1P98194 919 aaPredicted RBP13.79□□□□□ -0.2
BDNF-202ENST00000356660 PLS1Q14651 629 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 ANKRD40Q6AI12 368 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 PEX26Q7Z412 305 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 TSEN2Q8NCE0 465 aaKnown RBP13.79□□□□□ -0.2
BDNF-202ENST00000356660 TGFBRAP1Q8WUH2 860 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 STAG1Q8WVM7 1258 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 NYXQ9GZU5 481 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 ASIC2Q16515 512 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 PAPD7Q5XG87 772 aaKnown RBP13.79□□□□□ -0.2
BDNF-202ENST00000356660 ADSSL1Q8N142 457 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 FBXL16Q8N461 479 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 CPVLQ9H3G5 476 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 KCNK9Q9NPC2 374 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 TSKSQ9UJT2 592 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 ATP8A1Q9Y2Q0 1164 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 RCCD1A6NED2 376 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 TECPR2O15040 1411 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 CTNND1O60716 968 aaKnown RBP13.79□□□□□ -0.2
BDNF-202ENST00000356660 SLC1A4P43007 532 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 AARSP49588 968 aaKnown RBP eCLIP13.79□□□□□ -0.2
BDNF-202ENST00000356660 AP1ARQ63HQ0 302 aa13.79□□□□□ -0.2
BDNF-202ENST00000356660 CTNNBL1Q8WYA6 563 aaPredicted RBP13.79□□□□□ -0.2
BDNF-202ENST00000356660 PKD2L1Q9P0L9 805 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms