RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.38■■□□□ 1.97
CHKA-202ENST00000356135 POLR3EQ9NVU0 708 aa27.38■■□□□ 1.97
CHKA-202ENST00000356135 ARHGAP4P98171 946 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 CNTN2Q02246 1040 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 PTPAQ15257 358 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 TPRNQ4KMQ1 711 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 SAMD3Q8N6K7 520 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 LINC00301Q8NCQ3 95 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 SHCBP1Q8NEM2 672 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 CRYGNQ8WXF5 182 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 SPATA32Q96LK8 384 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 TDP2O95551 362 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 COPB2P35606 906 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 SREBF1P36956 1147 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 NASPP49321 788 aaPredicted RBP27.37■■□□□ 1.97
CHKA-202ENST00000356135 TEX2Q8IWB9 1127 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 MMP19Q99542 508 aa27.37■■□□□ 1.97
CHKA-202ENST00000356135 DDX49Q9Y6V7 483 aaKnown RBP27.37■■□□□ 1.97
CHKA-202ENST00000356135 PGK2P07205 417 aa27.36■■□□□ 1.97
CHKA-202ENST00000356135 EIF2AK2P19525 551 aaKnown RBP27.36■■□□□ 1.97
CHKA-202ENST00000356135 MAP2K2P36507 400 aa27.36■■□□□ 1.97
CHKA-202ENST00000356135 C1QTNF8P60827 252 aa27.36■■□□□ 1.97
CHKA-202ENST00000356135 CSPP1Q1MSJ5 1256 aa27.36■■□□□ 1.97
CHKA-202ENST00000356135 CCAR1Q8IX12 1150 aaKnown RBP27.36■■□□□ 1.97
CHKA-202ENST00000356135 RMDN3Q96TC7 470 aa27.36■■□□□ 1.97
CHKA-202ENST00000356135 RCOR1Q9UKL0 485 aa27.36■■□□□ 1.97
CHKA-202ENST00000356135 RBBP6Q7Z6E9 1792 aaKnown RBP27.36■■□□□ 1.97
CHKA-202ENST00000356135 TBC1D8O95759 1140 aa27.35■■□□□ 1.97
CHKA-202ENST00000356135 STK38Q15208 465 aa27.35■■□□□ 1.97
CHKA-202ENST00000356135 REM2Q8IYK8 340 aaPredicted RBP27.35■■□□□ 1.97
CHKA-202ENST00000356135 IL31RAQ8NI17 732 aa27.35■■□□□ 1.97
CHKA-202ENST00000356135 SCAND2PQ9GZW5 306 aaPredicted RBP27.35■■□□□ 1.97
CHKA-202ENST00000356135 ALDH1A1P00352 501 aa27.35■■□□□ 1.97
CHKA-202ENST00000356135 MARCKSP29966 332 aaPredicted RBP27.35■■□□□ 1.97
CHKA-202ENST00000356135 MYH7BA7E2Y1 1941 aa27.34■■□□□ 1.97
CHKA-202ENST00000356135 MBD3O95983 291 aa27.34■■□□□ 1.97
CHKA-202ENST00000356135 FCER1AP12319 257 aa27.34■■□□□ 1.97
CHKA-202ENST00000356135 KCTD2Q14681 263 aa27.34■■□□□ 1.97
CHKA-202ENST00000356135 SLC39A14Q15043 492 aa27.34■■□□□ 1.97
CHKA-202ENST00000356135 ARHGEF16Q5VV41 709 aa27.34■■□□□ 1.97
CHKA-202ENST00000356135 PXMP2Q9NR77 195 aa27.34■■□□□ 1.97
CHKA-202ENST00000356135 PFASO15067 1338 aa27.34■■□□□ 1.97
CHKA-202ENST00000356135 RPTORQ8N122 1335 aa27.34■■□□□ 1.97
CHKA-202ENST00000356135 HSPA6P17066 643 aa27.33■■□□□ 1.97
CHKA-202ENST00000356135 USP11P51784 963 aa27.33■■□□□ 1.97
CHKA-202ENST00000356135 PTGDRQ13258 359 aa27.33■■□□□ 1.97
CHKA-202ENST00000356135 GPR142Q7Z601 462 aa27.33■■□□□ 1.97
CHKA-202ENST00000356135 CYP2W1Q8TAV3 490 aa27.33■■□□□ 1.97
CHKA-202ENST00000356135 TMEM60Q9H2L4 133 aa27.33■■□□□ 1.97
CHKA-202ENST00000356135 ASTN1O14525 1302 aa27.33■■□□□ 1.97
CHKA-202ENST00000356135 PCNTO95613 3336 aa27.33■■□□□ 1.97
CHKA-202ENST00000356135 POTEB2H3BUK9 544 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 SLC37A4O43826 429 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 TRPA1O75762 1119 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 YEATS4O95619 227 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 GSE1Q14687 1217 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 C4orf32Q8N8J7 132 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 GPT2Q8TD30 523 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 UIMC1Q96RL1 719 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 SOWAHBA6NEL2 793 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 FAM86B1E9PN63 330 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 SPTLC2O15270 562 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 GADD45BO75293 160 aaPredicted RBP27.32■■□□□ 1.96
CHKA-202ENST00000356135 FAM86B2P0C5J1 330 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 PGM5Q15124 567 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.32■■□□□ 1.96
CHKA-202ENST00000356135 EHMT1Q9H9B1 1298 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 RNF186Q9NXI6 227 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 ELP1O95163 1332 aa27.32■■□□□ 1.96
CHKA-202ENST00000356135 CYP3A4P08684 503 aa27.31■■□□□ 1.96
CHKA-202ENST00000356135 POTEDQ86YR6 584 aa27.31■■□□□ 1.96
CHKA-202ENST00000356135 FAM133AQ8N9E0 248 aa27.31■■□□□ 1.96
CHKA-202ENST00000356135 PDCD2LQ9BRP1 358 aa27.31■■□□□ 1.96
CHKA-202ENST00000356135 MYCLP12524 364 aaPredicted RBP27.3■■□□□ 1.96
CHKA-202ENST00000356135 ZNF76P36508 570 aa27.3■■□□□ 1.96
CHKA-202ENST00000356135 PPP4R3AQ6IN85 833 aa27.3■■□□□ 1.96
CHKA-202ENST00000356135 MAF1Q9H063 256 aa27.3■■□□□ 1.96
CHKA-202ENST00000356135 DDX25Q9UHL0 483 aaKnown RBP27.3■■□□□ 1.96
CHKA-202ENST00000356135 CEP131Q9UPN4 1083 aa27.3■■□□□ 1.96
CHKA-202ENST00000356135 FRMPD4Q14CM0 1322 aa27.3■■□□□ 1.96
CHKA-202ENST00000356135 DNAJC25-GNG10A0A024R161 153 aa27.3■■□□□ 1.96
CHKA-202ENST00000356135 PTPREP23469 700 aa27.3■■□□□ 1.96
CHKA-202ENST00000356135 MAPK4P31152 587 aa27.3■■□□□ 1.96
CHKA-202ENST00000356135 MRPS9P82933 396 aaKnown RBP27.3■■□□□ 1.96
CHKA-202ENST00000356135 PLEKHH3Q7Z736 793 aa27.3■■□□□ 1.96
CHKA-202ENST00000356135 NSUN6Q8TEA1 469 aaKnown RBP27.3■■□□□ 1.96
CHKA-202ENST00000356135 PCDHA7Q9UN72 937 aa27.3■■□□□ 1.96
CHKA-202ENST00000356135 LCTP09848 1927 aa27.29■■□□□ 1.96
CHKA-202ENST00000356135 ADORA2AP29274 412 aa27.29■■□□□ 1.96
CHKA-202ENST00000356135 CIITAP33076 1130 aa27.29■■□□□ 1.96
CHKA-202ENST00000356135 ME1P48163 572 aa27.29■■□□□ 1.96
CHKA-202ENST00000356135 GRIN1Q05586 938 aa27.29■■□□□ 1.96
CHKA-202ENST00000356135 PRR16Q569H4 304 aa27.29■■□□□ 1.96
CHKA-202ENST00000356135 GJA10Q969M2 543 aa27.29■■□□□ 1.96
CHKA-202ENST00000356135 FGD4Q96M96 766 aa27.29■■□□□ 1.96
CHKA-202ENST00000356135 IVNS1ABPQ9Y6Y0 642 aa27.29■■□□□ 1.96
CHKA-202ENST00000356135 CYP3A7-CYP3A51PA0A087WV96 503 aa27.28■■□□□ 1.96
CHKA-202ENST00000356135 NEMFO60524 1076 aa27.28■■□□□ 1.96
CHKA-202ENST00000356135 COBLO75128 1261 aa27.28■■□□□ 1.96
CHKA-202ENST00000356135 NR3C2P08235 984 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms