RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 RIN2Q8WYP3 895 aaPredicted RBP13.5□□□□□ -0.25
SIRPA-201ENST00000356025 PNKPQ96T60 521 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 LSM14BQ9BX40 385 aaKnown RBP13.5□□□□□ -0.25
SIRPA-201ENST00000356025 BCCIPQ9P287 314 aaKnown RBP eCLIP13.5□□□□□ -0.25
SIRPA-201ENST00000356025 FHOD1Q9Y613 1164 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 POTEB3A0JP26 581 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 POTECB2RU33 542 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 TCP10L2B9ZVM9 353 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 CLIC2O15247 247 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 NFIAQ12857 509 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 ZSCAN26Q16670 478 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 POTEBQ6S5H4 581 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 CUL5Q93034 780 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 PANK4Q9NVE7 773 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 DAGLAQ9Y4D2 1042 aa13.5□□□□□ -0.25
SIRPA-201ENST00000356025 LGALS16A8MUM7 142 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 TBX2Q13207 712 aaPredicted RBP13.49□□□□□ -0.25
SIRPA-201ENST00000356025 TBC1D16Q8TBP0 767 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 ALS2CR12Q96Q35 445 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 LACRTQ9GZZ8 138 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 HOMER2Q9NSB8 354 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 PACSIN2Q9UNF0 486 aaPredicted RBP13.49□□□□□ -0.25
SIRPA-201ENST00000356025 MYMKA6NI61 221 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 PPEF1O14829 653 aaPredicted RBP13.49□□□□□ -0.25
SIRPA-201ENST00000356025 SORBS3O60504 671 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 SASH3O75995 380 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 SND1Q7KZF4 910 aaKnown RBP eCLIP13.49□□□□□ -0.25
SIRPA-201ENST00000356025 KLHL7Q8IXQ5 586 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 ADGRF4Q8IZF3 695 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 SH2D3AQ9BRG2 576 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 GBP3Q9H0R5 595 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.49□□□□□ -0.25
SIRPA-201ENST00000356025 TRPM3Q9HCF6 1732 aaPredicted RBP13.49□□□□□ -0.25
SIRPA-201ENST00000356025 MYH2Q9UKX2 1941 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 FGFR1OPO95684 399 aaKnown RBP13.49□□□□□ -0.25
SIRPA-201ENST00000356025 FTCDO95954 541 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 SLFN13Q68D06 897 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 ADAT2Q7Z6V5 191 aaKnown RBP13.49□□□□□ -0.25
SIRPA-201ENST00000356025 TAF4BQ92750 862 aa13.49□□□□□ -0.25
SIRPA-201ENST00000356025 RCAN1P53805 252 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 TRIM14Q14142 442 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 FAM26FQ5R3K3 315 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 CDKAL1Q5VV42 579 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 TPH2Q8IWU9 490 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 MYOCDQ8IZQ8 938 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 CPXCR1Q8N123 301 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 TEKT1Q969V4 418 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 MMS19Q96T76 1030 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 MTA3Q9BTC8 594 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 NDST4Q9H3R1 872 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 TMEM51Q9NW97 253 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 CWC15Q9P013 229 aaKnown RBP13.48□□□□□ -0.25
SIRPA-201ENST00000356025 TRIM66O15016 1216 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 TBCAO75347 108 aaKnown RBP13.48□□□□□ -0.25
SIRPA-201ENST00000356025 GFPT1Q06210 699 aaPredicted RBP13.48□□□□□ -0.25
SIRPA-201ENST00000356025 E2F4Q16254 413 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 CERKLQ49MI3 558 aaPredicted RBP13.48□□□□□ -0.25
SIRPA-201ENST00000356025 SBK1Q52WX2 424 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 CCDC51Q96ER9 411 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 COL1A1P02452 1464 aaPredicted RBP13.48□□□□□ -0.25
SIRPA-201ENST00000356025 FAM237AA0A1B0GTK4 181 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 NKRFO15226 690 aaKnown RBP eCLIP13.48□□□□□ -0.251e-6■■■■□ 21.8
SIRPA-201ENST00000356025 TTLL1O95922 423 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 H2AFXP16104 143 aaPredicted RBP13.48□□□□□ -0.25
SIRPA-201ENST00000356025 SEPT2Q15019 361 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 NAALADL2Q58DX5 795 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 NT5DC1Q5TFE4 455 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 NEDD1Q8NHV4 660 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 KIFC2Q96AC6 838 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 DNAJC5Q9H3Z4 198 aa13.48□□□□□ -0.25
SIRPA-201ENST00000356025 LIMA1Q9UHB6 759 aaKnown RBP13.48□□□□□ -0.25
SIRPA-201ENST00000356025 POTEFA5A3E0 1075 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 GUCY2FP51841 1108 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 CCDC93Q567U6 631 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 POTEEQ6S8J3 1075 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 CCDC84Q86UT8 332 aaPredicted RBP13.47□□□□□ -0.25
SIRPA-201ENST00000356025 PIGOQ8TEQ8 1089 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 LZTS2Q9BRK4 669 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 TRIM31Q9BZY9 425 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 HAUS4Q9H6D7 363 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 LRRC53A6NM62 1247 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 GCNT3O95395 438 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 PDHBP11177 359 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 EEF1GP26641 437 aaKnown RBP13.47□□□□□ -0.25
SIRPA-201ENST00000356025 SYCP3Q8IZU3 236 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 TXLNBQ8N3L3 684 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 IBSPP21815 317 aaPredicted RBP13.47□□□□□ -0.25
SIRPA-201ENST00000356025 ADAM9Q13443 819 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 SLC35G1Q2M3R5 365 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 MIGA2Q7L4E1 593 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 CCDC65Q8IXS2 484 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 RTFDC1Q9BY42 306 aaPredicted RBP13.47□□□□□ -0.25
SIRPA-201ENST00000356025 GOLPH3Q9H4A6 298 aa13.47□□□□□ -0.25
SIRPA-201ENST00000356025 TMEM110-MUSTN1A8MSY1 372 aa13.46□□□□□ -0.25
SIRPA-201ENST00000356025 PRPF6O94906 941 aaKnown RBP13.46□□□□□ -0.25
SIRPA-201ENST00000356025 EHHADHQ08426 723 aa13.46□□□□□ -0.25
SIRPA-201ENST00000356025 NFRKBQ6P4R8 1299 aa13.46□□□□□ -0.25
SIRPA-201ENST00000356025 SH3RF1Q7Z6J0 888 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms