RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 C1orf228Q6PIY5 440 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 PRR23BQ6ZRT6 265 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 UNC5CLQ8IV45 518 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 SEPT12Q8IYM1 358 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 MAFAQ8NHW3 353 aaPredicted RBP2.59□□□□□ -2
SMARCAD1-201ENST00000354268 STAMQ92783 540 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 SLC2A13Q96QE2 648 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.59□□□□□ -21e-10■■■□□ 16
SMARCAD1-201ENST00000354268 HOXC10Q9NYD6 342 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 STMN3Q9NZ72 180 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 FAM8A1Q9UBU6 413 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 KDM5DQ9BY66 1539 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 SYNRGQ9UMZ2 1314 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 CC2D2AQ9P2K1 1620 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 TRAPPC8Q9Y2L5 1435 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 DLC1Q96QB1 1528 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 S100BP04271 92 aaPredicted RBP2.59□□□□□ -2
SMARCAD1-201ENST00000354268 CD72P21854 359 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 BMP8BP34820 402 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 STT3AP46977 705 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 FCGRTP55899 365 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 DDR1Q08345 913 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 SEMA5AQ13591 1074 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 RABEP1Q15276 862 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 ATP13A4Q4VNC1 1196 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 LCE2AQ5TA79 106 aaPredicted RBP2.59□□□□□ -2
SMARCAD1-201ENST00000354268 ZNF574Q6ZN55 896 aaPredicted RBP2.59□□□□□ -2
SMARCAD1-201ENST00000354268 TMEM151BQ8IW70 566 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 CLASRPQ8N2M8 674 aaKnown RBP2.59□□□□□ -2
SMARCAD1-201ENST00000354268 FAM133AQ8N9E0 248 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 Q8NA96 180 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 B3GALNT2Q8NCR0 500 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 GPR101Q96P66 508 aaPredicted RBP2.59□□□□□ -2
SMARCAD1-201ENST00000354268 ISCA1Q9BUE6 129 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 NDFIP2Q9NV92 336 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 ZIM2Q9NZV7 527 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 PNMA8BQ9ULN7 279 aaPredicted RBP2.59□□□□□ -2
SMARCAD1-201ENST00000354268 CARMIL1Q5VZK9 1371 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 NUP160Q12769 1436 aa2.59□□□□□ -2
SMARCAD1-201ENST00000354268 IDSB3KWA1 339 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 LCE2BO14633 110 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 ARHGAP6O43182 974 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 IRAK2O43187 625 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 FARP2O94887 1054 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 RPLP2P05387 115 aaKnown RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 RAG1P15918 1043 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 IDSP22304 550 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 SMTNP53814 917 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 DGKKQ5KSL6 1271 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 PPP4R3AQ6IN85 833 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 LBX2Q6XYB7 198 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 HS2ST1Q7LGA3 356 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 KRT28Q7Z3Y7 464 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 C12orf40Q86WS4 652 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 RTKN2Q8IZC4 609 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 HOXB13Q92826 284 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 ACSF2Q96CM8 615 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 USB1Q9BQ65 265 aaKnown RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 EFHD1Q9BUP0 239 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 SLC52A2Q9HAB3 445 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 CSADQ9Y600 493 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 COL15A1P39059 1388 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 CD109Q6YHK3 1445 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 A0A087WZ62 844 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 E2F8A0AVK6 867 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 LRCH4O75427 683 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 IREB2P48200 963 aaKnown RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 NEK3P51956 506 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 KCNQ4P56696 695 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 ELF2Q15723 593 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 HAUS6Q7Z4H7 955 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 AGBL5Q8NDL9 886 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 SH3KBP1Q96B97 665 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 MFSD3Q96ES6 412 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 LRCH3Q96II8 777 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 ZNF496Q96IT1 587 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 FDXACB1Q9BRP7 624 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 WDR83Q9BRX9 315 aaKnown RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 CDT1Q9H211 546 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 CCSER2Q9H7U1 834 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 CYLDQ9NQC7 956 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 TMOD3Q9NYL9 352 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 SERPINB13Q9UIV8 391 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 PPM1HQ9ULR3 514 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 APOBEC2Q9Y235 224 aaKnown RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 MEN1O00255 615 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 ARHGEF9O43307 516 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 SCG5P05408 212 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 RLBP1P12271 317 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 RHOQP17081 205 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 EIF4A3P38919 411 aaKnown RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 ERVFC1P60507 584 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 RAPGEF1Q13905 1077 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 MTERF2Q49AM1 385 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 AASDHQ4L235 1098 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 SLC36A4Q6YBV0 504 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 FGD2Q7Z6J4 655 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 CCDC117Q8IWD4 279 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 ZSCAN29Q8IWY8 852 aaPredicted RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms