RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SCAND2PQ9GZW5 306 aaPredicted RBP6.61□□□□□ -1.35
RFC1-201ENST00000349703 SH2B1Q9NRF2 756 aaPredicted RBP6.61□□□□□ -1.35
RFC1-201ENST00000349703 ABI2Q9NYB9 513 aaPredicted RBP6.61□□□□□ -1.35
RFC1-201ENST00000349703 NSFL1CQ9UNZ2 370 aaKnown RBP6.61□□□□□ -1.35
RFC1-201ENST00000349703 PLAAQ9Y263 795 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 ADGRL1O94910 1474 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 MAGI2Q86UL8 1455 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 TCEA3O75764 348 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 ITGA6P23229 1130 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 ATP8B2P98198 1209 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 TDGQ13569 410 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 PLEKHG6Q3KR16 790 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 SYTL1Q8IYJ3 562 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 GLG1Q92896 1179 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 METRNQ9UJH8 293 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 ZMIZ1Q9ULJ6 1067 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 ANGPTL3Q9Y5C1 460 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 PTCH2Q9Y6C5 1203 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 WDR7Q9Y4E6 1490 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 CTAGE5O15320 804 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 RAPGEF3O95398 923 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 PARNO95453 639 aaKnown RBP6.61□□□□□ -1.35
RFC1-201ENST00000349703 RECKO95980 971 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 PDGFRBP09619 1106 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 SRGAP2BP0DMP2 458 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 ZSCAN22P10073 491 aaPredicted RBP6.61□□□□□ -1.35
RFC1-201ENST00000349703 RUNX2Q13950 521 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 ANKRD1Q15327 319 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 WIPI1Q5MNZ9 446 aaPredicted RBP6.61□□□□□ -1.35
RFC1-201ENST00000349703 TMC4Q7Z404 712 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 SCUBE3Q8IX30 993 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 PPM1KQ8N3J5 372 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 KHSRPQ92945 711 aaKnown RBP eCLIP6.61□□□□□ -1.356e-7■■■■□ 21.8
RFC1-201ENST00000349703 XAGE2Q96GT9 111 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 RRN3Q9NYV6 651 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 EMILIN1Q9Y6C2 1016 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 KIF24Q5T7B8 1368 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 FAM205CA6NFA0 338 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 TBX3O15119 743 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 SCGB1D2O95969 90 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 KIF5BP33176 963 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 EPHB1P54762 984 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 AMPD2Q01433 879 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 ZNF527Q8NB42 609 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 PJA1Q8NG27 643 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 HDAC2Q92769 488 aaKnown RBP6.61□□□□□ -1.35
RFC1-201ENST00000349703 GDAP1L1Q96MZ0 367 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 OSMRQ99650 979 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 LZTS1Q9Y250 596 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 H3BQ06 376 aaPredicted RBP6.6□□□□□ -1.35
RFC1-201ENST00000349703 MICAL2O94851 1124 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 ERLIN2O94905 339 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 PRKAG1P54619 331 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 AIMP1Q12904 312 aaKnown RBP6.6□□□□□ -1.35
RFC1-201ENST00000349703 IKBKEQ14164 716 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 DDX42Q86XP3 938 aaKnown RBP eCLIP6.6□□□□□ -1.35
RFC1-201ENST00000349703 SLC17A8Q8NDX2 589 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 KCNG4Q8TDN1 519 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 BRF1Q92994 677 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 E2F7Q96AV8 911 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 UCN2Q96RP3 112 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 SEC62Q99442 399 aaKnown RBP6.6□□□□□ -1.35
RFC1-201ENST00000349703 RNF38Q9H0F5 515 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 RSPH9Q9H1X1 276 aaPredicted RBP6.6□□□□□ -1.35
RFC1-201ENST00000349703 RIC8BQ9NVN3 520 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 TNNQ9UQP3 1299 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 PCDHB14Q9Y5E9 798 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.6□□□□□ -1.35
RFC1-201ENST00000349703 ARHGEF5Q12774 1597 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 CROCC2H7BZ55 1655 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 DUOX2Q9NRD8 1548 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 STX6O43752 255 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 GNAI3P08754 354 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 TXLNAP40222 546 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 CCDC178Q5BJE1 867 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 KLHL17Q6TDP4 642 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 TTC7BQ86TV6 843 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 CCDC191Q8NCU4 936 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 NUDT8Q8WV74 236 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 SETDB2Q96T68 719 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 SLC13A1Q9BZW2 595 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 TMPRSS4Q9NRS4 437 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 FOXD3Q9UJU5 478 aaPredicted RBP6.6□□□□□ -1.35
RFC1-201ENST00000349703 GRIN2AQ12879 1464 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 PDHA1P08559 390 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 ETFBP38117 255 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 CCT4P50991 539 aaKnown RBP6.6□□□□□ -1.35
RFC1-201ENST00000349703 CCDC129Q6ZRS4 1044 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 CEP57L1Q8IYX8 460 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 AGBL1Q96MI9 1066 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 LRRCC1Q9C099 1032 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 MKNK2Q9HBH9 465 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 ZFATQ9P243 1243 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 EDARQ9UNE0 448 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 POTEB2H3BUK9 544 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 PDE6AP16499 860 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 DLGAP5Q15398 846 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 MAPK11Q15759 364 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 SPECC1Q5M775 1068 aa6.6□□□□□ -1.35
RFC1-201ENST00000349703 PRAMEF9Q5VWM5 478 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms