RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 KIAA1468Q9P260 1216 aa12.45□□□□□ -0.42
ECM1-201ENST00000346569 ZNF214Q9UL59 606 aaPredicted RBP12.45□□□□□ -0.42
ECM1-201ENST00000346569 NFIBO00712 420 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 ACTN4O43707 911 aaKnown RBP12.44□□□□□ -0.42
ECM1-201ENST00000346569 ITGBL1O95965 494 aaPredicted RBP12.44□□□□□ -0.42
ECM1-201ENST00000346569 ALAS1P13196 640 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
ECM1-201ENST00000346569 E2F4Q16254 413 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 CALCRLQ16602 461 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 Q4G0T1 1027 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 LBX2Q6XYB7 198 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 SH3RF1Q7Z6J0 888 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 PIAS4Q8N2W9 510 aaPredicted RBP12.44□□□□□ -0.42
ECM1-201ENST00000346569 DNAJC5GQ8N7S2 189 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 OPTNQ96CV9 577 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 AK8Q96MA6 479 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 TRERF1Q96PN7 1200 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 MAF1Q9H063 256 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 KCNMB3Q9NPA1 279 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 DDX25Q9UHL0 483 aaKnown RBP12.44□□□□□ -0.42
ECM1-201ENST00000346569 SERTAD1Q9UHV2 236 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 RIPK3Q9Y572 518 aa12.44□□□□□ -0.42
ECM1-201ENST00000346569 OTOFQ9HC10 1997 aa12.43□□□□□ -0.42
ECM1-201ENST00000346569 CCDC192P0DO97 292 aa12.43□□□□□ -0.42
ECM1-201ENST00000346569 CDC25AP30304 524 aa12.43□□□□□ -0.42
ECM1-201ENST00000346569 MRE11P49959 708 aa12.43□□□□□ -0.42
ECM1-201ENST00000346569 TYRO3Q06418 890 aa12.43□□□□□ -0.42
ECM1-201ENST00000346569 GPAT2Q6NUI2 795 aa12.43□□□□□ -0.42
ECM1-201ENST00000346569 FCHSD1Q86WN1 690 aa12.43□□□□□ -0.42
ECM1-201ENST00000346569 LENG9Q96B70 501 aa12.43□□□□□ -0.42
ECM1-201ENST00000346569 GRPEL1Q9HAV7 217 aa12.43□□□□□ -0.42
ECM1-201ENST00000346569 GBA2Q9HCG7 927 aaPredicted RBP12.43□□□□□ -0.42
ECM1-201ENST00000346569 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.43□□□□□ -0.42
ECM1-201ENST00000346569 USP25Q9UHP3 1055 aa12.43□□□□□ -0.42
ECM1-201ENST00000346569 TUBE1Q9UJT0 475 aa12.43□□□□□ -0.42
ECM1-201ENST00000346569 CTDP1Q9Y5B0 961 aaPredicted RBP12.43□□□□□ -0.42
ECM1-201ENST00000346569 MYH7BA7E2Y1 1941 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 PARP14Q460N5 1801 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 FAM86B1E9PN63 330 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 TBX3O15119 743 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 FAM86B2P0C5J1 330 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 SLFN14P0C7P3 912 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 XRCC6P12956 609 aaKnown RBP eCLIP12.42□□□□□ -0.42
ECM1-201ENST00000346569 DEKP35659 375 aaKnown RBP12.42□□□□□ -0.42
ECM1-201ENST00000346569 STAT3P40763 770 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 TECP42680 631 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 TXKP42681 527 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 TKFCQ3LXA3 575 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 CST9Q5W186 159 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 KANK3Q6NY19 840 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 GADL1Q6ZQY3 521 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 FASTKD5Q7L8L6 764 aaKnown RBP12.42□□□□□ -0.42
ECM1-201ENST00000346569 PDILTQ8N807 584 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 SMC1BQ8NDV3 1235 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 CNNM3Q8NE01 707 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 ETNPPLQ8TBG4 499 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 SYTL5Q8TDW5 730 aaPredicted RBP12.42□□□□□ -0.42
ECM1-201ENST00000346569 MMTAG2Q9BU76 263 aaKnown RBP12.42□□□□□ -0.42
ECM1-201ENST00000346569 COL20A1Q9P218 1284 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 AGTPBP1Q9UPW5 1226 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 PTPRFP10586 1907 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 RPTORQ8N122 1335 aa12.42□□□□□ -0.42
ECM1-201ENST00000346569 IGLV3-22A0A075B6J6 115 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 PP2D1A8MPX8 630 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 FOXN1O15353 648 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 SARSP49591 514 aaKnown RBP12.41□□□□□ -0.42
ECM1-201ENST00000346569 RPS6P62753 249 aaKnown RBP12.41□□□□□ -0.42
ECM1-201ENST00000346569 L1TD1Q5T7N2 865 aaKnown RBP12.41□□□□□ -0.42
ECM1-201ENST00000346569 SNRNP48Q6IEG0 339 aaKnown RBP12.41□□□□□ -0.42
ECM1-201ENST00000346569 SASS6Q6UVJ0 657 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 MB21D1Q8N884 522 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 C2orf69Q8N8R5 385 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 CYP2W1Q8TAV3 490 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 SPATA20Q8TB22 786 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 ERCC4Q92889 916 aaPredicted RBP12.41□□□□□ -0.42
ECM1-201ENST00000346569 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 PYM1Q9BRP8 204 aaKnown RBP12.41□□□□□ -0.42
ECM1-201ENST00000346569 TEX13BQ9BXU2 312 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 ASCC2Q9H1I8 757 aaPredicted RBP12.41□□□□□ -0.42
ECM1-201ENST00000346569 ZNF408Q9H9D4 720 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 BTBD7Q9P203 1132 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 PCDHA12Q9UN75 941 aa12.41□□□□□ -0.42
ECM1-201ENST00000346569 MEIS1O00470 390 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 CELF2O95319 508 aaKnown RBP12.4□□□□□ -0.42
ECM1-201ENST00000346569 UBA7P41226 1012 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 SNAPC2Q13487 334 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 NAALADL2Q58DX5 795 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 NT5DC1Q5TFE4 455 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 PDXDC2PQ6P474 469 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 IQUBQ8NA54 791 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 FAM20AQ96MK3 541 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 TAAR1Q96RJ0 339 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 TTC12Q9H892 705 aaPredicted RBP12.4□□□□□ -0.42
ECM1-201ENST00000346569 EHMT1Q9H9B1 1298 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 RNF146Q9NTX7 359 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 RABGAP1Q9Y3P9 1069 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 PCDHA5Q9Y5H7 936 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 FRMPD4Q14CM0 1322 aa12.4□□□□□ -0.42
ECM1-201ENST00000346569 CNMDO75829 334 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms