RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 PALM3A6NDB9 673 aaPredicted RBP15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 RESP18Q5W5W9 173 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 DYMQ7RTS9 669 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 KIF18AQ8NI77 898 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 NELFBQ8WX92 580 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 OTUD5Q96G74 571 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 DHTKD1Q96HY7 919 aaPredicted RBP15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 NFE2L3Q9Y4A8 694 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 EPHX2P34913 555 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 NFIAQ12857 509 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 UBE2SQ16763 222 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 DEPTORQ8TB45 409 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 RMDN3Q96TC7 470 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 MMRN2Q9H8L6 949 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 PANK4Q9NVE7 773 aa15.2■□□□□ 0.02
CSNK1G3-201ENST00000345990 CNTNAP5Q8WYK1 1306 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 LUZP1Q86V48 1076 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 STAG2Q8N3U4 1231 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 FAM167AQ96KS9 214 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 TMX2Q9Y320 296 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 CRYBG1Q9Y4K1 1723 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 ZEB2O60315 1214 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 GCNT3O95395 438 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 XRCC6P12956 609 aaKnown RBP eCLIP15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 TBC1D8BQ0IIM8 1120 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 DRC1Q96MC2 740 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 AP5M1Q9H0R1 490 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 KIAA1024Q9UPX6 916 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 CETPP11597 493 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 PNOCQ13519 176 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 MTMR2Q13614 643 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 TFDP1Q14186 410 aa15.19■□□□□ 0.02
CSNK1G3-201ENST00000345990 VEGFAP15692 232 aaPredicted RBP15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 ERO1BQ86YB8 467 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 ZMYND12Q9H0C1 365 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 RAVER2Q9HCJ3 691 aaKnown RBP15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 PRR12Q9ULL5 1215 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 RASSF7Q02833 373 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 FAM178BQ8IXR5 827 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 CHST13Q8NET6 341 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 ZSWIM4Q9H7M6 989 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 HPS5Q9UPZ3 1129 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 ASB14A6NK59 587 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 N4BP1O75113 896 aaKnown RBP15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 HMGCS2P54868 508 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 FANCCQ00597 558 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 NEDD9Q14511 834 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 PDIA5Q14554 519 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 MSANTD4Q8NCY6 345 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 GPT2Q8TD30 523 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 TBC1D12O60347 775 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 WDR44Q5JSH3 913 aa15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 FHDC1Q9C0D6 1143 aaPredicted RBP15.18■□□□□ 0.02
CSNK1G3-201ENST00000345990 IKBKBO14920 756 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 ERLIN2O94905 339 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 ATP2C1P98194 919 aaPredicted RBP15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 KARSQ15046 597 aaKnown RBP15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 SPATA1Q5VX52 437 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 PARK7Q99497 189 aaKnown RBP15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 TRPC6Q9Y210 931 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 ANKRD62A6NC57 917 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 RHBDL3P58872 404 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 DMP1Q13316 513 aaPredicted RBP15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 CEP135Q66GS9 1140 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 SLC7A3Q8WY07 619 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 WNT10BO00744 389 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 DTNBO60941 627 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 USP8P40818 1118 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 RETREG2Q8NC44 543 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 DISC1Q9NRI5 854 aa15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 ZNF215Q9UL58 517 aaPredicted RBP15.17■□□□□ 0.02
CSNK1G3-201ENST00000345990 MAFGO15525 162 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 FCER1AP12319 257 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 PCDHA5Q9Y5H7 936 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 PFASO15067 1338 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 WDR64B1ANS9 1081 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 ZBTB22O15209 634 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 EXOC3O60645 756 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 CCDC186Q7Z3E2 898 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 EIF2AK2P19525 551 aaKnown RBP15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 HOXD10P28358 340 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 POLGP54098 1239 aaPredicted RBP15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 MTMR1Q13613 665 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 RBSNQ9H1K0 784 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 BLZF1Q9H2G9 400 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 AKR1B15C9JRZ8 316 aaPredicted RBP15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 PRELPP51888 382 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 ZC3H15Q8WU90 426 aaKnown RBP15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 CCDC51Q96ER9 411 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 ELP3Q9H9T3 547 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 MAD2L2Q9UI95 211 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 DUOX1Q9NRD9 1551 aa15.16■□□□□ 0.02
CSNK1G3-201ENST00000345990 STXBP3O00186 592 aa15.15■□□□□ 0.02
CSNK1G3-201ENST00000345990 STAM2O75886 525 aa15.15■□□□□ 0.02
CSNK1G3-201ENST00000345990 HOXA13P31271 388 aaPredicted RBP15.15■□□□□ 0.02
CSNK1G3-201ENST00000345990 CDR1P51861 262 aa15.15■□□□□ 0.02
CSNK1G3-201ENST00000345990 LMBR1Q8WVP7 490 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms