RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 ALS2CLQ60I27 953 aa19.74■□□□□ 0.75
VHL-202ENST00000345392 STAG2Q8N3U4 1231 aa19.74■□□□□ 0.75
VHL-202ENST00000345392 CCDC43Q96MW1 224 aaKnown RBP19.74■□□□□ 0.75
VHL-202ENST00000345392 TFCP2L1Q9NZI6 479 aa19.74■□□□□ 0.75
VHL-202ENST00000345392 NFU1Q9UMS0 254 aa19.74■□□□□ 0.75
VHL-202ENST00000345392 PCDHA4Q9UN74 947 aa19.74■□□□□ 0.75
VHL-202ENST00000345392 TCP1P17987 556 aaKnown RBP19.73■□□□□ 0.75
VHL-202ENST00000345392 CALML3P27482 149 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 PAFAH1B1P43034 410 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 NAP1L1P55209 391 aaKnown RBP19.73■□□□□ 0.75
VHL-202ENST00000345392 SKOR1P84550 965 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 APBA1Q02410 837 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 ITIH3Q06033 890 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 ALS2CR12Q96Q35 445 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 A0A1W2PQJ5 194 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 BICDL2A1A5D9 508 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 PRLRP16471 622 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 RASSF7Q02833 373 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 SWT1Q5T5J6 900 aaKnown RBP19.73■□□□□ 0.75
VHL-202ENST00000345392 RRAGAQ7L523 313 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 ZSCAN29Q8IWY8 852 aaPredicted RBP19.73■□□□□ 0.75
VHL-202ENST00000345392 RNPC3Q96LT9 517 aaKnown RBP19.73■□□□□ 0.75
VHL-202ENST00000345392 CEP89Q96ST8 783 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 MYCBPQ99417 103 aaPredicted RBP19.73■□□□□ 0.75
VHL-202ENST00000345392 BRIP1Q9BX63 1249 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 TLR10Q9BXR5 811 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 TRIM9Q9C026 710 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 SLC39A2Q9NP94 309 aa19.73■□□□□ 0.75
VHL-202ENST00000345392 FGRP09769 529 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 MAGEA1P43355 309 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 GFPT1Q06210 699 aaPredicted RBP19.72■□□□□ 0.75
VHL-202ENST00000345392 TMC4Q7Z404 712 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 POTEDQ86YR6 584 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 FAM114A1Q8IWE2 563 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 CELF1Q92879 486 aaKnown RBP19.72■□□□□ 0.75
VHL-202ENST00000345392 MTMR8Q96EF0 704 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 USP21Q9UK80 565 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 SPATA31A6Q5VVP1 1343 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 TSPY2A6NKD2 308 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 LRRC53A6NM62 1247 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 GUCY2FP51841 1108 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 TXNRD1Q16881 649 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 CCSER1Q9C0I3 900 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 PCDHA6Q9UN73 950 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 PCDHA8Q9Y5H6 950 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 PLCH1Q4KWH8 1693 aa19.72■□□□□ 0.75
VHL-202ENST00000345392 COL14A1Q05707 1796 aaKnown RBP19.71■□□□□ 0.75
VHL-202ENST00000345392 ZNF233A6NK53 670 aa19.71■□□□□ 0.75
VHL-202ENST00000345392 H0YHG0 523 aa19.71■□□□□ 0.75
VHL-202ENST00000345392 FIGNQ5HY92 759 aa19.71■□□□□ 0.75
VHL-202ENST00000345392 OTUD6BQ8N6M0 293 aa19.71■□□□□ 0.75
VHL-202ENST00000345392 CAVIN3Q969G5 261 aa19.71■□□□□ 0.75
VHL-202ENST00000345392 SEMA6BQ9H3T3 888 aa19.71■□□□□ 0.75
VHL-202ENST00000345392 EPB41L5Q9HCM4 733 aa19.71■□□□□ 0.75
VHL-202ENST00000345392 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.71■□□□□ 0.75
VHL-202ENST00000345392 MYH14Q7Z406 1995 aaKnown RBP19.71■□□□□ 0.75
VHL-202ENST00000345392 DOT1LQ8TEK3 1739 aa19.71■□□□□ 0.75
VHL-202ENST00000345392 RNASE9P60153 205 aaKnown RBP19.71■□□□□ 0.75
VHL-202ENST00000345392 GUCY2DQ02846 1103 aa19.71■□□□□ 0.75
VHL-202ENST00000345392 CABP7Q86V35 215 aa19.71■□□□□ 0.75
VHL-202ENST00000345392 FAM84BQ96KN1 310 aaPredicted RBP19.71■□□□□ 0.75
VHL-202ENST00000345392 KCNQ2O43526 872 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 MYL1P05976 194 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 PRDX5P30044 214 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 TRADDQ15628 312 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 CFAP58Q5T655 872 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 KLHDC7AQ5VTJ3 777 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 KIAA0895Q8NCT3 520 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 NDST4Q9H3R1 872 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 SIK3Q9Y2K2 1263 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 AFF2P51816 1311 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 KIAA0754O94854 1291 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 HNRNPH3P31942 346 aaKnown RBP19.7■□□□□ 0.74
VHL-202ENST00000345392 LSP1P33241 339 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 SEC24CP53992 1094 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 PARP10Q53GL7 1025 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 RCSD1Q6JBY9 416 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 CCDC155Q8N6L0 562 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 ZNF804BA4D1E1 1349 aa19.7■□□□□ 0.74
VHL-202ENST00000345392 VWA3BQ502W6 1294 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 B4GALNT4Q76KP1 1039 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 HEATR3Q7Z4Q2 680 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 RUBCNQ92622 972 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 M0R2N6 131 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 HEXIM1O94992 359 aaKnown RBP19.69■□□□□ 0.74
VHL-202ENST00000345392 FLT1P17948 1338 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 SLC1A4P43007 532 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 MECOMQ03112 1051 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 CACNA1SQ13698 1873 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 FAM98CQ17RN3 349 aaKnown RBP19.69■□□□□ 0.74
VHL-202ENST00000345392 CCDC91Q7Z6B0 441 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 IQCKQ8N0W5 287 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 CNPY4Q8N129 248 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 FBXO41Q8TF61 875 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 CCDC47Q96A33 483 aaKnown RBP19.69■□□□□ 0.74
VHL-202ENST00000345392 MINPP1Q9UNW1 487 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 MEFVO15553 781 aaPredicted RBP19.69■□□□□ 0.74
VHL-202ENST00000345392 KIF5BP33176 963 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 CAVIN4Q5BKX8 364 aa19.69■□□□□ 0.74
VHL-202ENST00000345392 PRPF38AQ8NAV1 312 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms