RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 BCORL1Q5H9F3 1711 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 ZWINTO95229 277 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 SNX16P57768 344 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 DR1Q01658 176 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 NCOA3Q9Y6Q9 1424 aa19.69■□□□□ 0.74
SMC4-201ENST00000344722 CRCPO75575 148 aa19.68■□□□□ 0.74
SMC4-201ENST00000344722 GSPT2Q8IYD1 628 aaKnown RBP19.68■□□□□ 0.74
SMC4-201ENST00000344722 POC1B-GALNT4F8VUJ3 575 aa19.68■□□□□ 0.74
SMC4-201ENST00000344722 DCTN3O75935 186 aa19.68■□□□□ 0.74
SMC4-201ENST00000344722 IQCB1Q15051 598 aa19.68■□□□□ 0.74
SMC4-201ENST00000344722 TMTC3Q6ZXV5 915 aa19.68■□□□□ 0.74
SMC4-201ENST00000344722 EEF2KMTQ96G04 330 aa19.68■□□□□ 0.74
SMC4-201ENST00000344722 BATF3Q9NR55 127 aa19.68■□□□□ 0.74
SMC4-201ENST00000344722 ABTB1Q969K4 478 aaPredicted RBP19.68■□□□□ 0.74
SMC4-201ENST00000344722 DDIT3P35638 169 aa19.68■□□□□ 0.74
SMC4-201ENST00000344722 SLCO1A2P46721 670 aa19.68■□□□□ 0.74
SMC4-201ENST00000344722 NUGGCQ68CJ6 796 aa19.68■□□□□ 0.74
SMC4-201ENST00000344722 ZNF579Q8NAF0 562 aaKnown RBP19.68■□□□□ 0.74
SMC4-201ENST00000344722 VTI1AQ96AJ9 217 aa19.68■□□□□ 0.74
SMC4-201ENST00000344722 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.67■□□□□ 0.74
SMC4-201ENST00000344722 GABPB2Q8TAK5 448 aaPredicted RBP19.67■□□□□ 0.74
SMC4-201ENST00000344722 CORO7P57737 925 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 BEND6Q5SZJ8 279 aaPredicted RBP19.67■□□□□ 0.74
SMC4-201ENST00000344722 DISP1Q96F81 1524 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 CIAO1O76071 339 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 ELF1P32519 619 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 BIRC2Q13490 618 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 CAPN12Q6ZSI9 719 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 NLRP7Q8WX94 980 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 ANKRD20A4Q4UJ75 823 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 ANKRD20A8PQ5CZ79 823 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 ANKRD20A2Q5SQ80 823 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 ANKRD20A1Q5TYW2 823 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 LARP4BQ92615 738 aaKnown RBP19.67■□□□□ 0.74
SMC4-201ENST00000344722 YY1AP1Q9H869 796 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 ATP7AQ04656 1500 aa19.67■□□□□ 0.74
SMC4-201ENST00000344722 CYP2J2P51589 502 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 MYO1EQ12965 1108 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 TMED2Q15363 201 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 NYAP1Q6ZVC0 841 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 PCDHA12Q9UN75 941 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 PCDHB6Q9Y5E3 794 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 FKBP3Q00688 224 aaKnown RBP19.66■□□□□ 0.74
SMC4-201ENST00000344722 IWS1Q96ST2 819 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
SMC4-201ENST00000344722 DIS3Q9Y2L1 958 aaKnown RBP19.66■□□□□ 0.74
SMC4-201ENST00000344722 COL4A3BPQ9Y5P4 624 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 EIF3HO15372 352 aaKnown RBP eCLIP19.66■□□□□ 0.748e-6■□□□□ 10.6
SMC4-201ENST00000344722 CASC4Q6P4E1 433 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 HAUS1Q96CS2 278 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 LGALS16A8MUM7 142 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 GDAP1Q8TB36 358 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 AFPP02771 609 aaKnown RBP19.66■□□□□ 0.74
SMC4-201ENST00000344722 RFC4P35249 363 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 CCDC93Q567U6 631 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 NDST4Q9H3R1 872 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 STOML1Q9UBI4 398 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 PCDHA4Q9UN74 947 aa19.66■□□□□ 0.74
SMC4-201ENST00000344722 GRID2IPA4D2P6 1211 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 KCNQ3O43525 872 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 DNAJC8O75937 253 aaPredicted RBP19.65■□□□□ 0.74
SMC4-201ENST00000344722 RNF8O76064 485 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 ZNF354CQ86Y25 554 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 FAM133AQ8N9E0 248 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 ZNF496Q96IT1 587 aaPredicted RBP19.65■□□□□ 0.74
SMC4-201ENST00000344722 EPN3Q9H201 632 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 ANAPC5Q9UJX4 755 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 PRDM4Q9UKN5 801 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 RCN2Q14257 317 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 FBXW10Q5XX13 1052 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 AP1M1Q9BXS5 423 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 PTPREP23469 700 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 CEBPAP49715 358 aaPredicted RBP19.65■□□□□ 0.74
SMC4-201ENST00000344722 NR5A1Q13285 461 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 MESDQ14696 234 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 SLFN12Q8IYM2 578 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 GPKOWQ92917 476 aaPredicted RBP eCLIP19.65■□□□□ 0.742e-13■□□□□ 9.3
SMC4-201ENST00000344722 ZNF148Q9UQR1 794 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 ARHGAP4P98171 946 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 TMED1Q13445 227 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 TPTE2Q6XPS3 522 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 JAG2Q9Y219 1238 aa19.65■□□□□ 0.74
SMC4-201ENST00000344722 LRRC24Q50LG9 513 aa19.64■□□□□ 0.74
SMC4-201ENST00000344722 NME8Q8N427 588 aa19.64■□□□□ 0.74
SMC4-201ENST00000344722 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.64■□□□□ 0.74
SMC4-201ENST00000344722 GEMIN8Q9NWZ8 242 aaKnown RBP19.64■□□□□ 0.74
SMC4-201ENST00000344722 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.64■□□□□ 0.74
SMC4-201ENST00000344722 BFSP1Q12934 665 aa19.64■□□□□ 0.73
SMC4-201ENST00000344722 RDH13Q8NBN7 331 aa19.64■□□□□ 0.73
SMC4-201ENST00000344722 PLEKHG3A1L390 1219 aa19.64■□□□□ 0.73
SMC4-201ENST00000344722 USP17L12C9JPN9 530 aa19.64■□□□□ 0.73
SMC4-201ENST00000344722 USP17L21D6R901 530 aa19.64■□□□□ 0.73
SMC4-201ENST00000344722 MAGOHP61326 146 aaKnown RBP19.64■□□□□ 0.73
SMC4-201ENST00000344722 OSBPL9Q96SU4 736 aa19.64■□□□□ 0.73
SMC4-201ENST00000344722 DKC1O60832 514 aaKnown RBP eCLIP19.64■□□□□ 0.73
SMC4-201ENST00000344722 ESRRGP62508 458 aa19.64■□□□□ 0.73
SMC4-201ENST00000344722 SGO2Q562F6 1265 aa19.64■□□□□ 0.73
SMC4-201ENST00000344722 ZNF449Q6P9G9 518 aa19.64■□□□□ 0.73
SMC4-201ENST00000344722 PNMA1Q8ND90 353 aa19.64■□□□□ 0.73
SMC4-201ENST00000344722 ARHGAP18Q8N392 663 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms