RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 NKRFO15226 690 aaKnown RBP eCLIP18.61■□□□□ 0.579e-11■■□□□ 11.5
ATG4B-201ENST00000344376 CTAGE5O15320 804 aa18.61■□□□□ 0.57
ATG4B-201ENST00000344376 CYTH3O43739 400 aa18.61■□□□□ 0.57
ATG4B-201ENST00000344376 CLTBP09497 229 aa18.61■□□□□ 0.57
ATG4B-201ENST00000344376 SMARCA1P28370 1054 aa18.61■□□□□ 0.57
ATG4B-201ENST00000344376 FXR1P51114 621 aaKnown RBP eCLIP18.61■□□□□ 0.57
ATG4B-201ENST00000344376 HSD17B4P51659 736 aa18.61■□□□□ 0.57
ATG4B-201ENST00000344376 SLC35G1Q2M3R5 365 aa18.61■□□□□ 0.57
ATG4B-201ENST00000344376 TSGA10IPQ3SY00 556 aa18.61■□□□□ 0.57
ATG4B-201ENST00000344376 TOX2Q96NM4 488 aa18.61■□□□□ 0.57
ATG4B-201ENST00000344376 LRRC2Q9BYS8 371 aa18.61■□□□□ 0.57
ATG4B-201ENST00000344376 COL20A1Q9P218 1284 aa18.61■□□□□ 0.57
ATG4B-201ENST00000344376 HMGB1P09429 215 aaKnown RBP18.6■□□□□ 0.57
ATG4B-201ENST00000344376 GHRHRQ02643 423 aa18.6■□□□□ 0.57
ATG4B-201ENST00000344376 TTLL4Q14679 1199 aa18.6■□□□□ 0.57
ATG4B-201ENST00000344376 STXBP2Q15833 593 aa18.6■□□□□ 0.57
ATG4B-201ENST00000344376 BRDTQ58F21 947 aaPredicted RBP18.6■□□□□ 0.57
ATG4B-201ENST00000344376 DHX32Q7L7V1 743 aaKnown RBP18.6■□□□□ 0.57
ATG4B-201ENST00000344376 ANKRD33Q7Z3H0 272 aa18.6■□□□□ 0.57
ATG4B-201ENST00000344376 SGMS1Q86VZ5 419 aa18.6■□□□□ 0.57
ATG4B-201ENST00000344376 OR6J1Q8NGC5 347 aa18.6■□□□□ 0.57
ATG4B-201ENST00000344376 PIBF1Q8WXW3 757 aa18.6■□□□□ 0.57
ATG4B-201ENST00000344376 GCOM1H8Y6P7 765 aaPredicted RBP18.59■□□□□ 0.57
ATG4B-201ENST00000344376 OPLAHO14841 1288 aa18.59■□□□□ 0.57
ATG4B-201ENST00000344376 POLR2MP0CAP2 368 aa18.59■□□□□ 0.57
ATG4B-201ENST00000344376 EIF2AK2P19525 551 aaKnown RBP18.59■□□□□ 0.57
ATG4B-201ENST00000344376 CPT1AP50416 773 aa18.59■□□□□ 0.57
ATG4B-201ENST00000344376 RASEFQ8IZ41 740 aa18.59■□□□□ 0.57
ATG4B-201ENST00000344376 PXMP2Q9NR77 195 aa18.59■□□□□ 0.57
ATG4B-201ENST00000344376 TRIOBPQ9H2D6 2365 aa18.59■□□□□ 0.57
ATG4B-201ENST00000344376 MYH6P13533 1939 aa18.59■□□□□ 0.57
ATG4B-201ENST00000344376 TXNP10599 105 aaKnown RBP18.59■□□□□ 0.57
ATG4B-201ENST00000344376 COL9A3Q14050 684 aaPredicted RBP18.59■□□□□ 0.57
ATG4B-201ENST00000344376 CXCL17Q6UXB2 119 aa18.59■□□□□ 0.57
ATG4B-201ENST00000344376 MICU3Q86XE3 530 aa18.59■□□□□ 0.57
ATG4B-201ENST00000344376 TDHQ8IZJ6 230 aa18.59■□□□□ 0.57
ATG4B-201ENST00000344376 SEZ6LQ9BYH1 1024 aa18.59■□□□□ 0.57
ATG4B-201ENST00000344376 DNAH12Q6ZR08 3092 aa18.58■□□□□ 0.57
ATG4B-201ENST00000344376 ARVCFO00192 962 aa18.58■□□□□ 0.56
ATG4B-201ENST00000344376 TLR3O15455 904 aaKnown RBP18.58■□□□□ 0.56
ATG4B-201ENST00000344376 RXRAP19793 462 aa18.58■□□□□ 0.56
ATG4B-201ENST00000344376 PTGS1P23219 599 aa18.58■□□□□ 0.56
ATG4B-201ENST00000344376 HOXA13P31271 388 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-201ENST00000344376 FGD1P98174 961 aa18.58■□□□□ 0.56
ATG4B-201ENST00000344376 TMEM63BQ5T3F8 832 aa18.58■□□□□ 0.56
ATG4B-201ENST00000344376 TMEM39AQ9NV64 488 aa18.58■□□□□ 0.56
ATG4B-201ENST00000344376 POLR3EQ9NVU0 708 aa18.58■□□□□ 0.56
ATG4B-201ENST00000344376 EIF3JO75822 258 aaKnown RBP18.57■□□□□ 0.56
ATG4B-201ENST00000344376 PLEKHA8P1O95397 391 aa18.57■□□□□ 0.56
ATG4B-201ENST00000344376 NR3C2P08235 984 aa18.57■□□□□ 0.56
ATG4B-201ENST00000344376 EXOSC10Q01780 885 aaKnown RBP18.57■□□□□ 0.56
ATG4B-201ENST00000344376 ADCK5Q3MIX3 580 aa18.57■□□□□ 0.56
ATG4B-201ENST00000344376 SEPT14Q6ZU15 432 aa18.57■□□□□ 0.56
ATG4B-201ENST00000344376 SH3RF1Q7Z6J0 888 aa18.57■□□□□ 0.56
ATG4B-201ENST00000344376 RAB11FIP4Q86YS3 637 aa18.57■□□□□ 0.56
ATG4B-201ENST00000344376 FANCBQ8NB91 859 aa18.57■□□□□ 0.56
ATG4B-201ENST00000344376 TRIM43BA6NCK2 446 aa18.56■□□□□ 0.56
ATG4B-201ENST00000344376 KIAA0355O15063 1070 aa18.56■□□□□ 0.56
ATG4B-201ENST00000344376 RAG1P15918 1043 aa18.56■□□□□ 0.56
ATG4B-201ENST00000344376 HSPA4P34932 840 aa18.56■□□□□ 0.56
ATG4B-201ENST00000344376 CDK7P50613 346 aa18.56■□□□□ 0.56
ATG4B-201ENST00000344376 APOA5Q6Q788 366 aa18.56■□□□□ 0.56
ATG4B-201ENST00000344376 TMTC3Q6ZXV5 915 aa18.56■□□□□ 0.56
ATG4B-201ENST00000344376 SRBD1Q8N5C6 995 aaKnown RBP18.56■□□□□ 0.56
ATG4B-201ENST00000344376 CUL5Q93034 780 aa18.56■□□□□ 0.56
ATG4B-201ENST00000344376 TRIM43Q96BQ3 446 aaPredicted RBP18.56■□□□□ 0.56
ATG4B-201ENST00000344376 TCEANC2Q96MN5 208 aa18.56■□□□□ 0.56
ATG4B-201ENST00000344376 PDCD2LQ9BRP1 358 aa18.56■□□□□ 0.56
ATG4B-201ENST00000344376 RBM28Q9NW13 759 aaKnown RBP18.56■□□□□ 0.56
ATG4B-201ENST00000344376 PCDH10Q9P2E7 1040 aa18.56■□□□□ 0.56
ATG4B-201ENST00000344376 ZBTB43O43298 467 aa18.55■□□□□ 0.56
ATG4B-201ENST00000344376 MYCLP12524 364 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-201ENST00000344376 FAAP100Q0VG06 881 aa18.55■□□□□ 0.56
ATG4B-201ENST00000344376 FCHSD1Q86WN1 690 aa18.55■□□□□ 0.56
ATG4B-201ENST00000344376 BADQ92934 168 aa18.55■□□□□ 0.56
ATG4B-201ENST00000344376 KCNB2Q92953 911 aa18.55■□□□□ 0.56
ATG4B-201ENST00000344376 JAKMIP1Q96N16 626 aaKnown RBP18.55■□□□□ 0.56
ATG4B-201ENST00000344376 RANBP2P49792 3224 aaKnown RBP18.55■□□□□ 0.56
ATG4B-201ENST00000344376 EPB41L2O43491 1005 aaKnown RBP18.55■□□□□ 0.56
ATG4B-201ENST00000344376 KPNA6O60684 536 aa18.55■□□□□ 0.56
ATG4B-201ENST00000344376 GH1P01241 217 aa18.55■□□□□ 0.56
ATG4B-201ENST00000344376 MYL3P08590 195 aa18.55■□□□□ 0.56
ATG4B-201ENST00000344376 CCND2P30279 289 aa18.55■□□□□ 0.56
ATG4B-201ENST00000344376 ITGA7Q13683 1181 aa18.55■□□□□ 0.56
ATG4B-201ENST00000344376 CMTR1Q8N1G2 835 aaKnown RBP18.55■□□□□ 0.56
ATG4B-201ENST00000344376 MRVI1Q9Y6F6 885 aa18.55■□□□□ 0.56
ATG4B-201ENST00000344376 ARIH2O95376 493 aa18.54■□□□□ 0.56
ATG4B-201ENST00000344376 PSMA5P28066 241 aa18.54■□□□□ 0.56
ATG4B-201ENST00000344376 PGM5Q15124 567 aa18.54■□□□□ 0.56
ATG4B-201ENST00000344376 RTN1Q16799 776 aa18.54■□□□□ 0.56
ATG4B-201ENST00000344376 CCDC62Q6P9F0 684 aa18.54■□□□□ 0.56
ATG4B-201ENST00000344376 BLOC1S2Q6QNY1 142 aa18.54■□□□□ 0.56
ATG4B-201ENST00000344376 FAM126BQ8IXS8 530 aa18.54■□□□□ 0.56
ATG4B-201ENST00000344376 CCDC82Q8N4S0 544 aa18.54■□□□□ 0.56
ATG4B-201ENST00000344376 SMARCC2Q8TAQ2 1214 aa18.54■□□□□ 0.56
ATG4B-201ENST00000344376 COPS5Q92905 334 aa18.54■□□□□ 0.56
ATG4B-201ENST00000344376 MTG1Q9BT17 334 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-201ENST00000344376 NAP1L2Q9ULW6 460 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-201ENST00000344376 SNX14Q9Y5W7 946 aa18.54■□□□□ 0.56
ATG4B-201ENST00000344376 KLF18A0A0U1RQI7 1052 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms