RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 COL11A2P13942 1736 aaPredicted RBP14.66□□□□□ -0.06
COL18A1-201ENST00000342220 LMNB1P20700 586 aa14.66□□□□□ -0.06
COL18A1-201ENST00000342220 CAP2P40123 477 aa14.66□□□□□ -0.06
COL18A1-201ENST00000342220 STAT3P40763 770 aa14.66□□□□□ -0.06
COL18A1-201ENST00000342220 MMP14P50281 582 aa14.66□□□□□ -0.06
COL18A1-201ENST00000342220 RESP18Q5W5W9 173 aa14.66□□□□□ -0.06
COL18A1-201ENST00000342220 KRT25Q7Z3Z0 450 aa14.66□□□□□ -0.06
COL18A1-201ENST00000342220 SULF1Q8IWU6 871 aa14.66□□□□□ -0.06
COL18A1-201ENST00000342220 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
COL18A1-201ENST00000342220 AMNQ9BXJ7 453 aa14.66□□□□□ -0.06
COL18A1-201ENST00000342220 EFCC1Q9HA90 598 aa14.66□□□□□ -0.06
COL18A1-201ENST00000342220 ASNSP08243 561 aa14.66□□□□□ -0.06
COL18A1-201ENST00000342220 HERC5Q9UII4 1024 aaKnown RBP14.66□□□□□ -0.06
COL18A1-201ENST00000342220 MEIS1O00470 390 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 SLC37A4O43826 429 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 SFPQP23246 707 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL18A1-201ENST00000342220 TPM4P67936 248 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 FMR1Q06787 632 aaKnown RBP eCLIP14.65□□□□□ -0.061e-6■■■□□ 15.9
COL18A1-201ENST00000342220 CYP2W1Q8TAV3 490 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 NOC3LQ8WTT2 800 aaKnown RBP14.65□□□□□ -0.06
COL18A1-201ENST00000342220 HPS3Q969F9 1004 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 KRT18P05783 430 aaKnown RBP14.65□□□□□ -0.06
COL18A1-201ENST00000342220 MYCLP12524 364 aaPredicted RBP14.65□□□□□ -0.06
COL18A1-201ENST00000342220 FANCCQ00597 558 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 ILDR2Q71H61 639 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 PPP1R13BQ96KQ4 1090 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 YY1AP1Q9H869 796 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 LRWD1Q9UFC0 647 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 CCPG1Q9ULG6 757 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 YBX3P16989 372 aaKnown RBP eCLIP14.65□□□□□ -0.063e-6■□□□□ 9.8
COL18A1-201ENST00000342220 CCDC150Q8NCX0 1101 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 PURBQ96QR8 312 aaKnown RBP14.65□□□□□ -0.06
COL18A1-201ENST00000342220 HSD3B7Q9H2F3 369 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 NYAP2Q9P242 653 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 ROBO3Q96MS0 1386 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 CCDC88AQ3V6T2 1871 aa14.65□□□□□ -0.06
COL18A1-201ENST00000342220 OR52Z1P0C646 297 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 ELF2Q15723 593 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 NCAPH2Q6IBW4 605 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 MAEAQ7L5Y9 396 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 KRT26Q7Z3Y9 468 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 SH2D3AQ9BRG2 576 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 PAGR1Q9BTK6 254 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 KCND1Q9NSA2 647 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 DDX25Q9UHL0 483 aaKnown RBP14.64□□□□□ -0.07
COL18A1-201ENST00000342220 SAMM50Q9Y512 469 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 ADAMTSL1Q8N6G6 1762 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 IL17AQ16552 155 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 IQUBQ8NA54 791 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 SNX29Q8TEQ0 813 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 CPLX3Q8WVH0 158 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 ANKS1AQ92625 1134 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 DPF2Q92785 391 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 DCPSQ96C86 337 aaKnown RBP14.64□□□□□ -0.07
COL18A1-201ENST00000342220 HOOK2Q96ED9 719 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 EHD4Q9H223 541 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 LTBP1Q14766 1721 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 ASIC1P78348 528 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 KMT5BQ4FZB7 885 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 SYT10Q6XYQ8 523 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 CABP7Q86V35 215 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 ZMYND12Q9H0C1 365 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 RIOX1Q9H6W3 641 aa14.64□□□□□ -0.07
COL18A1-201ENST00000342220 GOLGA8FQ08AF8 430 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 GOLGA8DPQ0D2H9 430 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 CUL4BQ13620 913 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 DPY19L2Q6NUT2 758 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 GPATCH11Q8N954 259 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 HPSEQ9Y251 543 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 COL4A5P29400 1685 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 MAST2Q6P0Q8 1798 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 TATDN1Q6P1N9 297 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 C10orf67Q8IYJ2 551 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 RASSF4Q9H2L5 321 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 TCEAL9Q9UHQ7 104 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 CNTNAP1P78357 1384 aa14.63□□□□□ -0.07
COL18A1-201ENST00000342220 SLU7O95391 586 aaKnown RBP14.62□□□□□ -0.07
COL18A1-201ENST00000342220 GYS2P54840 703 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 TMEM266Q2M3C6 531 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 GRIPAP1Q4V328 841 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 OTUD5Q96G74 571 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 ERO1AQ96HE7 468 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 ANO3Q9BYT9 981 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 TUBE1Q9UJT0 475 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 IKBKBO14920 756 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 HIRAP54198 1017 aaPredicted RBP14.62□□□□□ -0.07
COL18A1-201ENST00000342220 ATP2C1P98194 919 aaPredicted RBP14.62□□□□□ -0.07
COL18A1-201ENST00000342220 GADL1Q6ZQY3 521 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 LRRN4CLQ8ND94 238 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 ZNF397Q8NF99 534 aaPredicted RBP14.62□□□□□ -0.07
COL18A1-201ENST00000342220 FERMT2Q96AC1 680 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 FANCLQ9NW38 375 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 PCDHA12Q9UN75 941 aa14.62□□□□□ -0.07
COL18A1-201ENST00000342220 KIF2AO00139 706 aaPredicted RBP14.61□□□□□ -0.07
COL18A1-201ENST00000342220 PLCG1P19174 1290 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 EIF2AK2P19525 551 aaKnown RBP14.61□□□□□ -0.07
COL18A1-201ENST00000342220 UBASH3AP57075 661 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 FBXO38Q6PIJ6 1188 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 CHURC1Q8WUH1 139 aa14.61□□□□□ -0.07
COL18A1-201ENST00000342220 CALML4Q96GE6 196 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms