RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 XDHP47989 1333 aa17.01■□□□□ 0.31
LIMK2-203ENST00000340552 PPP1R3GB7ZBB8 358 aa17.01■□□□□ 0.31
LIMK2-203ENST00000340552 SCTRP47872 440 aa17.01■□□□□ 0.31
LIMK2-203ENST00000340552 TOB1P50616 345 aaPredicted RBP17.01■□□□□ 0.31
LIMK2-203ENST00000340552 KIAA1328Q86T90 577 aa17.01■□□□□ 0.31
LIMK2-203ENST00000340552 SDR42E1Q8WUS8 393 aa17.01■□□□□ 0.31
LIMK2-203ENST00000340552 RUBCNQ92622 972 aa17.01■□□□□ 0.31
LIMK2-203ENST00000340552 HOOK2Q96ED9 719 aa17.01■□□□□ 0.31
LIMK2-203ENST00000340552 RIOK1Q9BRS2 568 aaKnown RBP17.01■□□□□ 0.31
LIMK2-203ENST00000340552 ANO9A1A5B4 782 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 UBE2Q2LH0YL09 131 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 COPB1P53618 953 aaKnown RBP17■□□□□ 0.31
LIMK2-203ENST00000340552 XRCC4Q13426 336 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 TRIM14Q14142 442 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 NSUN4Q96CB9 384 aaKnown RBP17■□□□□ 0.31
LIMK2-203ENST00000340552 SLC39A2Q9NP94 309 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 STIM2Q9P246 746 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 LIMA1Q9UHB6 759 aaKnown RBP17■□□□□ 0.31
LIMK2-203ENST00000340552 ANGEL1Q9UNK9 670 aaKnown RBP17■□□□□ 0.31
LIMK2-203ENST00000340552 TTC26A0AVF1 554 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 AFMP43652 599 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 PPARDQ03181 441 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 AKNAD1Q5T1N1 836 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 HAUS3Q68CZ6 603 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 WDR59Q6PJI9 974 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 EHBP1Q8NDI1 1231 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 SPATA4Q8NEY3 305 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 NSMCE1Q8WV22 266 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 STAMBPL1Q96FJ0 436 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 THOC1Q96FV9 657 aaKnown RBP17■□□□□ 0.31
LIMK2-203ENST00000340552 RBM17Q96I25 401 aaKnown RBP17■□□□□ 0.31
LIMK2-203ENST00000340552 CTNND2Q9UQB3 1225 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 ENO4A6NNW6 628 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 SH2B2O14492 632 aaPredicted RBP17■□□□□ 0.31
LIMK2-203ENST00000340552 KRT86O43790 486 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 ATP6V1G2O95670 118 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 IFFO1Q0D2I5 559 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 QPCTQ16769 361 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 CFAP58Q5T655 872 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 PIK3R5Q8WYR1 880 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 BORCS6Q96GS4 357 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 SMARCAL1Q9NZC9 954 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 JAG2Q9Y219 1238 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 TACC3Q9Y6A5 838 aa17■□□□□ 0.31
LIMK2-203ENST00000340552 ATP2C2O75185 946 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 FAM153BP0C7A2 387 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 PRDX5P30044 214 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 DYNLL1P63167 89 aaKnown RBP16.99■□□□□ 0.31
LIMK2-203ENST00000340552 MECOMQ03112 1051 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 FAM153CQ494X1 144 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 KANK3Q6NY19 840 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 CNNM2Q9H8M5 875 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 NOD2Q9HC29 1040 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 BATF3Q9NR55 127 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 FAM153AQ9UHL3 310 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 LRRC10BA6NIK2 292 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 RXRBP28702 533 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 RWDD2BP57060 319 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 MYO1EQ12965 1108 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 ITGB3BPQ13352 177 aaPredicted RBP16.99■□□□□ 0.31
LIMK2-203ENST00000340552 BZW1Q7L1Q6 419 aaKnown RBP16.99■□□□□ 0.31
LIMK2-203ENST00000340552 OR8K1Q8NGG5 319 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 SAAL1Q96ER3 474 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 TMEM87BQ96K49 555 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 EHD2Q9NZN4 543 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 SNX12Q9UMY4 172 aa16.99■□□□□ 0.31
LIMK2-203ENST00000340552 TIAM2Q8IVF5 1701 aa16.98■□□□□ 0.31
LIMK2-203ENST00000340552 MACROD2A1Z1Q3 448 aa16.98■□□□□ 0.31
LIMK2-203ENST00000340552 SSR1P43307 286 aaKnown RBP16.98■□□□□ 0.31
LIMK2-203ENST00000340552 ZNF572Q7Z3I7 529 aaPredicted RBP16.98■□□□□ 0.31
LIMK2-203ENST00000340552 AKT1S1Q96B36 256 aa16.98■□□□□ 0.31
LIMK2-203ENST00000340552 ATP6V1G3Q96LB4 118 aa16.98■□□□□ 0.31
LIMK2-203ENST00000340552 CCDC88AQ3V6T2 1871 aa16.98■□□□□ 0.31
LIMK2-203ENST00000340552 A0A087X0B3 334 aa16.98■□□□□ 0.31
LIMK2-203ENST00000340552 SRRM3A6NNA2 597 aaPredicted RBP16.98■□□□□ 0.31
LIMK2-203ENST00000340552 SNUPNO95149 360 aaKnown RBP16.98■□□□□ 0.31
LIMK2-203ENST00000340552 ELF3P78545 371 aaPredicted RBP16.98■□□□□ 0.31
LIMK2-203ENST00000340552 GPSM2P81274 684 aa16.98■□□□□ 0.31
LIMK2-203ENST00000340552 BYSLQ13895 437 aaKnown RBP16.98■□□□□ 0.31
LIMK2-203ENST00000340552 ZNF662Q6ZS27 426 aa16.98■□□□□ 0.31
LIMK2-203ENST00000340552 COL23A1Q86Y22 540 aaPredicted RBP16.98■□□□□ 0.31
LIMK2-203ENST00000340552 SPDYE1Q8NFV5 336 aaPredicted RBP16.98■□□□□ 0.31
LIMK2-203ENST00000340552 NUP58Q9BVL2 599 aa16.98■□□□□ 0.31
LIMK2-203ENST00000340552 KRT23Q9C075 422 aa16.98■□□□□ 0.31
LIMK2-203ENST00000340552 EBF2Q9HAK2 575 aa16.98■□□□□ 0.31
LIMK2-203ENST00000340552 ZSWIM5Q9P217 1185 aa16.98■□□□□ 0.31
LIMK2-203ENST00000340552 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.98■□□□□ 0.31
LIMK2-203ENST00000340552 MPHOSPH10O00566 681 aaKnown RBP16.97■□□□□ 0.31
LIMK2-203ENST00000340552 CDC25CP30307 473 aa16.97■□□□□ 0.31
LIMK2-203ENST00000340552 ITIH3Q06033 890 aa16.97■□□□□ 0.31
LIMK2-203ENST00000340552 RRP12Q5JTH9 1297 aaKnown RBP16.97■□□□□ 0.31
LIMK2-203ENST00000340552 IGDCC4Q8TDY8 1250 aa16.97■□□□□ 0.31
LIMK2-203ENST00000340552 GPR101Q96P66 508 aaPredicted RBP16.97■□□□□ 0.31
LIMK2-203ENST00000340552 DNAJC7Q99615 494 aa16.97■□□□□ 0.31
LIMK2-203ENST00000340552 BAIAP2L1Q9UHR4 511 aa16.97■□□□□ 0.31
LIMK2-203ENST00000340552 BAZ2AQ9UIF9 1905 aaKnown RBP16.97■□□□□ 0.31
LIMK2-203ENST00000340552 MINDY4BA8MYZ0 360 aa16.97■□□□□ 0.31
LIMK2-203ENST00000340552 BUB1BO60566 1050 aaPredicted RBP16.97■□□□□ 0.31
LIMK2-203ENST00000340552 TNFRSF8P28908 595 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms