RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 RMDN3Q96TC7 470 aa14.79□□□□□ -0.04
SRSF3-201ENST00000339436 PSTPIP2Q9H939 334 aa14.79□□□□□ -0.04
SRSF3-201ENST00000339436 FRMPD4Q14CM0 1322 aa14.79□□□□□ -0.04
SRSF3-201ENST00000339436 TNRC18O15417 2968 aaPredicted RBP14.78□□□□□ -0.04
SRSF3-201ENST00000339436 SEPT4O43236 478 aa14.78□□□□□ -0.04
SRSF3-201ENST00000339436 DEXIO95424 95 aa14.78□□□□□ -0.04
SRSF3-201ENST00000339436 CTDNEP1O95476 244 aa14.78□□□□□ -0.04
SRSF3-201ENST00000339436 GJA8P48165 433 aa14.78□□□□□ -0.04
SRSF3-201ENST00000339436 SSRP1Q08945 709 aaKnown RBP14.78□□□□□ -0.04
SRSF3-201ENST00000339436 USP17L6PQ6QN14 398 aa14.78□□□□□ -0.04
SRSF3-201ENST00000339436 TEX2Q8IWB9 1127 aa14.78□□□□□ -0.04
SRSF3-201ENST00000339436 U2AF1L4Q8WU68 220 aaKnown RBP14.78□□□□□ -0.04
SRSF3-201ENST00000339436 CUL5Q93034 780 aa14.78□□□□□ -0.04
SRSF3-201ENST00000339436 SHISA4Q96DD7 197 aa14.78□□□□□ -0.04
SRSF3-201ENST00000339436 MPHOSPH6Q99547 160 aaKnown RBP14.78□□□□□ -0.04
SRSF3-201ENST00000339436 PXMP2Q9NR77 195 aa14.78□□□□□ -0.04
SRSF3-201ENST00000339436 ZHX1Q9UKY1 873 aaPredicted RBP14.78□□□□□ -0.04
SRSF3-201ENST00000339436 ESYT2A0FGR8 921 aa14.77□□□□□ -0.04
SRSF3-201ENST00000339436 MSCO60682 206 aa14.77□□□□□ -0.04
SRSF3-201ENST00000339436 CD2BP2O95400 341 aaKnown RBP14.77□□□□□ -0.04
SRSF3-201ENST00000339436 EIF2AK2P19525 551 aaKnown RBP14.77□□□□□ -0.04
SRSF3-201ENST00000339436 CNGA1P29973 690 aa14.77□□□□□ -0.04
SRSF3-201ENST00000339436 ADCY7P51828 1080 aa14.77□□□□□ -0.04
SRSF3-201ENST00000339436 ACVR2BQ13705 512 aa14.77□□□□□ -0.04
SRSF3-201ENST00000339436 ARHGEF16Q5VV41 709 aa14.77□□□□□ -0.04
SRSF3-201ENST00000339436 FCHSD1Q86WN1 690 aa14.77□□□□□ -0.04
SRSF3-201ENST00000339436 FBXO16Q8IX29 292 aaPredicted RBP14.77□□□□□ -0.04
SRSF3-201ENST00000339436 CCDC12Q8WUD4 166 aaPredicted RBP14.77□□□□□ -0.04
SRSF3-201ENST00000339436 CRISPLD2Q9H0B8 497 aa14.77□□□□□ -0.04
SRSF3-201ENST00000339436 VTA1Q9NP79 307 aa14.77□□□□□ -0.04
SRSF3-201ENST00000339436 RIC8AQ9NPQ8 531 aa14.77□□□□□ -0.04
SRSF3-201ENST00000339436 SH2B1Q9NRF2 756 aaPredicted RBP14.77□□□□□ -0.04
SRSF3-201ENST00000339436 DDX20Q9UHI6 824 aaKnown RBP14.77□□□□□ -0.04
SRSF3-201ENST00000339436 B4DLN1 442 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 AKR1A1P14550 325 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 MRPL12P52815 198 aaKnown RBP14.76□□□□□ -0.05
SRSF3-201ENST00000339436 PDE4DQ08499 809 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 UBE2SQ16763 222 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 NSUN7Q8NE18 718 aaKnown RBP14.76□□□□□ -0.05
SRSF3-201ENST00000339436 CCDC148Q8NFR7 591 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 SMARCC2Q8TAQ2 1214 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 ZSCAN31Q96LW9 406 aaPredicted RBP14.76□□□□□ -0.05
SRSF3-201ENST00000339436 IWS1Q96ST2 819 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 PDCD2LQ9BRP1 358 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 CEP290O15078 2479 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 ALPK3Q96L96 1907 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 CAPN15O75808 1086 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 SGPL1O95470 568 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 CCDC144BQ3MJ40 725 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 LHX8Q68G74 356 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 EEPD1Q7L9B9 569 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 CCDC83Q8IWF9 413 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 IL31RAQ8NI17 732 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 ZMYND12Q9H0C1 365 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 GLT8D2Q9H1C3 349 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 SH3GLB2Q9NR46 395 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 VPS54Q9P1Q0 977 aa14.76□□□□□ -0.05
SRSF3-201ENST00000339436 SMCO2A6NFE2 343 aa14.75□□□□□ -0.05
SRSF3-201ENST00000339436 ADCY6O43306 1168 aa14.75□□□□□ -0.05
SRSF3-201ENST00000339436 JAK2O60674 1132 aa14.75□□□□□ -0.05
SRSF3-201ENST00000339436 NR3C2P08235 984 aa14.75□□□□□ -0.05
SRSF3-201ENST00000339436 EN2P19622 333 aaPredicted RBP14.75□□□□□ -0.05
SRSF3-201ENST00000339436 MCM2P49736 904 aa14.75□□□□□ -0.05
SRSF3-201ENST00000339436 PGM5Q15124 567 aa14.75□□□□□ -0.05
SRSF3-201ENST00000339436 FAM177A1Q8N128 213 aaPredicted RBP14.75□□□□□ -0.05
SRSF3-201ENST00000339436 LENG1Q96BZ8 264 aaPredicted RBP14.75□□□□□ -0.05
SRSF3-201ENST00000339436 AIFM3Q96NN9 605 aa14.75□□□□□ -0.05
SRSF3-201ENST00000339436 ORC3Q9UBD5 711 aaPredicted RBP14.75□□□□□ -0.05
SRSF3-201ENST00000339436 OGDHLQ9ULD0 1010 aa14.75□□□□□ -0.05
SRSF3-201ENST00000339436 SPDYE3A6NKU9 549 aa14.74□□□□□ -0.05
SRSF3-201ENST00000339436 DTNBO60941 627 aa14.74□□□□□ -0.05
SRSF3-201ENST00000339436 RARBP10826 455 aa14.74□□□□□ -0.05
SRSF3-201ENST00000339436 CLK2P49760 499 aaKnown RBP14.74□□□□□ -0.05
SRSF3-201ENST00000339436 ANO1Q5XXA6 986 aa14.74□□□□□ -0.05
SRSF3-201ENST00000339436 TAPT1Q6NXT6 567 aa14.74□□□□□ -0.05
SRSF3-201ENST00000339436 C6orf50Q9HD87 102 aa14.74□□□□□ -0.05
SRSF3-201ENST00000339436 FAM184BQ9ULE4 1060 aa14.74□□□□□ -0.05
SRSF3-201ENST00000339436 FDPSP14324 419 aaKnown RBP14.73□□□□□ -0.05
SRSF3-201ENST00000339436 CAPN2P17655 700 aa14.73□□□□□ -0.05
SRSF3-201ENST00000339436 GNA11P29992 359 aa14.73□□□□□ -0.05
SRSF3-201ENST00000339436 ADCYAP1R1P41586 468 aa14.73□□□□□ -0.05
SRSF3-201ENST00000339436 AP3B2Q13367 1082 aa14.73□□□□□ -0.05
SRSF3-201ENST00000339436 STXBP2Q15833 593 aa14.73□□□□□ -0.05
SRSF3-201ENST00000339436 REXO1Q8N1G1 1221 aaKnown RBP14.73□□□□□ -0.05
SRSF3-201ENST00000339436 TMX3Q96JJ7 454 aa14.73□□□□□ -0.05
SRSF3-201ENST00000339436 LLPHQ9BRT6 129 aaKnown RBP14.73□□□□□ -0.05
SRSF3-201ENST00000339436 PDGFCQ9NRA1 345 aa14.73□□□□□ -0.05
SRSF3-201ENST00000339436 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.72□□□□□ -0.05
SRSF3-201ENST00000339436 RBM47A0AV96 593 aaKnown RBP14.72□□□□□ -0.05
SRSF3-201ENST00000339436 ADAMTS3O15072 1205 aa14.72□□□□□ -0.05
SRSF3-201ENST00000339436 DUSP11O75319 330 aaKnown RBP14.72□□□□□ -0.05
SRSF3-201ENST00000339436 EIF3JO75822 258 aaKnown RBP14.72□□□□□ -0.05
SRSF3-201ENST00000339436 CCND2P30279 289 aa14.72□□□□□ -0.05
SRSF3-201ENST00000339436 PCNX4Q63HM2 1172 aa14.72□□□□□ -0.05
SRSF3-201ENST00000339436 VSIG10LQ86VR7 867 aa14.72□□□□□ -0.05
SRSF3-201ENST00000339436 SCFD2Q8WU76 684 aa14.72□□□□□ -0.05
SRSF3-201ENST00000339436 WASF1Q92558 559 aa14.72□□□□□ -0.05
SRSF3-201ENST00000339436 ANO3Q9BYT9 981 aa14.72□□□□□ -0.05
SRSF3-201ENST00000339436 XPNPEP3Q9NQH7 507 aa14.72□□□□□ -0.05
SRSF3-201ENST00000339436 PCDHA6Q9UN73 950 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms