RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 NFKBIBQ15653 356 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 LETM2Q2VYF4 491 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 SYTL5Q8TDW5 730 aaPredicted RBP16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 PGBD1Q96JS3 809 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 ZFYVE28Q9HCC9 887 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 FRMPD4Q14CM0 1322 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 ZNF236Q9UL36 1845 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 CYP3A4P08684 503 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 PTPAQ15257 358 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 SLC30A10Q6XR72 485 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 ANKRD35Q8N283 1001 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 TBC1D5Q92609 795 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 GDPD2Q9HCC8 539 aa16.53■□□□□ 0.24
NIPAL3-202ENST00000339255 RPTORQ8N122 1335 aa16.52■□□□□ 0.24
NIPAL3-202ENST00000339255 PLXNA1Q9UIW2 1896 aa16.52■□□□□ 0.24
NIPAL3-202ENST00000339255 NEMFO60524 1076 aa16.52■□□□□ 0.23
NIPAL3-202ENST00000339255 CCNT1O60563 726 aaKnown RBP16.52■□□□□ 0.23
NIPAL3-202ENST00000339255 TLR2O60603 784 aa16.52■□□□□ 0.23
NIPAL3-202ENST00000339255 MCM7P33993 719 aa16.52■□□□□ 0.23
NIPAL3-202ENST00000339255 MAP2K2P36507 400 aa16.52■□□□□ 0.23
NIPAL3-202ENST00000339255 BAATQ14032 418 aaPredicted RBP16.52■□□□□ 0.23
NIPAL3-202ENST00000339255 NBR1Q14596 966 aa16.52■□□□□ 0.23
NIPAL3-202ENST00000339255 CCAR1Q8IX12 1150 aaKnown RBP16.52■□□□□ 0.23
NIPAL3-202ENST00000339255 CYP3A7-CYP3A51PA0A087WV96 503 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 GOLGA6L4A6NEF3 574 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 FCER1AP12319 257 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 CYP3A7P24462 503 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 MAPK4P31152 587 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 CIITAP33076 1130 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 ME1P48163 572 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 UBE2HP62256 183 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 ATP2C1P98194 919 aaPredicted RBP16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 KCTD2Q14681 263 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 Q3C1V9 767 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 ARL6IP4Q66PJ3 421 aaKnown RBP16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 XRRA1Q6P2D8 792 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 ABRAQ8N0Z2 381 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 DNERQ8NFT8 737 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 NSUN6Q8TEA1 469 aaKnown RBP16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 FERMT2Q96AC1 680 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 RMDN3Q96TC7 470 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 COL20A1Q9P218 1284 aa16.51■□□□□ 0.23
NIPAL3-202ENST00000339255 CA12O43570 354 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 STRNO43815 780 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 PEX10O60683 326 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 PRPF40AO75400 957 aaKnown RBP16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 BCRP11274 1271 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 PRPHP41219 470 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 PTGDRQ13258 359 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 ZNF174Q15697 407 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 PCNX4Q63HM2 1172 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 PXMP2Q9NR77 195 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 LMBRD1Q9NUN5 540 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 ADD3Q9UEY8 706 aaKnown RBP16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 DDX25Q9UHL0 483 aaKnown RBP16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 IVNS1ABPQ9Y6Y0 642 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 MGAMO43451 1857 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 WNT7AO00755 349 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 KRI1Q8N9T8 703 aaKnown RBP16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 MBOAT7Q96N66 472 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 MMP19Q99542 508 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 PORCNQ9H237 461 aa16.5■□□□□ 0.23
NIPAL3-202ENST00000339255 KIAA1217Q5T5P2 1943 aa16.49■□□□□ 0.23
NIPAL3-202ENST00000339255 LOC102724159A0A0B4J2E5 919 aa16.49■□□□□ 0.23
NIPAL3-202ENST00000339255 B4DLN1 442 aa16.49■□□□□ 0.23
NIPAL3-202ENST00000339255 SETQ01105 290 aaPredicted RBP16.49■□□□□ 0.23
NIPAL3-202ENST00000339255 CRHR2Q13324 411 aa16.49■□□□□ 0.23
NIPAL3-202ENST00000339255 PWP2Q15269 919 aaKnown RBP16.49■□□□□ 0.23
NIPAL3-202ENST00000339255 WDR78Q5VTH9 848 aa16.49■□□□□ 0.23
NIPAL3-202ENST00000339255 ARHGEF16Q5VV41 709 aa16.49■□□□□ 0.23
NIPAL3-202ENST00000339255 IWS1Q96ST2 819 aa16.49■□□□□ 0.23
NIPAL3-202ENST00000339255 ZIC5Q96T25 663 aa16.49■□□□□ 0.23
NIPAL3-202ENST00000339255 MPHOSPH6Q99547 160 aaKnown RBP16.49■□□□□ 0.23
NIPAL3-202ENST00000339255 PDCD2LQ9BRP1 358 aa16.49■□□□□ 0.23
NIPAL3-202ENST00000339255 POTEB2H3BUK9 544 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 CUTAO60888 179 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 AOC2O75106 756 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 STAM2O75886 525 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 TDP2O95551 362 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 MBD3O95983 291 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 OR52Z1P0C646 297 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 ZNF76P36508 570 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 SKOR2Q2VWA4 1001 aaPredicted RBP16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 Q4G0T1 1027 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 ADALQ6DHV7 355 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 C17orf99Q6UX52 265 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 NIPA1Q7RTP0 329 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 TAAR1Q96RJ0 339 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 CPA4Q9UI42 421 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 SRPRBQ9Y5M8 271 aaKnown RBP16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 LRRC37A2A6NM11 1700 aa16.48■□□□□ 0.23
NIPAL3-202ENST00000339255 DOCK3Q8IZD9 2030 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 DNAJC25-GNG10A0A024R161 153 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 A0A1W2PQ27 194 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 A0A1W2PQ64 194 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 A0A1W2PQD8 194 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 TBX3O15119 743 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 EDIL3O43854 480 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 PTPREP23469 700 aa16.47■□□□□ 0.23
NIPAL3-202ENST00000339255 CCND2P30279 289 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms