RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 CYP2C9P11712 490 aa18.37■□□□□ 0.53
LINC01116-202ENST00000339037 HAND2P61296 217 aa18.37■□□□□ 0.53
LINC01116-202ENST00000339037 PDE4DQ08499 809 aa18.37■□□□□ 0.53
LINC01116-202ENST00000339037 PPP2R2DQ66LE6 453 aa18.37■□□□□ 0.53
LINC01116-202ENST00000339037 TICAM2Q86XR7 235 aa18.37■□□□□ 0.53
LINC01116-202ENST00000339037 OR6J1Q8NGC5 347 aa18.37■□□□□ 0.53
LINC01116-202ENST00000339037 MTG1Q9BT17 334 aaPredicted RBP18.37■□□□□ 0.53
LINC01116-202ENST00000339037 PFKMP08237 780 aa18.36■□□□□ 0.53
LINC01116-202ENST00000339037 PCP11498 1178 aaKnown RBP18.36■□□□□ 0.53
LINC01116-202ENST00000339037 ATP2A2P16615 1042 aaKnown RBP18.36■□□□□ 0.53
LINC01116-202ENST00000339037 RABGGTBP53611 331 aa18.36■□□□□ 0.53
LINC01116-202ENST00000339037 RPS6P62753 249 aaKnown RBP18.36■□□□□ 0.53
LINC01116-202ENST00000339037 ZNF543Q08ER8 600 aa18.36■□□□□ 0.53
LINC01116-202ENST00000339037 CCDC85BQ15834 202 aaPredicted RBP18.36■□□□□ 0.53
LINC01116-202ENST00000339037 FAM47CQ5HY64 1035 aa18.36■□□□□ 0.53
LINC01116-202ENST00000339037 ZNF589Q86UQ0 364 aaPredicted RBP18.36■□□□□ 0.53
LINC01116-202ENST00000339037 WDR19Q8NEZ3 1342 aa18.36■□□□□ 0.53
LINC01116-202ENST00000339037 SCFD2Q8WU76 684 aa18.36■□□□□ 0.53
LINC01116-202ENST00000339037 VWCEQ96DN2 955 aa18.36■□□□□ 0.53
LINC01116-202ENST00000339037 TTC14Q96N46 770 aa18.36■□□□□ 0.53
LINC01116-202ENST00000339037 TSPYL2Q9H2G4 693 aaPredicted RBP18.36■□□□□ 0.53
LINC01116-202ENST00000339037 CCDC171Q6TFL3 1326 aa18.35■□□□□ 0.53
LINC01116-202ENST00000339037 TNFRSF10AO00220 468 aa18.35■□□□□ 0.53
LINC01116-202ENST00000339037 NKRFO15226 690 aaKnown RBP eCLIP18.35■□□□□ 0.53
LINC01116-202ENST00000339037 SNHG28P0DPA3 235 aa18.35■□□□□ 0.53
LINC01116-202ENST00000339037 EDNRBP24530 442 aa18.35■□□□□ 0.53
LINC01116-202ENST00000339037 NMIQ13287 307 aaPredicted RBP18.35■□□□□ 0.53
LINC01116-202ENST00000339037 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
LINC01116-202ENST00000339037 DNERQ8NFT8 737 aa18.35■□□□□ 0.53
LINC01116-202ENST00000339037 ASB2Q96Q27 587 aa18.35■□□□□ 0.53
LINC01116-202ENST00000339037 PCDHA11Q9Y5I1 949 aa18.35■□□□□ 0.53
LINC01116-202ENST00000339037 B4DLN1 442 aa18.34■□□□□ 0.53
LINC01116-202ENST00000339037 MYOGP15173 224 aa18.34■□□□□ 0.53
LINC01116-202ENST00000339037 MRPL12P52815 198 aaKnown RBP18.34■□□□□ 0.53
LINC01116-202ENST00000339037 HDAC1Q13547 482 aaPredicted RBP18.34■□□□□ 0.53
LINC01116-202ENST00000339037 TTLL4Q14679 1199 aa18.34■□□□□ 0.53
LINC01116-202ENST00000339037 NBPF20Q3BBV1 942 aa18.34■□□□□ 0.53
LINC01116-202ENST00000339037 DEFB128Q7Z7B8 93 aa18.34■□□□□ 0.53
LINC01116-202ENST00000339037 RNF41Q9H4P4 317 aaPredicted RBP18.34■□□□□ 0.53
LINC01116-202ENST00000339037 A6NJR5 290 aa18.33■□□□□ 0.52
LINC01116-202ENST00000339037 TRIM6-TRIM34B2RNG4 842 aa18.33■□□□□ 0.52
LINC01116-202ENST00000339037 KPNA6O60684 536 aa18.33■□□□□ 0.52
LINC01116-202ENST00000339037 MRPS5P82675 430 aaKnown RBP18.33■□□□□ 0.52
LINC01116-202ENST00000339037 USH1GQ495M9 461 aa18.33■□□□□ 0.52
LINC01116-202ENST00000339037 GPATCH4Q5T3I0 446 aaKnown RBP18.33■□□□□ 0.52
LINC01116-202ENST00000339037 NFRKBQ6P4R8 1299 aa18.33■□□□□ 0.52
LINC01116-202ENST00000339037 TBC1D10CQ8IV04 446 aa18.33■□□□□ 0.52
LINC01116-202ENST00000339037 PIP4P2Q8N4L2 257 aa18.33■□□□□ 0.52
LINC01116-202ENST00000339037 ESR2Q92731 530 aa18.33■□□□□ 0.52
LINC01116-202ENST00000339037 GBF1Q92538 1859 aa18.33■□□□□ 0.52
LINC01116-202ENST00000339037 SCN10AQ9Y5Y9 1956 aa18.32■□□□□ 0.52
LINC01116-202ENST00000339037 GOLGA8HP0CJ92 632 aa18.32■□□□□ 0.52
LINC01116-202ENST00000339037 TXNP10599 105 aaKnown RBP18.32■□□□□ 0.52
LINC01116-202ENST00000339037 ACTN1P12814 892 aa18.32■□□□□ 0.52
LINC01116-202ENST00000339037 RFC2P35250 354 aa18.32■□□□□ 0.52
LINC01116-202ENST00000339037 TMEM67Q5HYA8 995 aa18.32■□□□□ 0.52
LINC01116-202ENST00000339037 SPRYD3Q8NCJ5 442 aa18.32■□□□□ 0.52
LINC01116-202ENST00000339037 IL27Q8NEV9 243 aa18.32■□□□□ 0.52
LINC01116-202ENST00000339037 ADAMTS19Q8TE59 1207 aa18.32■□□□□ 0.52
LINC01116-202ENST00000339037 COPS5Q92905 334 aa18.32■□□□□ 0.52
LINC01116-202ENST00000339037 NOD1Q9Y239 953 aa18.32■□□□□ 0.52
LINC01116-202ENST00000339037 NEDD4P46934 1319 aa18.31■□□□□ 0.52
LINC01116-202ENST00000339037 LAMA4Q16363 1823 aa18.31■□□□□ 0.52
LINC01116-202ENST00000339037 MFAP1P55081 439 aaKnown RBP18.31■□□□□ 0.52
LINC01116-202ENST00000339037 MICALL1Q8N3F8 863 aa18.31■□□□□ 0.52
LINC01116-202ENST00000339037 RETREG2Q8NC44 543 aa18.31■□□□□ 0.52
LINC01116-202ENST00000339037 RGS22Q8NE09 1264 aa18.31■□□□□ 0.52
LINC01116-202ENST00000339037 PPP1R13LQ8WUF5 828 aa18.31■□□□□ 0.52
LINC01116-202ENST00000339037 RILPL2Q969X0 211 aa18.31■□□□□ 0.52
LINC01116-202ENST00000339037 LNPKQ9C0E8 428 aa18.31■□□□□ 0.52
LINC01116-202ENST00000339037 CA3P07451 260 aa18.3■□□□□ 0.52
LINC01116-202ENST00000339037 PTPN11Q06124 597 aaPredicted RBP18.3■□□□□ 0.52
LINC01116-202ENST00000339037 DGKHQ86XP1 1220 aa18.3■□□□□ 0.52
LINC01116-202ENST00000339037 SLC9A7Q96T83 725 aa18.3■□□□□ 0.52
LINC01116-202ENST00000339037 ZKSCAN3Q9BRR0 538 aa18.3■□□□□ 0.52
LINC01116-202ENST00000339037 CPVLQ9H3G5 476 aa18.3■□□□□ 0.52
LINC01116-202ENST00000339037 ZNF213O14771 459 aa18.29■□□□□ 0.52
LINC01116-202ENST00000339037 ARIH2O95376 493 aa18.29■□□□□ 0.52
LINC01116-202ENST00000339037 IQCF3P0C7M6 154 aa18.29■□□□□ 0.52
LINC01116-202ENST00000339037 NT5C2P49902 561 aa18.29■□□□□ 0.52
LINC01116-202ENST00000339037 CHMP4BP1P59074 171 aa18.29■□□□□ 0.52
LINC01116-202ENST00000339037 BFSP2Q13515 415 aa18.29■□□□□ 0.52
LINC01116-202ENST00000339037 CDC37Q16543 378 aaPredicted RBP18.29■□□□□ 0.52
LINC01116-202ENST00000339037 IQCA1Q86XH1 822 aa18.29■□□□□ 0.52
LINC01116-202ENST00000339037 PNMA1Q8ND90 353 aa18.29■□□□□ 0.52
LINC01116-202ENST00000339037 UHRF1Q96T88 793 aaPredicted RBP18.29■□□□□ 0.52
LINC01116-202ENST00000339037 FTOQ9C0B1 505 aaKnown RBP eCLIP18.29■□□□□ 0.52
LINC01116-202ENST00000339037 UBA5Q9GZZ9 404 aa18.29■□□□□ 0.52
LINC01116-202ENST00000339037 PHOSPHO2Q8TCD6 241 aa18.28■□□□□ 0.52
LINC01116-202ENST00000339037 MAF1Q9H063 256 aa18.28■□□□□ 0.52
LINC01116-202ENST00000339037 PRRC2BQ5JSZ5 2229 aaKnown RBP18.28■□□□□ 0.52
LINC01116-202ENST00000339037 ABCB11O95342 1321 aa18.27■□□□□ 0.52
LINC01116-202ENST00000339037 GTPBP6O43824 516 aaPredicted RBP18.27■□□□□ 0.52
LINC01116-202ENST00000339037 KDM4AO75164 1064 aa18.27■□□□□ 0.52
LINC01116-202ENST00000339037 SDSP20132 328 aa18.27■□□□□ 0.52
LINC01116-202ENST00000339037 PTGISQ16647 500 aa18.27■□□□□ 0.52
LINC01116-202ENST00000339037 CCDC178Q5BJE1 867 aa18.27■□□□□ 0.52
LINC01116-202ENST00000339037 CCDC62Q6P9F0 684 aa18.27■□□□□ 0.52
LINC01116-202ENST00000339037 CCDC155Q8N6L0 562 aa18.27■□□□□ 0.52
LINC01116-202ENST00000339037 NSUN6Q8TEA1 469 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms