RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 MCF2L2Q86YR7 1114 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 GOLGA6L10A0A0M3HER8 536 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 NR2F2P24468 414 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 TRIM58Q8NG06 486 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 OSBPL5Q9H0X9 879 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-202ENST00000338368 CYP2J2P51589 502 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 SEC23AQ15436 765 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 C16orf86Q6ZW13 317 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 THAP9Q9H5L6 903 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 TCP11X2Q5H9J9 407 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 SLC35F6Q8N357 371 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 WDR11Q9BZH6 1224 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 GPR75-ASB3A0A0A6YYF3 556 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 TRIM49BA6NDI0 452 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 SOWAHDA6NJG2 315 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 ODR4Q5SWX8 454 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 CIAPIN1Q6FI81 312 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 KRT26Q7Z3Y9 468 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 MB21D1Q8N884 522 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 MAP3K14Q99558 947 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 BHMT2Q9H2M3 363 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 GSTTP1A0A1W2PQM5 241 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 E9PMD0 336 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 STAT1P42224 750 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 CFAP58Q5T655 872 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 LRCH2Q5VUJ6 765 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 IWS1Q96ST2 819 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 BIRC3Q13489 604 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 OTUD6AQ7L8S5 288 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 ATF5Q9Y2D1 282 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-202ENST00000338368 PVALEFA0A1B0GWK0 134 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 WTIPA6NIX2 430 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-202ENST00000338368 TMEM110-MUSTN1A8MSY1 372 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 TDP2O95551 362 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 ZBED6P86452 979 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 KRT31Q15323 416 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 HHIPL2Q6UWX4 724 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 FAM178BQ8IXR5 827 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 ZNF577Q9BSK1 485 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 PTPAQ15257 358 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 QRICH1Q2TAL8 776 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 POTEDQ86YR6 584 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 ADGRF4Q8IZF3 695 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 GJA10Q969M2 543 aa6.95□□□□□ -1.3
PRKDC-202ENST00000338368 STAT2P52630 851 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 RETREG2Q8NC44 543 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 CNTNAP5Q8WYK1 1306 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 UNC13DQ70J99 1090 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 MEIS1O00470 390 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 CHRNA5P30532 468 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 ORC2Q13416 577 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-202ENST00000338368 XKR9Q5GH70 373 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 PPP1R18Q6NYC8 613 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 KCNF1Q9H3M0 494 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 PLA2G4BP0C869 781 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 BCRP11274 1271 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 PSMD2Q13200 908 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 DYDC1Q8WWB3 177 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 IFT74Q96LB3 600 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 NACC1Q96RE7 527 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 LSM14BQ9BX40 385 aaKnown RBP6.94□□□□□ -1.3
PRKDC-202ENST00000338368 CDC23Q9UJX2 597 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 CSADQ9Y600 493 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 POTEMA6NI47 508 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 TEX33O43247 280 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 HARSP12081 509 aaKnown RBP6.94□□□□□ -1.3
PRKDC-202ENST00000338368 ARHGEF16Q5VV41 709 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 MXD3Q9BW11 206 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.94□□□□□ -1.35e-7■■■■■ 66.1
PRKDC-202ENST00000338368 VPS18Q9P253 973 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 C8orf74Q6P047 294 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 CEP104O60308 925 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 HOXA13P31271 388 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-202ENST00000338368 EXOC3L4Q17RC7 722 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 RPGRIP1Q96KN7 1286 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 SHPRHQ149N8 1683 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 PRCPP42785 496 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 WHAMMP3Q1A5X7 153 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 FAM160B2Q86V87 743 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 CLEC10AQ8IUN9 316 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 ZFP91Q96JP5 570 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-202ENST00000338368 RGL2O15211 777 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 BUB1O43683 1085 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 ASNSP08243 561 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 USP14P54578 494 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 EN1Q05925 392 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-202ENST00000338368 SEPT7Q16181 437 aaKnown RBP6.94□□□□□ -1.3
PRKDC-202ENST00000338368 STRIP1Q5VSL9 837 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 U2AF1L4Q8WU68 220 aaKnown RBP6.94□□□□□ -1.3
PRKDC-202ENST00000338368 PIM2Q9P1W9 311 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 HPSEQ9Y251 543 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 FAM20AQ96MK3 541 aa6.94□□□□□ -1.3
PRKDC-202ENST00000338368 TNS2Q63HR2 1409 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 OPA1O60313 960 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 MFAP3LO75121 409 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 NDUFA10O95299 355 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 RNASE9P60153 205 aaKnown RBP6.93□□□□□ -1.3
PRKDC-202ENST00000338368 HDXQ7Z353 690 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 ANKRD35Q8N283 1001 aa6.93□□□□□ -1.3
PRKDC-202ENST00000338368 PRM3Q9NNZ6 103 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 770.8 ms