RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 PNMA2Q9UL42 364 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 EPOPA6NHQ4 379 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 A6NJR5 290 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 IQCF3P0C7M6 154 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 EDNRBP24530 442 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 PLA2G5P39877 138 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 BFSP2Q13515 415 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 TMEM47Q9BQJ4 181 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 C1QTNF1Q9BXJ1 281 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 FTOQ9C0B1 505 aaKnown RBP eCLIP13.54□□□□□ -0.24
CSMD2-202ENST00000338325 KIF28PB7ZC32 967 aa13.53□□□□□ -0.24
CSMD2-202ENST00000338325 PDHBP11177 359 aa13.53□□□□□ -0.24
CSMD2-202ENST00000338325 RPS6P62753 249 aaKnown RBP13.53□□□□□ -0.24
CSMD2-202ENST00000338325 TAP1Q03518 808 aa13.53□□□□□ -0.24
CSMD2-202ENST00000338325 ALX1Q15699 326 aa13.53□□□□□ -0.24
CSMD2-202ENST00000338325 RRP12Q5JTH9 1297 aaKnown RBP13.53□□□□□ -0.24
CSMD2-202ENST00000338325 HERC6Q8IVU3 1022 aa13.53□□□□□ -0.24
CSMD2-202ENST00000338325 DNERQ8NFT8 737 aa13.53□□□□□ -0.24
CSMD2-202ENST00000338325 PPP1R13LQ8WUF5 828 aa13.53□□□□□ -0.24
CSMD2-202ENST00000338325 ARNTL2Q8WYA1 636 aa13.53□□□□□ -0.24
CSMD2-202ENST00000338325 COPS5Q92905 334 aa13.53□□□□□ -0.24
CSMD2-202ENST00000338325 TCP11L1Q9NUJ3 509 aa13.53□□□□□ -0.24
CSMD2-202ENST00000338325 COG5Q9UP83 839 aa13.53□□□□□ -0.24
CSMD2-202ENST00000338325 NOD1Q9Y239 953 aa13.53□□□□□ -0.24
CSMD2-202ENST00000338325 WDR19Q8NEZ3 1342 aa13.52□□□□□ -0.24
CSMD2-202ENST00000338325 SALL3Q9BXA9 1300 aa13.52□□□□□ -0.24
CSMD2-202ENST00000338325 MYH6P13533 1939 aa13.52□□□□□ -0.24
CSMD2-202ENST00000338325 B4DLN1 442 aa13.52□□□□□ -0.25
CSMD2-202ENST00000338325 BAIAP3O94812 1187 aa13.52□□□□□ -0.25
CSMD2-202ENST00000338325 ARHGEF15O94989 841 aa13.52□□□□□ -0.25
CSMD2-202ENST00000338325 TXNP10599 105 aaKnown RBP13.52□□□□□ -0.25
CSMD2-202ENST00000338325 MRPL12P52815 198 aaKnown RBP13.52□□□□□ -0.25
CSMD2-202ENST00000338325 HELLSQ9NRZ9 838 aa13.52□□□□□ -0.25
CSMD2-202ENST00000338325 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
CSMD2-202ENST00000338325 KRT40Q6A162 431 aa13.51□□□□□ -0.25
CSMD2-202ENST00000338325 CCDC155Q8N6L0 562 aa13.51□□□□□ -0.25
CSMD2-202ENST00000338325 FAM122AQ96E09 287 aa13.51□□□□□ -0.25
CSMD2-202ENST00000338325 PCDHB15Q9Y5E8 787 aa13.51□□□□□ -0.25
CSMD2-202ENST00000338325 SIP14410 1827 aa13.51□□□□□ -0.25
CSMD2-202ENST00000338325 LAMA4Q16363 1823 aa13.51□□□□□ -0.25
CSMD2-202ENST00000338325 ZMYM6O95789 1325 aa13.51□□□□□ -0.25
CSMD2-202ENST00000338325 TLL1O43897 1013 aa13.5□□□□□ -0.25
CSMD2-202ENST00000338325 ARIH2O95376 493 aa13.5□□□□□ -0.25
CSMD2-202ENST00000338325 FGAP02671 866 aa13.5□□□□□ -0.25
CSMD2-202ENST00000338325 SNHG28P0DPA3 235 aa13.5□□□□□ -0.25
CSMD2-202ENST00000338325 KCNJ6P48051 423 aa13.5□□□□□ -0.25
CSMD2-202ENST00000338325 GRB10Q13322 594 aa13.5□□□□□ -0.25
CSMD2-202ENST00000338325 PTGISQ16647 500 aa13.5□□□□□ -0.25
CSMD2-202ENST00000338325 CAGE1Q8TC20 777 aa13.5□□□□□ -0.25
CSMD2-202ENST00000338325 AFAP1L1Q8TED9 768 aa13.5□□□□□ -0.25
CSMD2-202ENST00000338325 EVI5LQ96CN4 794 aa13.5□□□□□ -0.25
CSMD2-202ENST00000338325 CHMP4BP1P59074 171 aa13.49□□□□□ -0.25
CSMD2-202ENST00000338325 USH1GQ495M9 461 aa13.49□□□□□ -0.25
CSMD2-202ENST00000338325 SESTD1Q86VW0 696 aa13.49□□□□□ -0.25
CSMD2-202ENST00000338325 HLA-CQ95604 372 aa13.49□□□□□ -0.25
CSMD2-202ENST00000338325 TTC14Q96N46 770 aa13.49□□□□□ -0.25
CSMD2-202ENST00000338325 MYH7BA7E2Y1 1941 aa13.49□□□□□ -0.25
CSMD2-202ENST00000338325 A0A0D9SFI3 127 aa13.49□□□□□ -0.25
CSMD2-202ENST00000338325 MMP3P08254 477 aa13.49□□□□□ -0.25
CSMD2-202ENST00000338325 WDR5P61964 334 aaKnown RBP13.49□□□□□ -0.25
CSMD2-202ENST00000338325 CCDC62Q6P9F0 684 aa13.49□□□□□ -0.25
CSMD2-202ENST00000338325 RGS22Q8NE09 1264 aa13.49□□□□□ -0.25
CSMD2-202ENST00000338325 AFG1LQ8WV93 481 aa13.49□□□□□ -0.25
CSMD2-202ENST00000338325 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
CSMD2-202ENST00000338325 LPXNO60711 386 aa13.48□□□□□ -0.25
CSMD2-202ENST00000338325 GH1P01241 217 aa13.48□□□□□ -0.25
CSMD2-202ENST00000338325 PCP11498 1178 aaKnown RBP13.48□□□□□ -0.25
CSMD2-202ENST00000338325 HAND2P61296 217 aa13.48□□□□□ -0.25
CSMD2-202ENST00000338325 ARHGAP1Q07960 439 aa13.48□□□□□ -0.25
CSMD2-202ENST00000338325 RBL2Q08999 1139 aa13.48□□□□□ -0.25
CSMD2-202ENST00000338325 MCMDC2Q4G0Z9 681 aa13.48□□□□□ -0.25
CSMD2-202ENST00000338325 GPATCH4Q5T3I0 446 aaKnown RBP13.48□□□□□ -0.25
CSMD2-202ENST00000338325 GDF6Q6KF10 455 aaPredicted RBP13.48□□□□□ -0.25
CSMD2-202ENST00000338325 LRRC8DQ7L1W4 858 aa13.48□□□□□ -0.25
CSMD2-202ENST00000338325 SPRED2Q7Z698 418 aa13.48□□□□□ -0.25
CSMD2-202ENST00000338325 FAM227BQ96M60 508 aa13.48□□□□□ -0.25
CSMD2-202ENST00000338325 CTAGE1Q96RT6 745 aa13.48□□□□□ -0.25
CSMD2-202ENST00000338325 MAF1Q9H063 256 aa13.48□□□□□ -0.25
CSMD2-202ENST00000338325 LCHNA4D1U4 455 aa13.47□□□□□ -0.25
CSMD2-202ENST00000338325 PARNO95453 639 aaKnown RBP13.47□□□□□ -0.25
CSMD2-202ENST00000338325 HSPD1P10809 573 aaKnown RBP13.47□□□□□ -0.25
CSMD2-202ENST00000338325 SELPP16109 830 aa13.47□□□□□ -0.25
CSMD2-202ENST00000338325 GPNMBQ14956 572 aa13.47□□□□□ -0.25
CSMD2-202ENST00000338325 CNKSR3Q6P9H4 555 aa13.47□□□□□ -0.25
CSMD2-202ENST00000338325 MFSD6Q6ZSS7 791 aa13.47□□□□□ -0.25
CSMD2-202ENST00000338325 SEPT14Q6ZU15 432 aa13.47□□□□□ -0.25
CSMD2-202ENST00000338325 LRFN3Q9BTN0 628 aa13.47□□□□□ -0.25
CSMD2-202ENST00000338325 ZBED2Q9BTP6 218 aa13.47□□□□□ -0.25
CSMD2-202ENST00000338325 EPHX3Q9H6B9 360 aa13.47□□□□□ -0.25
CSMD2-202ENST00000338325 CXCL10P02778 98 aa13.46□□□□□ -0.25
CSMD2-202ENST00000338325 GOLGA8HP0CJ92 632 aa13.46□□□□□ -0.25
CSMD2-202ENST00000338325 CASTP20810 708 aaKnown RBP13.46□□□□□ -0.25
CSMD2-202ENST00000338325 DEFB103AP81534 67 aa13.46□□□□□ -0.25
CSMD2-202ENST00000338325 LY6KQ17RY6 165 aa13.46□□□□□ -0.25
CSMD2-202ENST00000338325 ANKRD45Q5TZF3 282 aa13.46□□□□□ -0.25
CSMD2-202ENST00000338325 CHST3Q7LGC8 479 aa13.46□□□□□ -0.25
CSMD2-202ENST00000338325 TMCO2Q7Z6W1 182 aaPredicted RBP13.46□□□□□ -0.25
CSMD2-202ENST00000338325 ZNF589Q86UQ0 364 aaPredicted RBP13.46□□□□□ -0.25
CSMD2-202ENST00000338325 TICAM2Q86XR7 235 aa13.46□□□□□ -0.25
CSMD2-202ENST00000338325 TBC1D10CQ8IV04 446 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms