RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 DNERQ8NFT8 737 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 RASGRP4Q8TDF6 673 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 RMDN3Q96TC7 470 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 FLRT1Q9NZU1 646 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 PCDHA6Q9UN73 950 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 RBM19Q9Y4C8 960 aaKnown RBP16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 PCDHA8Q9Y5H6 950 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 ASTN1O14525 1302 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 SPDYE3A6NKU9 549 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 EIF2AK2P19525 551 aaKnown RBP16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 KRT2P35908 639 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 LARP1BQ659C4 914 aaKnown RBP16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 FBXO18Q8NFZ0 1043 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 NSUN6Q8TEA1 469 aaKnown RBP16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 PGBD1Q96JS3 809 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 BRMS1Q9HCU9 246 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 PXMP2Q9NR77 195 aa16.13■□□□□ 0.17
APOBEC3B-202ENST00000335760 ASB14A6NK59 587 aa16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 H3BQV1 296 aa16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 FOSP01100 380 aaPredicted RBP16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 ELNP15502 786 aa16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 UBXN2AP68543 259 aa16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 AP3B2Q13367 1082 aa16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 SAFBQ15424 915 aaKnown RBP eCLIP16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 IFFO2Q5TF58 517 aa16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 OLFML2BQ68BL8 750 aa16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 MCTP2Q6DN12 878 aa16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 TRMT44Q8IYL2 757 aaKnown RBP16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 OXER1Q8TDS5 423 aa16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 TRIB2Q92519 343 aa16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 EHMT1Q9H9B1 1298 aa16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 DDX49Q9Y6V7 483 aaKnown RBP16.12■□□□□ 0.17
APOBEC3B-202ENST00000335760 B4DLN1 442 aa16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 M0R2N6 131 aa16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 PDCP20941 246 aa16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 PKN2Q16513 984 aaKnown RBP16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 MAMDC4Q6UXC1 1216 aa16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 DIS3L2Q8IYB7 885 aaKnown RBP16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 MSL3Q8N5Y2 521 aaKnown RBP16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 SLAIN1Q8ND83 568 aa16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 PXYLP1Q8TE99 480 aa16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 IWS1Q96ST2 819 aa16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 MPHOSPH6Q99547 160 aaKnown RBP16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 PDCD2LQ9BRP1 358 aa16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 TINF2Q9BSI4 451 aa16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 ANO3Q9BYT9 981 aa16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 RPTORQ8N122 1335 aa16.11■□□□□ 0.17
APOBEC3B-202ENST00000335760 LOC102724159A0A0B4J2E5 919 aa16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 BTBD18B2RXH4 712 aa16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 MYCLP12524 364 aaPredicted RBP16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 GRK4P32298 578 aa16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 CYP2C19P33261 490 aa16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 PDE4DQ08499 809 aa16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 NR5A1Q13285 461 aa16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 PGM5Q15124 567 aa16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 PWP2Q15269 919 aaKnown RBP16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 MFSD14CQ5VZR4 134 aa16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 FBXO46Q6PJ61 603 aaPredicted RBP16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 ARMCX2Q7L311 632 aa16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 IL31RAQ8NI17 732 aa16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 FRMPD4Q14CM0 1322 aa16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 SYNGAP1Q96PV0 1343 aa16.1■□□□□ 0.17
APOBEC3B-202ENST00000335760 CCDC194A0A1B0GVG4 234 aa16.09■□□□□ 0.17
APOBEC3B-202ENST00000335760 IGHA2P01877 340 aa16.09■□□□□ 0.17
APOBEC3B-202ENST00000335760 HMGCRP04035 888 aa16.09■□□□□ 0.17
APOBEC3B-202ENST00000335760 NR3C2P08235 984 aa16.09■□□□□ 0.17
APOBEC3B-202ENST00000335760 SYT1P21579 422 aa16.09■□□□□ 0.17
APOBEC3B-202ENST00000335760 EDNRBP24530 442 aa16.09■□□□□ 0.17
APOBEC3B-202ENST00000335760 TRIM32Q13049 653 aa16.09■□□□□ 0.17
APOBEC3B-202ENST00000335760 GNL2Q13823 731 aaKnown RBP16.09■□□□□ 0.17
APOBEC3B-202ENST00000335760 MORC4Q8TE76 937 aa16.09■□□□□ 0.17
APOBEC3B-202ENST00000335760 SH3TC2Q8TF17 1288 aa16.09■□□□□ 0.17
APOBEC3B-202ENST00000335760 DAXXQ9UER7 740 aaPredicted RBP16.09■□□□□ 0.17
APOBEC3B-202ENST00000335760 VPS37CA5D8V6 355 aaPredicted RBP16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 MCM3APO60318 1980 aa16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 SNAI1O95863 264 aaPredicted RBP16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 CCND2P30279 289 aa16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 NONOQ15233 471 aaKnown RBP eCLIP16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 STXBP2Q15833 593 aa16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 SLC9C1Q4G0N8 1177 aa16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 PRAMEF19Q5SWL8 479 aa16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 MCTP1Q6DN14 999 aa16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 PIK3AP1Q6ZUJ8 805 aa16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 KRT25Q7Z3Z0 450 aa16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 TNFRSF25Q93038 417 aa16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 ZFP91Q96JP5 570 aaPredicted RBP16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 CNPY2Q9Y2B0 182 aa16.08■□□□□ 0.16
APOBEC3B-202ENST00000335760 INHAP05111 366 aa16.07■□□□□ 0.16
APOBEC3B-202ENST00000335760 SREBF1P36956 1147 aa16.07■□□□□ 0.16
APOBEC3B-202ENST00000335760 ARHGAP4P98171 946 aa16.07■□□□□ 0.16
APOBEC3B-202ENST00000335760 EARS2Q5JPH6 523 aaKnown RBP16.07■□□□□ 0.16
APOBEC3B-202ENST00000335760 PCNX4Q63HM2 1172 aa16.07■□□□□ 0.16
APOBEC3B-202ENST00000335760 EEPD1Q7L9B9 569 aa16.07■□□□□ 0.16
APOBEC3B-202ENST00000335760 VSIG10LQ86VR7 867 aa16.07■□□□□ 0.16
APOBEC3B-202ENST00000335760 TBCKQ8TEA7 893 aa16.07■□□□□ 0.16
APOBEC3B-202ENST00000335760 FOXP1Q9H334 677 aaPredicted RBP16.07■□□□□ 0.16
APOBEC3B-202ENST00000335760 LRRC37A2A6NM11 1700 aa16.07■□□□□ 0.16
APOBEC3B-202ENST00000335760 KIF28PB7ZC32 967 aa16.06■□□□□ 0.16
APOBEC3B-202ENST00000335760 STX6O43752 255 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms