RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 STXBP2Q15833 593 aa14.2□□□□□ -0.14
CMTM1-203ENST00000333001 ARHGEF16Q5VV41 709 aa14.2□□□□□ -0.14
CMTM1-203ENST00000333001 HOMER1Q86YM7 354 aa14.2□□□□□ -0.14
CMTM1-203ENST00000333001 TDHQ8IZJ6 230 aa14.2□□□□□ -0.14
CMTM1-203ENST00000333001 DEFB123Q8N688 67 aa14.2□□□□□ -0.14
CMTM1-203ENST00000333001 RRP36Q96EU6 259 aaKnown RBP14.2□□□□□ -0.14
CMTM1-203ENST00000333001 NEK1Q96PY6 1258 aa14.2□□□□□ -0.14
CMTM1-203ENST00000333001 RMDN3Q96TC7 470 aa14.2□□□□□ -0.14
CMTM1-203ENST00000333001 SPZ1Q9BXG8 430 aa14.2□□□□□ -0.14
CMTM1-203ENST00000333001 SENP2Q9HC62 589 aa14.2□□□□□ -0.14
CMTM1-203ENST00000333001 SLC12A7Q9Y666 1083 aa14.2□□□□□ -0.14
CMTM1-203ENST00000333001 DNAH12Q6ZR08 3092 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 MYADML2A6NDP7 307 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 CTAGE5O15320 804 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 REC8O95072 547 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 CPT1AP50416 773 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 HSD17B4P51659 736 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 PPP2R5BQ15173 497 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 LRIT3Q3SXY7 679 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 DHX32Q7L7V1 743 aaKnown RBP14.19□□□□□ -0.14
CMTM1-203ENST00000333001 TBC1D5Q92609 795 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 TAAR1Q96RJ0 339 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 PIGSQ96S52 555 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 PRDM5Q9NQX1 630 aaPredicted RBP14.19□□□□□ -0.14
CMTM1-203ENST00000333001 POLR3EQ9NVU0 708 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 SEC63Q9UGP8 760 aaKnown RBP14.19□□□□□ -0.14
CMTM1-203ENST00000333001 UNC80Q8N2C7 3258 aa14.19□□□□□ -0.14
CMTM1-203ENST00000333001 LAMA2P24043 3122 aaKnown RBP14.19□□□□□ -0.14
CMTM1-203ENST00000333001 GCOM1H8Y6P7 765 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-203ENST00000333001 ARVCFO00192 962 aa14.18□□□□□ -0.14
CMTM1-203ENST00000333001 TLR3O15455 904 aaKnown RBP14.18□□□□□ -0.14
CMTM1-203ENST00000333001 EPB41L2O43491 1005 aaKnown RBP14.18□□□□□ -0.14
CMTM1-203ENST00000333001 CYTH3O43739 400 aa14.18□□□□□ -0.14
CMTM1-203ENST00000333001 KPNA6O60684 536 aa14.18□□□□□ -0.14
CMTM1-203ENST00000333001 PQBP1O60828 265 aaKnown RBP14.18□□□□□ -0.14
CMTM1-203ENST00000333001 EIF3JO75822 258 aaKnown RBP14.18□□□□□ -0.14
CMTM1-203ENST00000333001 POLR2MP0CAP2 368 aa14.18□□□□□ -0.14
CMTM1-203ENST00000333001 CDK7P50613 346 aa14.18□□□□□ -0.14
CMTM1-203ENST00000333001 MDM2Q00987 491 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-203ENST00000333001 SGMS1Q86VZ5 419 aa14.18□□□□□ -0.14
CMTM1-203ENST00000333001 GPHNQ9NQX3 736 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-203ENST00000333001 PDLIM7Q9NR12 457 aa14.18□□□□□ -0.14
CMTM1-203ENST00000333001 TMEM39AQ9NV64 488 aa14.18□□□□□ -0.14
CMTM1-203ENST00000333001 LRRC37A2A6NM11 1700 aa14.18□□□□□ -0.14
CMTM1-203ENST00000333001 KIAA0355O15063 1070 aa14.17□□□□□ -0.14
CMTM1-203ENST00000333001 PPP1R11O60927 126 aaPredicted RBP14.17□□□□□ -0.14
CMTM1-203ENST00000333001 TXNP10599 105 aaKnown RBP14.17□□□□□ -0.14
CMTM1-203ENST00000333001 BEX3Q00994 111 aa14.17□□□□□ -0.14
CMTM1-203ENST00000333001 KCNV1Q6PIU1 500 aa14.17□□□□□ -0.14
CMTM1-203ENST00000333001 FANCBQ8NB91 859 aa14.17□□□□□ -0.14
CMTM1-203ENST00000333001 OR6J1Q8NGC5 347 aa14.17□□□□□ -0.14
CMTM1-203ENST00000333001 PXMP2Q9NR77 195 aa14.17□□□□□ -0.14
CMTM1-203ENST00000333001 STXBP5LQ9Y2K9 1186 aa14.17□□□□□ -0.14
CMTM1-203ENST00000333001 DDX49Q9Y6V7 483 aaKnown RBP14.17□□□□□ -0.14
CMTM1-203ENST00000333001 CUL9Q8IWT3 2517 aa14.17□□□□□ -0.14
CMTM1-203ENST00000333001 TRIM43BA6NCK2 446 aa14.16□□□□□ -0.14
CMTM1-203ENST00000333001 NR3C2P08235 984 aa14.16□□□□□ -0.14
CMTM1-203ENST00000333001 RAG1P15918 1043 aa14.16□□□□□ -0.14
CMTM1-203ENST00000333001 EXOSC10Q01780 885 aaKnown RBP14.16□□□□□ -0.14
CMTM1-203ENST00000333001 FAAP100Q0VG06 881 aa14.16□□□□□ -0.14
CMTM1-203ENST00000333001 CXCL17Q6UXB2 119 aa14.16□□□□□ -0.14
CMTM1-203ENST00000333001 CUL5Q93034 780 aa14.16□□□□□ -0.14
CMTM1-203ENST00000333001 TRIM43Q96BQ3 446 aaPredicted RBP14.16□□□□□ -0.14
CMTM1-203ENST00000333001 MYL10Q9BUA6 226 aa14.16□□□□□ -0.14
CMTM1-203ENST00000333001 RBM28Q9NW13 759 aaKnown RBP14.16□□□□□ -0.14
CMTM1-203ENST00000333001 COL20A1Q9P218 1284 aa14.16□□□□□ -0.14
CMTM1-203ENST00000333001 A6NJR5 290 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 OPLAHO14841 1288 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 EIF2AK2P19525 551 aaKnown RBP14.15□□□□□ -0.14
CMTM1-203ENST00000333001 PSMA5P28066 241 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 HSPA4P34932 840 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 RCAN1P53805 252 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 IRX5P78411 483 aaPredicted RBP14.15□□□□□ -0.14
CMTM1-203ENST00000333001 FGD1P98174 961 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 ITGA7Q13683 1181 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 SLC35G1Q2M3R5 365 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 SEPT14Q6ZU15 432 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 SLC43A3Q8NBI5 491 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 BADQ92934 168 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 KCNB2Q92953 911 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 KIAA1217Q5T5P2 1943 aa14.15□□□□□ -0.14
CMTM1-203ENST00000333001 STAM2O75886 525 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 TIMP1P01033 207 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 GH1P01241 217 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 TGFB3P10600 412 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 CCND2P30279 289 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 CCDC62Q6P9F0 684 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 APOA5Q6Q788 366 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 SH3RF1Q7Z6J0 888 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 VSIG10LQ86VR7 867 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 TEX2Q8IWB9 1127 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 RASEFQ8IZ41 740 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 SRBD1Q8N5C6 995 aaKnown RBP14.14□□□□□ -0.15
CMTM1-203ENST00000333001 PDCD2LQ9BRP1 358 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 MTG1Q9BT17 334 aaPredicted RBP14.14□□□□□ -0.15
CMTM1-203ENST00000333001 LRRC2Q9BYS8 371 aa14.14□□□□□ -0.15
CMTM1-203ENST00000333001 CCDC196A0A1B0GTZ2 297 aa14.13□□□□□ -0.15
CMTM1-203ENST00000333001 PIK3CDO00329 1044 aa14.13□□□□□ -0.15
CMTM1-203ENST00000333001 ZBTB43O43298 467 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms