RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 FRMPD4Q14CM0 1322 aa13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 RPTORQ8N122 1335 aa13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 IGF2BP3O00425 579 aaKnown RBP eCLIP13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 SLC37A4O43826 429 aa13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 GCFC2P16383 781 aaKnown RBP13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 USP11P51784 963 aa13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 GRIN1Q05586 938 aa13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 MOXD1Q6UVY6 613 aa13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 CLIC6Q96NY7 704 aa13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 PARK7Q99497 189 aaKnown RBP13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 MAF1Q9H063 256 aa13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 CYP39A1Q9NYL5 469 aa13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 SRPRBQ9Y5M8 271 aaKnown RBP13.73□□□□□ -0.21
TRIM49B-201ENST00000332682 LAD1O00515 517 aa13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 CUTAO60888 179 aa13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 CYP3A4P08684 503 aa13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 CIITAP33076 1130 aa13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 BAATQ14032 418 aaPredicted RBP13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 Q3C1V9 767 aa13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 ARL6IP4Q66PJ3 421 aaKnown RBP13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 FERMT2Q96AC1 680 aa13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 MBOAT7Q96N66 472 aa13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 NAP1L4Q99733 375 aaKnown RBP13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 EHMT1Q9H9B1 1298 aa13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 ZCCHC17Q9NP64 241 aaKnown RBP13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 FBXO40Q9UH90 709 aa13.72□□□□□ -0.21
TRIM49B-201ENST00000332682 CYP3A7-CYP3A51PA0A087WV96 503 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 SLC25A27O95847 323 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 OR52Z1P0C646 297 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 LIG1P18858 919 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 ERCC3P19447 782 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 CYP3A7P24462 503 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 COPB2P35606 906 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 PRPHP41219 470 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 GCLCP48506 637 aaPredicted RBP13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 ERVK-9P63128 1117 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 ERVK-24P63145 666 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 IL17AQ16552 155 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 SHC4Q6S5L8 630 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 NCAPG2Q86XI2 1143 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 MRPS27Q92552 414 aaKnown RBP13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 R3HDMLQ9H3Y0 253 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 GOLPH3LQ9H4A5 285 aa13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 DDX25Q9UHL0 483 aaKnown RBP13.71□□□□□ -0.21
TRIM49B-201ENST00000332682 FAM86B1E9PN63 330 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 FAM86B2P0C5J1 330 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 CMA1P23946 247 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 UBXN2AP68543 259 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 IFNL1Q8IU54 200 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 CCAR1Q8IX12 1150 aaKnown RBP13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 ANKRD13CQ8N6S4 541 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 FSIP1Q8NA03 581 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 GPRC5AQ8NFJ5 357 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 IL31RAQ8NI17 732 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 LENG9Q96B70 501 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 MTMR9Q96QG7 549 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 PURBQ96QR8 312 aaKnown RBP13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 TAAR1Q96RJ0 339 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 CSRNP2Q9H175 543 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 CREBZFQ9NS37 354 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 MORF4L1Q9UBU8 362 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 PFASO15067 1338 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 ADGRA2Q96PE1 1338 aa13.7□□□□□ -0.22
TRIM49B-201ENST00000332682 VWA3AA6NCI4 1184 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 APLP1P51693 650 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 INHBEP58166 350 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 CALCRLQ16602 461 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 Q4G0T1 1027 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 RESP18Q5W5W9 173 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 CYP4F22Q6NT55 531 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 SHCBP1Q8NEM2 672 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 ZIC5Q96T25 663 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 RMDN3Q96TC7 470 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 PXMP2Q9NR77 195 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 IGLV3-22A0A075B6J6 115 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 FAM237AA0A1B0GTK4 181 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 A0A1B0GVL5 298 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 RASSF10A6NK89 507 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 NR1I2O75469 434 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 PFKFB1P16118 471 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 EIF2AK2P19525 551 aaKnown RBP13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 FAM160A1Q05DH4 1040 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 SREBF2Q12772 1141 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 PGM5Q15124 567 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 FAM110CQ1W6H9 321 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 PRR16Q569H4 304 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 SPECC1Q5M775 1068 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 PCNX4Q63HM2 1172 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 CAVIN1Q6NZI2 390 aaKnown RBP13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 CCDC73Q6ZRK6 1079 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 PAXIP1Q6ZW49 1069 aaPredicted RBP13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 ANKRD35Q8N283 1001 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 ENGASEQ8NFI3 743 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 CYP2W1Q8TAV3 490 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 HAS1Q92839 578 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 PDCD2LQ9BRP1 358 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 PORCNQ9H237 461 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms