RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 HSCBQ8IWL3 235 aa29.78■■■□□ 2.36
SMDT1-201ENST00000331479 MSL3Q8N5Y2 521 aaKnown RBP29.78■■■□□ 2.36
SMDT1-201ENST00000331479 NSUN6Q8TEA1 469 aaKnown RBP29.78■■■□□ 2.36
SMDT1-201ENST00000331479 TMEM260Q9NX78 707 aa29.78■■■□□ 2.36
SMDT1-201ENST00000331479 SYNGAP1Q96PV0 1343 aa29.78■■■□□ 2.36
SMDT1-201ENST00000331479 ASB14A6NK59 587 aa29.77■■■□□ 2.36
SMDT1-201ENST00000331479 GNA11P29992 359 aa29.77■■■□□ 2.36
SMDT1-201ENST00000331479 NPY5RQ15761 445 aa29.77■■■□□ 2.36
SMDT1-201ENST00000331479 ARHGEF16Q5VV41 709 aa29.77■■■□□ 2.36
SMDT1-201ENST00000331479 ARMC5Q96C12 935 aa29.77■■■□□ 2.36
SMDT1-201ENST00000331479 PHF20Q9BVI0 1012 aa29.77■■■□□ 2.36
SMDT1-201ENST00000331479 MYCP01106 439 aaPredicted RBP29.77■■■□□ 2.36
SMDT1-201ENST00000331479 PRKAR2AP13861 404 aaKnown RBP29.77■■■□□ 2.36
SMDT1-201ENST00000331479 EDNRBP24530 442 aa29.77■■■□□ 2.36
SMDT1-201ENST00000331479 UBXN2AP68543 259 aa29.77■■■□□ 2.36
SMDT1-201ENST00000331479 MAP3K21Q5TCX8 1036 aa29.77■■■□□ 2.36
SMDT1-201ENST00000331479 MORC4Q8TE76 937 aa29.77■■■□□ 2.36
SMDT1-201ENST00000331479 GLT8D2Q9H1C3 349 aa29.77■■■□□ 2.36
SMDT1-201ENST00000331479 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.77■■■□□ 2.36
SMDT1-201ENST00000331479 FAM184AQ8NB25 1140 aa29.76■■■□□ 2.35
SMDT1-201ENST00000331479 TRPV1Q8NER1 839 aa29.76■■■□□ 2.35
SMDT1-201ENST00000331479 RASGRP4Q8TDF6 673 aa29.76■■■□□ 2.35
SMDT1-201ENST00000331479 ZNF333Q96JL9 665 aa29.76■■■□□ 2.35
SMDT1-201ENST00000331479 PGBD1Q96JS3 809 aa29.76■■■□□ 2.35
SMDT1-201ENST00000331479 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.76■■■□□ 2.35
SMDT1-201ENST00000331479 XBP1P17861 261 aa29.75■■■□□ 2.35
SMDT1-201ENST00000331479 MTFR1Q15390 333 aa29.75■■■□□ 2.35
SMDT1-201ENST00000331479 JAKMIP3Q5VZ66 844 aa29.75■■■□□ 2.35
SMDT1-201ENST00000331479 FAM177A1Q8N128 213 aaPredicted RBP29.75■■■□□ 2.35
SMDT1-201ENST00000331479 IL31RAQ8NI17 732 aa29.75■■■□□ 2.35
SMDT1-201ENST00000331479 PDCD2LQ9BRP1 358 aa29.75■■■□□ 2.35
SMDT1-201ENST00000331479 PCDHA6Q9UN73 950 aa29.75■■■□□ 2.35
SMDT1-201ENST00000331479 PCDHA4Q9UN74 947 aa29.75■■■□□ 2.35
SMDT1-201ENST00000331479 PCDHA8Q9Y5H6 950 aa29.75■■■□□ 2.35
SMDT1-201ENST00000331479 LRRC37A2A6NM11 1700 aa29.74■■■□□ 2.35
SMDT1-201ENST00000331479 SPDYE3A6NKU9 549 aa29.74■■■□□ 2.35
SMDT1-201ENST00000331479 GJB2P29033 226 aa29.74■■■□□ 2.35
SMDT1-201ENST00000331479 PGM5Q15124 567 aa29.74■■■□□ 2.35
SMDT1-201ENST00000331479 TEX2Q8IWB9 1127 aa29.74■■■□□ 2.35
SMDT1-201ENST00000331479 KATNBL1Q9H079 304 aa29.74■■■□□ 2.35
SMDT1-201ENST00000331479 FRMPD4Q14CM0 1322 aa29.74■■■□□ 2.35
SMDT1-201ENST00000331479 RPTORQ8N122 1335 aa29.74■■■□□ 2.35
SMDT1-201ENST00000331479 LOC102724159A0A0B4J2E5 919 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 CYBAP13498 195 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 PWP2Q15269 919 aaKnown RBP29.73■■■□□ 2.35
SMDT1-201ENST00000331479 EEPD1Q7L9B9 569 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 REXO1Q8N1G1 1221 aaKnown RBP29.73■■■□□ 2.35
SMDT1-201ENST00000331479 BICD2Q8TD16 824 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 IWS1Q96ST2 819 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 SMC3Q9UQE7 1217 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 NR3C2P08235 984 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 CCND3P30281 292 aaPredicted RBP29.73■■■□□ 2.35
SMDT1-201ENST00000331479 GUCY1B3Q02153 619 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 PDE4DQ08499 809 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 BLIDQ8IZY5 108 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 DAGLBQ8NCG7 672 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 FOXD4L1Q9NU39 408 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 CNPY2Q9Y2B0 182 aa29.73■■■□□ 2.35
SMDT1-201ENST00000331479 M0R2N6 131 aa29.72■■■□□ 2.35
SMDT1-201ENST00000331479 ZNF865P0CJ78 1059 aaPredicted RBP29.72■■■□□ 2.35
SMDT1-201ENST00000331479 KRT40Q6A162 431 aa29.72■■■□□ 2.35
SMDT1-201ENST00000331479 FBXO16Q8IX29 292 aaPredicted RBP29.72■■■□□ 2.35
SMDT1-201ENST00000331479 ZFP91Q96JP5 570 aaPredicted RBP29.72■■■□□ 2.35
SMDT1-201ENST00000331479 C8orf76Q96K31 380 aa29.72■■■□□ 2.35
SMDT1-201ENST00000331479 ANO3Q9BYT9 981 aa29.72■■■□□ 2.35
SMDT1-201ENST00000331479 UNC93B1Q9H1C4 597 aa29.72■■■□□ 2.35
SMDT1-201ENST00000331479 MYCLP12524 364 aaPredicted RBP29.71■■■□□ 2.35
SMDT1-201ENST00000331479 AP3B2Q13367 1082 aa29.71■■■□□ 2.35
SMDT1-201ENST00000331479 ACVR2BQ13705 512 aa29.71■■■□□ 2.35
SMDT1-201ENST00000331479 GALNT17Q6IS24 598 aa29.71■■■□□ 2.35
SMDT1-201ENST00000331479 OXER1Q8TDS5 423 aa29.71■■■□□ 2.35
SMDT1-201ENST00000331479 MPHOSPH6Q99547 160 aaKnown RBP29.71■■■□□ 2.35
SMDT1-201ENST00000331479 ABHD16BQ9H3Z7 469 aa29.71■■■□□ 2.35
SMDT1-201ENST00000331479 FOSP01100 380 aaPredicted RBP29.7■■■□□ 2.35
SMDT1-201ENST00000331479 TRIM29Q14134 588 aa29.7■■■□□ 2.35
SMDT1-201ENST00000331479 VSIG10LQ86VR7 867 aa29.7■■■□□ 2.35
SMDT1-201ENST00000331479 INTS4Q96HW7 963 aaKnown RBP29.7■■■□□ 2.35
SMDT1-201ENST00000331479 HMX1Q9NP08 348 aaPredicted RBP29.7■■■□□ 2.35
SMDT1-201ENST00000331479 ZHX1Q9UKY1 873 aaPredicted RBP29.7■■■□□ 2.35
SMDT1-201ENST00000331479 B4DLN1 442 aa29.69■■■□□ 2.34
SMDT1-201ENST00000331479 MMP1P03956 469 aa29.69■■■□□ 2.34
SMDT1-201ENST00000331479 CCL5P13501 91 aa29.69■■■□□ 2.34
SMDT1-201ENST00000331479 STXBP2Q15833 593 aa29.69■■■□□ 2.34
SMDT1-201ENST00000331479 TNS4Q8IZW8 715 aa29.69■■■□□ 2.34
SMDT1-201ENST00000331479 NRBP1Q9UHY1 535 aa29.69■■■□□ 2.34
SMDT1-201ENST00000331479 MRPS9P82933 396 aaKnown RBP29.69■■■□□ 2.34
SMDT1-201ENST00000331479 PDGFCQ9NRA1 345 aa29.69■■■□□ 2.34
SMDT1-201ENST00000331479 CNGA1P29973 690 aa29.68■■■□□ 2.34
SMDT1-201ENST00000331479 TAPT1Q6NXT6 567 aa29.68■■■□□ 2.34
SMDT1-201ENST00000331479 FBXO18Q8NFZ0 1043 aa29.68■■■□□ 2.34
SMDT1-201ENST00000331479 CCND2P30279 289 aa29.67■■■□□ 2.34
SMDT1-201ENST00000331479 PCNX4Q63HM2 1172 aa29.67■■■□□ 2.34
SMDT1-201ENST00000331479 ABHD8Q96I13 439 aa29.67■■■□□ 2.34
SMDT1-201ENST00000331479 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.67■■■□□ 2.34
SMDT1-201ENST00000331479 RNF208Q9H0X6 261 aa29.67■■■□□ 2.34
SMDT1-201ENST00000331479 VTA1Q9NP79 307 aa29.67■■■□□ 2.34
SMDT1-201ENST00000331479 EIF3JO75822 258 aaKnown RBP29.66■■■□□ 2.34
SMDT1-201ENST00000331479 KRT2P35908 639 aa29.66■■■□□ 2.34
SMDT1-201ENST00000331479 SREBF1P36956 1147 aa29.66■■■□□ 2.34
SMDT1-201ENST00000331479 NR5A1Q13285 461 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms