RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 HUNKP57058 714 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 BAATQ14032 418 aaPredicted RBP17.82■□□□□ 0.44
PDGFB-201ENST00000331163 WNK4Q96J92 1243 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 MTA3Q9BTC8 594 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 KIF20AO95235 890 aa17.81■□□□□ 0.44
PDGFB-201ENST00000331163 CDCA5Q96FF9 252 aa17.81■□□□□ 0.44
PDGFB-201ENST00000331163 RMDN3Q96TC7 470 aa17.81■□□□□ 0.44
PDGFB-201ENST00000331163 CTTNQ14247 550 aaKnown RBP17.81■□□□□ 0.44
PDGFB-201ENST00000331163 LRRC41Q15345 812 aa17.81■□□□□ 0.44
PDGFB-201ENST00000331163 TMEM132AQ24JP5 1023 aa17.81■□□□□ 0.44
PDGFB-201ENST00000331163 KIAA1468Q9P260 1216 aa17.81■□□□□ 0.44
PDGFB-201ENST00000331163 CENPFP49454 3210 aa17.81■□□□□ 0.44
PDGFB-201ENST00000331163 PTPRAP18433 802 aa17.81■□□□□ 0.44
PDGFB-201ENST00000331163 TATDN1Q6P1N9 297 aa17.81■□□□□ 0.44
PDGFB-201ENST00000331163 KRBA2Q6ZNG9 492 aa17.81■□□□□ 0.44
PDGFB-201ENST00000331163 IL17RAQ96F46 866 aa17.81■□□□□ 0.44
PDGFB-201ENST00000331163 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.81■□□□□ 0.44
PDGFB-201ENST00000331163 NCBP1Q09161 790 aaKnown RBP17.8■□□□□ 0.44
PDGFB-201ENST00000331163 PLCD3Q8N3E9 789 aa17.8■□□□□ 0.44
PDGFB-201ENST00000331163 PTPREP23469 700 aa17.8■□□□□ 0.44
PDGFB-201ENST00000331163 BACE1P56817 501 aa17.8■□□□□ 0.44
PDGFB-201ENST00000331163 FKBP1AP62942 108 aaKnown RBP17.8■□□□□ 0.44
PDGFB-201ENST00000331163 MCM6Q14566 821 aa17.8■□□□□ 0.44
PDGFB-201ENST00000331163 RGL1Q9NZL6 768 aa17.8■□□□□ 0.44
PDGFB-201ENST00000331163 CNTNAP1P78357 1384 aa17.8■□□□□ 0.44
PDGFB-201ENST00000331163 PLCG1P19174 1290 aa17.8■□□□□ 0.44
PDGFB-201ENST00000331163 RNF207Q6ZRF8 634 aa17.8■□□□□ 0.44
PDGFB-201ENST00000331163 FAM200AQ8TCP9 573 aa17.8■□□□□ 0.44
PDGFB-201ENST00000331163 ZNF668Q96K58 619 aaPredicted RBP17.8■□□□□ 0.44
PDGFB-201ENST00000331163 SPTLC3Q9NUV7 552 aa17.8■□□□□ 0.44
PDGFB-201ENST00000331163 BMP15O95972 392 aa17.79■□□□□ 0.44
PDGFB-201ENST00000331163 PGK2P07205 417 aa17.79■□□□□ 0.44
PDGFB-201ENST00000331163 ATL3Q6DD88 541 aa17.79■□□□□ 0.44
PDGFB-201ENST00000331163 SLC39A2Q9NP94 309 aa17.79■□□□□ 0.44
PDGFB-201ENST00000331163 CTAGE5O15320 804 aa17.79■□□□□ 0.44
PDGFB-201ENST00000331163 USP14P54578 494 aa17.79■□□□□ 0.44
PDGFB-201ENST00000331163 OPTNQ96CV9 577 aa17.79■□□□□ 0.44
PDGFB-201ENST00000331163 EXOC1Q9NV70 894 aa17.79■□□□□ 0.44
PDGFB-201ENST00000331163 N4BP2Q86UW6 1770 aaPredicted RBP17.79■□□□□ 0.44
PDGFB-201ENST00000331163 SNED1Q8TER0 1413 aa17.79■□□□□ 0.44
PDGFB-201ENST00000331163 BCORQ6W2J9 1755 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 PDE4DQ08499 809 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 AXDND1Q5T1B0 1012 aaPredicted RBP17.78■□□□□ 0.44
PDGFB-201ENST00000331163 LRCH2Q5VUJ6 765 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 FAM177A1Q8N128 213 aaPredicted RBP17.78■□□□□ 0.44
PDGFB-201ENST00000331163 MRIQ9BWK5 157 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 ZMYND12Q9H0C1 365 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 GPBP1L1Q9HC44 474 aaPredicted RBP17.78■□□□□ 0.44
PDGFB-201ENST00000331163 FBXO2Q9UK22 296 aaPredicted RBP17.78■□□□□ 0.44
PDGFB-201ENST00000331163 SRPRBQ9Y5M8 271 aaKnown RBP17.78■□□□□ 0.44
PDGFB-201ENST00000331163 IVNS1ABPQ9Y6Y0 642 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 GTF2F1P35269 517 aaKnown RBP eCLIP17.78■□□□□ 0.44
PDGFB-201ENST00000331163 ARID5BQ14865 1188 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 FBXL16Q8N461 479 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 FERMT2Q96AC1 680 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 RIOX1Q9H6W3 641 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 CTNND2Q9UQB3 1225 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 RPS6P62753 249 aaKnown RBP17.78■□□□□ 0.44
PDGFB-201ENST00000331163 FMR1NBQ8N0W7 255 aaPredicted RBP17.78■□□□□ 0.44
PDGFB-201ENST00000331163 C2orf69Q8N8R5 385 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 ZNF577Q9BSK1 485 aa17.78■□□□□ 0.44
PDGFB-201ENST00000331163 POTEB3A0JP26 581 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 POTEFA5A3E0 1075 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 GLTPD2A6NH11 291 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 POTECB2RU33 542 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 PTPAQ15257 358 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 MUM1L1Q5H9M0 696 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 POTEBQ6S5H4 581 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 POTEGQ6S5H5 508 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 POTEEQ6S8J3 1075 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 TRIM47Q96LD4 638 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 EHMT1Q9H9B1 1298 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 SCN9AQ15858 1988 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 E9PMD0 336 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 CUL4BQ13620 913 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 COG2Q14746 738 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 PPP1R13LQ8WUF5 828 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 PPP1R16BQ96T49 567 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 FEM1BQ9UK73 627 aa17.77■□□□□ 0.44
PDGFB-201ENST00000331163 ZNF157P51786 506 aaPredicted RBP17.77■□□□□ 0.43
PDGFB-201ENST00000331163 TREML2Q5T2D2 321 aa17.77■□□□□ 0.43
PDGFB-201ENST00000331163 ANKRD13CQ8N6S4 541 aa17.77■□□□□ 0.43
PDGFB-201ENST00000331163 TAAR1Q96RJ0 339 aa17.77■□□□□ 0.43
PDGFB-201ENST00000331163 TAF1DQ9H5J8 278 aaPredicted RBP17.77■□□□□ 0.43
PDGFB-201ENST00000331163 IFNKQ9P0W0 207 aa17.77■□□□□ 0.43
PDGFB-201ENST00000331163 RIPK3Q9Y572 518 aa17.77■□□□□ 0.43
PDGFB-201ENST00000331163 RCAN1P53805 252 aa17.76■□□□□ 0.43
PDGFB-201ENST00000331163 HERC4Q5GLZ8 1057 aaPredicted RBP17.76■□□□□ 0.43
PDGFB-201ENST00000331163 KLRG1Q96E93 195 aa17.76■□□□□ 0.43
PDGFB-201ENST00000331163 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.76■□□□□ 0.43
PDGFB-201ENST00000331163 ST7Q9NRC1 585 aa17.76■□□□□ 0.43
PDGFB-201ENST00000331163 EMILIN3Q9NT22 766 aa17.76■□□□□ 0.43
PDGFB-201ENST00000331163 PPP6R2O75170 966 aa17.76■□□□□ 0.43
PDGFB-201ENST00000331163 TCERG1LQ5VWI1 586 aa17.76■□□□□ 0.43
PDGFB-201ENST00000331163 BANK1Q8NDB2 785 aa17.76■□□□□ 0.43
PDGFB-201ENST00000331163 MAP3K14Q99558 947 aa17.76■□□□□ 0.43
PDGFB-201ENST00000331163 MARK3P27448 753 aa17.75■□□□□ 0.43
PDGFB-201ENST00000331163 ZNF280AP59817 542 aaPredicted RBP17.75■□□□□ 0.43
PDGFB-201ENST00000331163 SV2BQ7L1I2 683 aa17.75■□□□□ 0.43
PDGFB-201ENST00000331163 TMC6Q7Z403 805 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms