RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 MATR3P43243 847 aaKnown RBP eCLIP15.65■□□□□ 0.1
ATP2C1-201ENST00000328560 TMEM266Q2M3C6 531 aa15.65■□□□□ 0.1
ATP2C1-201ENST00000328560 C7orf25Q9BPX7 421 aa15.65■□□□□ 0.1
ATP2C1-201ENST00000328560 NUDT12Q9BQG2 462 aa15.65■□□□□ 0.1
ATP2C1-201ENST00000328560 CALCOCO1Q9P1Z2 691 aa15.65■□□□□ 0.1
ATP2C1-201ENST00000328560 SCN7AQ01118 1682 aa15.65■□□□□ 0.1
ATP2C1-201ENST00000328560 SLURP2P0DP57 97 aa15.64■□□□□ 0.1
ATP2C1-201ENST00000328560 FAM193AP78312 1265 aa15.64■□□□□ 0.1
ATP2C1-201ENST00000328560 NUP58Q9BVL2 599 aa15.64■□□□□ 0.1
ATP2C1-201ENST00000328560 UBXN6Q9BZV1 441 aa15.64■□□□□ 0.1
ATP2C1-201ENST00000328560 RAB21Q9UL25 225 aa15.64■□□□□ 0.1
ATP2C1-201ENST00000328560 FAN1Q9Y2M0 1017 aa15.64■□□□□ 0.1
ATP2C1-201ENST00000328560 GPR75-ASB3A0A0A6YYF3 556 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 MAP2K7O14733 419 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 ADCY7P51828 1080 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 RAD51AP2Q09MP3 1159 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 GRB10Q13322 594 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 ENOX2Q16206 610 aaKnown RBP15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 GSPT2Q8IYD1 628 aaKnown RBP15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 GLIS3Q8NEA6 775 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 GBP3Q9H0R5 595 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 ZHX3Q9H4I2 956 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 AKR1B10O60218 316 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 NT5C2P49902 561 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 DNA2P51530 1060 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 NAP1L1P55209 391 aaKnown RBP15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 TRAPPC11Q7Z392 1133 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 SEPT12Q8IYM1 358 aa15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 LARP4BQ92615 738 aaKnown RBP15.64■□□□□ 0.09
ATP2C1-201ENST00000328560 EPHB6O15197 1021 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 PDHBP11177 359 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 AKR1B1P15121 316 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 MIIPQ5JXC2 388 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 TAF3Q5VWG9 929 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 RRAGAQ7L523 313 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 CCDC155Q8N6L0 562 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 PSMD14O00487 310 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 ZBTB22O15209 634 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 BBOX1O75936 387 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 ADRA2BP18089 450 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 KRT79Q5XKE5 535 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 TTBK2Q6IQ55 1244 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 TBC1D22AQ8WUA7 517 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 HNRNPLLQ8WVV9 542 aaKnown RBP15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 RHBDL3P58872 404 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 TXLNBQ8N3L3 684 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 ZC3H12CQ9C0D7 883 aaKnown RBP15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 NDST4Q9H3R1 872 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 MLXIPQ9HAP2 919 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 MAGEF1Q9HAY2 307 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 BLOC1S4Q9NUP1 217 aa15.63■□□□□ 0.09
ATP2C1-201ENST00000328560 LAMB2P55268 1798 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 ROBO3Q96MS0 1386 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 SCNN1DP51172 638 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 CACNB1Q02641 598 aaPredicted RBP15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 SKIDA1Q1XH10 827 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 CACNA2D4Q7Z3S7 1137 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 KCNK18Q7Z418 384 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 SECISBP2LQ93073 1101 aaKnown RBP15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 MXD3Q9BW11 206 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 IFIH1Q9BYX4 1025 aaKnown RBP15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 KANSL2Q9H9L4 492 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 NLRC4Q9NPP4 1024 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 LRRIQ3A6PVS8 624 aaPredicted RBP15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 CXCR5P32302 372 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 C2orf54Q08AI8 447 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 EHBP1Q8NDI1 1231 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 DDX12PQ92771 950 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 PNMA5Q96PV4 448 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 POLLQ9UGP5 575 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 VWA3BQ502W6 1294 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 TDRD12Q587J7 1177 aaKnown RBP15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 KCTD1Q719H9 257 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 TTYH3Q9C0H2 523 aa15.62■□□□□ 0.09
ATP2C1-201ENST00000328560 MOCS3O95396 460 aa15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 EIF4A3P38919 411 aaKnown RBP15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 TUBB4BP68371 445 aa15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 MEA1Q16626 185 aa15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 NELFCDQ8IXH7 590 aa15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 RETREG2Q8NC44 543 aa15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 TRIM34Q9BYJ4 488 aa15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 RAB34Q9BZG1 259 aa15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 EIF3CLB5ME19 914 aaKnown RBP15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 USO1O60763 962 aaKnown RBP15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 CAPN2P17655 700 aa15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 USP14P54578 494 aa15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 EIF3CQ99613 913 aaKnown RBP15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 CRACR2AQ9BSW2 395 aa15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 MTMR4Q9NYA4 1195 aa15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 SNED1Q8TER0 1413 aa15.61■□□□□ 0.09
ATP2C1-201ENST00000328560 PDE2AO00408 941 aaPredicted RBP15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 ZNF263O14978 683 aa15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 ARID5AQ03989 594 aa15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 SMARCAL1Q9NZC9 954 aa15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 DAGLAQ9Y4D2 1042 aa15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 TRAF5O00463 557 aa15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 ZSCAN26Q16670 478 aa15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 CCDC40Q4G0X9 1142 aa15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 UNC13DQ70J99 1090 aa15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 CCDC170Q8IYT3 715 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms