RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 CCDC84Q86UT8 332 aaPredicted RBP12.49□□□□□ -0.41
GINS3-202ENST00000328514 IQCA1Q86XH1 822 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
GINS3-202ENST00000328514 SRBD1Q8N5C6 995 aaKnown RBP12.49□□□□□ -0.41
GINS3-202ENST00000328514 CCDC43Q96MW1 224 aaKnown RBP12.49□□□□□ -0.41
GINS3-202ENST00000328514 QTRT2Q9H974 415 aaKnown RBP12.49□□□□□ -0.41
GINS3-202ENST00000328514 ANKRD36CQ5JPF3 1778 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 hCG_1642624A0A1W2PR95 340 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 MYBP10242 640 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 YY1P25490 414 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 EIF4A3P38919 411 aaKnown RBP12.48□□□□□ -0.41
GINS3-202ENST00000328514 CARSP49589 748 aaKnown RBP12.48□□□□□ -0.41
GINS3-202ENST00000328514 ATP1A2P50993 1020 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 NLRP5P59047 1200 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 ANKRD40Q6AI12 368 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 FOXR2Q6PJQ5 311 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 DTHD1Q6ZMT9 781 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
GINS3-202ENST00000328514 P3H4Q92791 437 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 NOX5Q96PH1 765 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 PLCB1Q9NQ66 1216 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 SUFUQ9UMX1 484 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 MYH10P35580 1976 aa12.48□□□□□ -0.41
GINS3-202ENST00000328514 M0R2N6 131 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 HOXA7P31268 230 aaPredicted RBP12.47□□□□□ -0.41
GINS3-202ENST00000328514 RDXP35241 583 aaKnown RBP12.47□□□□□ -0.41
GINS3-202ENST00000328514 MTIF2P46199 727 aaKnown RBP12.47□□□□□ -0.41
GINS3-202ENST00000328514 MRPL12P52815 198 aaKnown RBP12.47□□□□□ -0.41
GINS3-202ENST00000328514 CDC37Q16543 378 aaPredicted RBP12.47□□□□□ -0.41
GINS3-202ENST00000328514 KCTD16Q68DU8 428 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 TYW1BQ6NUM6 668 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 ARMC9Q7Z3E5 817 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 C2CD5Q86YS7 1000 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 CCDC47Q96A33 483 aaKnown RBP12.47□□□□□ -0.41
GINS3-202ENST00000328514 C7orf25Q9BPX7 421 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 HINFPQ9BQA5 517 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 BRIP1Q9BX63 1249 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 TMBIM4Q9HC24 238 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 NFU1Q9UMS0 254 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 C5orf60A6NFR6 353 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 BHMG1C9JSJ3 638 aaPredicted RBP12.47□□□□□ -0.41
GINS3-202ENST00000328514 CES2O00748 559 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 AKR1B10O60218 316 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 HEXIM1O94992 359 aaKnown RBP12.47□□□□□ -0.41
GINS3-202ENST00000328514 PAEPP09466 180 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 FAM153BP0C7A2 387 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 ELF1P32519 619 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 UBA7P41226 1012 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 MATR3P43243 847 aaKnown RBP eCLIP12.47□□□□□ -0.41
GINS3-202ENST00000328514 MAGEA1P43355 309 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 FAM153CQ494X1 144 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 VWA3BQ502W6 1294 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 CENPPQ6IPU0 288 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 SYN2Q92777 582 aaPredicted RBP12.47□□□□□ -0.41
GINS3-202ENST00000328514 AK8Q96MA6 479 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 TRIM9Q9C026 710 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 SLC40A1Q9NP59 571 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 FAM153AQ9UHL3 310 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 SLC12A6Q9UHW9 1150 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 SALL4Q9UJQ4 1053 aa12.47□□□□□ -0.41
GINS3-202ENST00000328514 GOLGA6L7A0A1B0GV03 622 aa12.46□□□□□ -0.42
GINS3-202ENST00000328514 ORC4O43929 436 aa12.46□□□□□ -0.42
GINS3-202ENST00000328514 HDLBPQ00341 1268 aaKnown RBP12.46□□□□□ -0.42
GINS3-202ENST00000328514 LACTB2Q53H82 288 aaPredicted RBP12.46□□□□□ -0.42
GINS3-202ENST00000328514 BLIDQ8IZY5 108 aa12.46□□□□□ -0.42
GINS3-202ENST00000328514 GIMAP7Q8NHV1 300 aa12.46□□□□□ -0.42
GINS3-202ENST00000328514 BAP1Q92560 729 aa12.46□□□□□ -0.42
GINS3-202ENST00000328514 MTMR8Q96EF0 704 aa12.46□□□□□ -0.42
GINS3-202ENST00000328514 CYFIP2Q96F07 1278 aa12.46□□□□□ -0.42
GINS3-202ENST00000328514 PCMTD1Q96MG8 357 aaPredicted RBP12.46□□□□□ -0.42
GINS3-202ENST00000328514 EPB41L5Q9HCM4 733 aa12.46□□□□□ -0.42
GINS3-202ENST00000328514 TMEM59LQ9UK28 342 aa12.46□□□□□ -0.42
GINS3-202ENST00000328514 PCDHA4Q9UN74 947 aa12.46□□□□□ -0.42
GINS3-202ENST00000328514 NHSL1Q5SYE7 1610 aa12.46□□□□□ -0.42
GINS3-202ENST00000328514 FLT1P17948 1338 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 MINDY4BA8MYZ0 360 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 TRAPPC3O43617 180 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 CXCR5P32302 372 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 GUCY2DQ02846 1103 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 STK4Q13043 487 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 IFT88Q13099 833 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 BIRC3Q13489 604 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 MAN2A1Q16706 1144 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 CEP85LQ5SZL2 805 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 GALNT17Q6IS24 598 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 DAGLBQ8NCG7 672 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 CASKIN2Q8WXE0 1202 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 INPP4AQ96PE3 977 aaPredicted RBP12.45□□□□□ -0.42
GINS3-202ENST00000328514 RIOK1Q9BRS2 568 aaKnown RBP12.45□□□□□ -0.42
GINS3-202ENST00000328514 NUCKS1Q9H1E3 243 aaKnown RBP12.45□□□□□ -0.42
GINS3-202ENST00000328514 NDST4Q9H3R1 872 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 CD248Q9HCU0 757 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 SMARCAL1Q9NZC9 954 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 EHD2Q9NZN4 543 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.45□□□□□ -0.42
GINS3-202ENST00000328514 PCDHGC5Q9Y5F6 944 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 GMNCA6NCL1 334 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 H0YGN5 161 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 EPHB6O15197 1021 aa12.45□□□□□ -0.42
GINS3-202ENST00000328514 CDR1P51861 262 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms