RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 MESDQ14696 234 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 CHP1Q99653 195 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 CEP170BQ9Y4F5 1589 aaPredicted RBP18.12■□□□□ 0.49
CLIP4-201ENST00000320081 LAMC1P11047 1609 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 TTC26A0AVF1 554 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 E9PMD0 336 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 GFPT2O94808 682 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 TDP2O95551 362 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 TTLL1O95922 423 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 KLRK1P26718 216 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 CTTNQ14247 550 aaKnown RBP18.12■□□□□ 0.49
CLIP4-201ENST00000320081 ZNF354CQ86Y25 554 aa18.12■□□□□ 0.49
CLIP4-201ENST00000320081 DNAJC17Q9NVM6 304 aaKnown RBP18.12■□□□□ 0.49
CLIP4-201ENST00000320081 ST3GAL1Q11201 340 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 DCUN1D2Q6PH85 259 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 EEPD1Q7L9B9 569 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 AP1M1Q9BXS5 423 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 AGTPBP1Q9UPW5 1226 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 RABGAP1Q9Y3P9 1069 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 INPP5BP32019 993 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 FKBP3Q00688 224 aaKnown RBP18.11■□□□□ 0.49
CLIP4-201ENST00000320081 LRCH2Q5VUJ6 765 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 NDST4Q9H3R1 872 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 PICK1Q9NRD5 415 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 PACSIN2Q9UNF0 486 aaPredicted RBP18.11■□□□□ 0.49
CLIP4-201ENST00000320081 TSGA10IPQ3SY00 556 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 ARHGEF1Q92888 912 aaKnown RBP18.11■□□□□ 0.49
CLIP4-201ENST00000320081 AMNQ9BXJ7 453 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 TRIM10Q9UDY6 481 aa18.11■□□□□ 0.49
CLIP4-201ENST00000320081 WTIPA6NIX2 430 aaPredicted RBP18.1■□□□□ 0.49
CLIP4-201ENST00000320081 ZSCAN20P17040 1043 aaPredicted RBP18.1■□□□□ 0.49
CLIP4-201ENST00000320081 CCNE1P24864 410 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 PPP1R21Q6ZMI0 780 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 DDX12PQ92771 950 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 MXD3Q9BW11 206 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 QTRT2Q9H974 415 aaKnown RBP18.1■□□□□ 0.49
CLIP4-201ENST00000320081 MLXIPQ9HAP2 919 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 AMFRQ9UKV5 643 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 LEMD3Q9Y2U8 911 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 CAMSAP1Q5T5Y3 1602 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 GOLGA8IPA6NC78 632 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 GOLGA8JA6NMD2 632 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 HEXIM1O94992 359 aaKnown RBP18.1■□□□□ 0.49
CLIP4-201ENST00000320081 TRAPPC10P48553 1259 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 GBP6Q6ZN66 633 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 NEXMIFQ5QGS0 1516 aa18.1■□□□□ 0.49
CLIP4-201ENST00000320081 PPEF1O14829 653 aaPredicted RBP18.09■□□□□ 0.49
CLIP4-201ENST00000320081 USP17L10C9JJH3 530 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 NCK2O43639 380 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 STAT3P40763 770 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 SLCO1A2P46721 670 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 TUBB4BP68371 445 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 BSPRYQ5W0U4 402 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.09■□□□□ 0.49
CLIP4-201ENST00000320081 GLG1Q92896 1179 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 VTI1AQ96AJ9 217 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 TDRD3Q9H7E2 651 aaKnown RBP18.09■□□□□ 0.49
CLIP4-201ENST00000320081 EMILIN3Q9NT22 766 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 SAMD15Q9P1V8 674 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 ADAMTS13Q76LX8 1427 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 SMIM22K7EJ46 135 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 SEMA3EO15041 775 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 ALDH1B1P30837 517 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 ANKS4BQ8N8V4 417 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 IFT74Q96LB3 600 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 CCPG1Q9ULG6 757 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 HPS5Q9UPZ3 1129 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 ACTN4O43707 911 aaKnown RBP18.09■□□□□ 0.49
CLIP4-201ENST00000320081 GH2P01242 217 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 MMP10P09238 476 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 CCZ1BP86790 482 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 CCZ1P86791 482 aaPredicted RBP18.09■□□□□ 0.49
CLIP4-201ENST00000320081 NFIXQ14938 502 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 KAZNQ674X7 775 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 NLRX1Q86UT6 975 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 CD209Q9NNX6 404 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 RWDD2AQ9UIY3 292 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 CEP83Q9Y592 693 aa18.09■□□□□ 0.49
CLIP4-201ENST00000320081 RNF40O75150 1001 aa18.08■□□□□ 0.49
CLIP4-201ENST00000320081 EEF1GP26641 437 aaKnown RBP18.08■□□□□ 0.49
CLIP4-201ENST00000320081 KIF11P52732 1056 aa18.08■□□□□ 0.49
CLIP4-201ENST00000320081 TTBK2Q6IQ55 1244 aa18.08■□□□□ 0.49
CLIP4-201ENST00000320081 TMC4Q7Z404 712 aa18.08■□□□□ 0.49
CLIP4-201ENST00000320081 PROCA1Q8NCQ7 364 aaPredicted RBP18.08■□□□□ 0.49
CLIP4-201ENST00000320081 ANKFY1Q9P2R3 1169 aa18.08■□□□□ 0.49
CLIP4-201ENST00000320081 POTEB3A0JP26 581 aa18.08■□□□□ 0.48
CLIP4-201ENST00000320081 POTECB2RU33 542 aa18.08■□□□□ 0.48
CLIP4-201ENST00000320081 NOP56O00567 594 aaKnown RBP18.08■□□□□ 0.48
CLIP4-201ENST00000320081 POLR2MP0CAP2 368 aa18.08■□□□□ 0.48
CLIP4-201ENST00000320081 TCP1P17987 556 aaKnown RBP18.08■□□□□ 0.48
CLIP4-201ENST00000320081 PPFIA1Q13136 1202 aa18.08■□□□□ 0.48
CLIP4-201ENST00000320081 POTEBQ6S5H4 581 aa18.08■□□□□ 0.48
CLIP4-201ENST00000320081 PRDM4Q9UKN5 801 aa18.08■□□□□ 0.48
CLIP4-201ENST00000320081 SALL3Q9BXA9 1300 aa18.08■□□□□ 0.48
CLIP4-201ENST00000320081 MB21D1Q8N884 522 aa18.08■□□□□ 0.48
CLIP4-201ENST00000320081 SH2D4AQ9H788 454 aa18.08■□□□□ 0.48
CLIP4-201ENST00000320081 CFAP74Q9C0B2 1584 aa18.08■□□□□ 0.48
CLIP4-201ENST00000320081 PLA2G4BP0C869 781 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 BCRP11274 1271 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms