RNA–Protein interactions for RNA: ENST00000312295.4

RTP1-201, Transcript of receptor transporter protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1-201ENST00000312295 STAT3P40763 770 aa17.08■□□□□ 0.32
RTP1-201ENST00000312295 USP14P54578 494 aa17.08■□□□□ 0.32
RTP1-201ENST00000312295 DPYDQ12882 1025 aa17.08■□□□□ 0.32
RTP1-201ENST00000312295 TMEM266Q2M3C6 531 aa17.08■□□□□ 0.32
RTP1-201ENST00000312295 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
RTP1-201ENST00000312295 PTMAP06454 111 aaKnown RBP17.07■□□□□ 0.32
RTP1-201ENST00000312295 SREBF1P36956 1147 aa17.07■□□□□ 0.32
RTP1-201ENST00000312295 TTLL12Q14166 644 aaPredicted RBP17.07■□□□□ 0.32
RTP1-201ENST00000312295 MUM1L1Q5H9M0 696 aa17.07■□□□□ 0.32
RTP1-201ENST00000312295 CRYGNQ8WXF5 182 aa17.07■□□□□ 0.32
RTP1-201ENST00000312295 WDR18Q9BV38 432 aa17.07■□□□□ 0.32
RTP1-201ENST00000312295 MRPL11Q9Y3B7 192 aaKnown RBP17.07■□□□□ 0.32
RTP1-201ENST00000312295 WDR90Q96KV7 1748 aa17.07■□□□□ 0.32
RTP1-201ENST00000312295 CAVIN2O95810 425 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 POTEIP0CG38 1075 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 POTEJP0CG39 1038 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 SARSP49591 514 aaKnown RBP17.06■□□□□ 0.32
RTP1-201ENST00000312295 ORC2Q13416 577 aaPredicted RBP17.06■□□□□ 0.32
RTP1-201ENST00000312295 CDCA5Q96FF9 252 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 CLMNQ96JQ2 1002 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 TRIM5Q9C035 493 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 SLC38A10Q9HBR0 1119 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 GINM1Q9NU53 330 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 CTDP1Q9Y5B0 961 aaPredicted RBP17.06■□□□□ 0.32
RTP1-201ENST00000312295 PARP14Q460N5 1801 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 ABCB11O95342 1321 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 PEX10O60683 326 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 COBLO75128 1261 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 GCFC2P16383 781 aaKnown RBP17.06■□□□□ 0.32
RTP1-201ENST00000312295 FXR2P51116 673 aaKnown RBP eCLIP17.06■□□□□ 0.32
RTP1-201ENST00000312295 MORC3Q14149 939 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 NT5DC1Q5TFE4 455 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 KLHL10Q6JEL2 608 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 SNX29Q8TEQ0 813 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 L3MBTL3Q96JM7 780 aaPredicted RBP17.06■□□□□ 0.32
RTP1-201ENST00000312295 AK8Q96MA6 479 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 CCSER1Q9C0I3 900 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 ELP3Q9H9T3 547 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 CCDC39Q9UFE4 941 aa17.06■□□□□ 0.32
RTP1-201ENST00000312295 PIK3CDO00329 1044 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 SMC2O95347 1197 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 ZNF76P36508 570 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 FMR1Q06787 632 aaKnown RBP eCLIP17.05■□□□□ 0.32
RTP1-201ENST00000312295 ELOA2Q8IYF1 753 aaPredicted RBP17.05■□□□□ 0.32
RTP1-201ENST00000312295 LENG9Q96B70 501 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 CCDC34Q96HJ3 373 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 COL20A1Q9P218 1284 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 PAPPA2Q9BXP8 1791 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 COL11A1P12107 1806 aaPredicted RBP17.05■□□□□ 0.32
RTP1-201ENST00000312295 GLTPD2A6NH11 291 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 VWA5AO00534 786 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 USP11P51784 963 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 NCAPHQ15003 741 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 SPATA20Q8TB22 786 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 OTUD5Q96G74 571 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 PURBQ96QR8 312 aaKnown RBP17.05■□□□□ 0.32
RTP1-201ENST00000312295 PCDHA12Q9UN75 941 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 AFG3L2Q9Y4W6 797 aa17.05■□□□□ 0.32
RTP1-201ENST00000312295 PPP1R12BO60237 982 aaPredicted RBP17.04■□□□□ 0.32
RTP1-201ENST00000312295 FOSP01100 380 aaPredicted RBP17.04■□□□□ 0.32
RTP1-201ENST00000312295 GRB10Q13322 594 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 ECM1Q16610 540 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 NOL9Q5SY16 702 aaKnown RBP17.04■□□□□ 0.32
RTP1-201ENST00000312295 CLEC4DQ8WXI8 215 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 KCNMB3Q9NPA1 279 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 RIPK3Q9Y572 518 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 CSADQ9Y600 493 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 ATP1A3P13637 1013 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 CD44P16070 742 aaKnown RBP17.04■□□□□ 0.32
RTP1-201ENST00000312295 CLCN1P35523 988 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 MAP3K9P80192 1104 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 TREML2Q5T2D2 321 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 KCNK18Q7Z418 384 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 ETNPPLQ8TBG4 499 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 CALML4Q96GE6 196 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 CDK5RAP3Q96JB5 506 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 PNMA5Q96PV4 448 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 ZNF408Q9H9D4 720 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 TMOD4Q9NZQ9 345 aa17.04■□□□□ 0.32
RTP1-201ENST00000312295 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
RTP1-201ENST00000312295 STX17P56962 302 aa17.03■□□□□ 0.32
RTP1-201ENST00000312295 USP50Q70EL3 339 aaPredicted RBP17.03■□□□□ 0.32
RTP1-201ENST00000312295 IL31RAQ8NI17 732 aa17.03■□□□□ 0.32
RTP1-201ENST00000312295 BPIFA3Q9BQP9 254 aa17.03■□□□□ 0.32
RTP1-201ENST00000312295 PYM1Q9BRP8 204 aaKnown RBP17.03■□□□□ 0.32
RTP1-201ENST00000312295 RAB34Q9BZG1 259 aa17.03■□□□□ 0.32
RTP1-201ENST00000312295 TAF1DQ9H5J8 278 aaPredicted RBP17.03■□□□□ 0.32
RTP1-201ENST00000312295 MAPK8IP1Q9UQF2 711 aa17.03■□□□□ 0.32
RTP1-201ENST00000312295 PCNTO95613 3336 aa17.03■□□□□ 0.32
RTP1-201ENST00000312295 MSH4O15457 936 aa17.02■□□□□ 0.32
RTP1-201ENST00000312295 ZNF75DP51815 510 aa17.02■□□□□ 0.32
RTP1-201ENST00000312295 TRAF1Q13077 416 aa17.02■□□□□ 0.32
RTP1-201ENST00000312295 NCAPH2Q6IBW4 605 aa17.02■□□□□ 0.32
RTP1-201ENST00000312295 NSMFQ6X4W1 530 aa17.02■□□□□ 0.32
RTP1-201ENST00000312295 ZNF830Q96NB3 372 aaPredicted RBP17.02■□□□□ 0.32
RTP1-201ENST00000312295 PKD2L1Q9P0L9 805 aa17.02■□□□□ 0.32
RTP1-201ENST00000312295 RLFQ13129 1914 aa17.02■□□□□ 0.32
RTP1-201ENST00000312295 CYP3A7-CYP3A51PA0A087WV96 503 aa17.02■□□□□ 0.32
RTP1-201ENST00000312295 POTECB2RU33 542 aa17.02■□□□□ 0.32
RTP1-201ENST00000312295 ZBED4O75132 1171 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms