RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 RABGAP1Q9Y3P9 1069 aa14.01□□□□□ -0.17
COL3A1-201ENST00000304636 GOLGA8HP0CJ92 632 aa14.01□□□□□ -0.17
COL3A1-201ENST00000304636 CYP27A1Q02318 531 aa14.01□□□□□ -0.17
COL3A1-201ENST00000304636 HADHQ16836 314 aaKnown RBP14.01□□□□□ -0.17
COL3A1-201ENST00000304636 PUS7LQ9H0K6 701 aaKnown RBP14.01□□□□□ -0.17
COL3A1-201ENST00000304636 PTPN22Q9Y2R2 807 aa14.01□□□□□ -0.17
COL3A1-201ENST00000304636 MRFAP1Q9Y605 127 aa14.01□□□□□ -0.17
COL3A1-201ENST00000304636 TMEM232C9JQI7 657 aa14.01□□□□□ -0.17
COL3A1-201ENST00000304636 CHUKO15111 745 aa14.01□□□□□ -0.17
COL3A1-201ENST00000304636 FAM133BQ5BKY9 247 aaKnown RBP14.01□□□□□ -0.17
COL3A1-201ENST00000304636 ANKRD7Q92527 254 aa14.01□□□□□ -0.17
COL3A1-201ENST00000304636 C1orf112Q9NSG2 853 aa14.01□□□□□ -0.17
COL3A1-201ENST00000304636 TACC3Q9Y6A5 838 aa14.01□□□□□ -0.17
COL3A1-201ENST00000304636 GYG1P46976 350 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 ARL6IP4Q66PJ3 421 aaKnown RBP14□□□□□ -0.17
COL3A1-201ENST00000304636 RNF168Q8IYW5 571 aaPredicted RBP14□□□□□ -0.17
COL3A1-201ENST00000304636 KCNF1Q9H3M0 494 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 NFU1Q9UMS0 254 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 FAM170AA1A519 330 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 MYCLP12524 364 aaPredicted RBP14□□□□□ -0.17
COL3A1-201ENST00000304636 GGCXP38435 758 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 PSMD2Q13200 908 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 PTPREP23469 700 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 MESDQ14696 234 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 MIER3Q7Z3K6 550 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 NDST4Q9H3R1 872 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 GREM2Q9H772 168 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 KIAA1024Q9UPX6 916 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 ZNF148Q9UQR1 794 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 ECEL1O95672 775 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 ATF7P17544 494 aaPredicted RBP14□□□□□ -0.17
COL3A1-201ENST00000304636 KCNJ6P48051 423 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 RPS8P62241 208 aaKnown RBP14□□□□□ -0.17
COL3A1-201ENST00000304636 MYL7Q01449 175 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 FAM133AQ8N9E0 248 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14□□□□□ -0.17
COL3A1-201ENST00000304636 TUBB6Q9BUF5 446 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 VCX3AQ9NNX9 186 aa14□□□□□ -0.17
COL3A1-201ENST00000304636 TMEM2Q9UHN6 1383 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 FRMPD2Q68DX3 1309 aaPredicted RBP13.99□□□□□ -0.17
COL3A1-201ENST00000304636 K7ENM7 598 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 BFSP1Q12934 665 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 HSP90AA5PQ58FG0 334 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 PPM1KQ8N3J5 372 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 AIFM3Q96NN9 605 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 FMO2Q99518 471 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 BTG4Q9NY30 223 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 ZSWIM5Q9P217 1185 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 TRPM1Q7Z4N2 1603 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 TAF11Q15544 211 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 CAPN12Q6ZSI9 719 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 OTUD6AQ7L8S5 288 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 PPP1R9AQ9ULJ8 1098 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.99□□□□□ -0.17
COL3A1-201ENST00000304636 PDCLQ13371 301 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 SEPT2Q15019 361 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 C6orf118Q5T5N4 469 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 SAMD9LQ8IVG5 1584 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 RASGRF2O14827 1237 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 NBPF9Q3BBW0 867 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 FBXO41Q8TF61 875 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 GJA10Q969M2 543 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 PLAAQ9Y263 795 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 CD2APQ9Y5K6 639 aa13.99□□□□□ -0.17
COL3A1-201ENST00000304636 SOS2Q07890 1332 aaPredicted RBP13.99□□□□□ -0.17
COL3A1-201ENST00000304636 CCDC188H7C350 402 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 PSMC2P35998 433 aaKnown RBP13.98□□□□□ -0.17
COL3A1-201ENST00000304636 ZKSCAN8Q15776 578 aaPredicted RBP13.98□□□□□ -0.17
COL3A1-201ENST00000304636 ZCCHC17Q9NP64 241 aaKnown RBP13.98□□□□□ -0.17
COL3A1-201ENST00000304636 MYO5CQ9NQX4 1742 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 ATP10DQ9P241 1426 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 POC1B-GALNT4F8VUJ3 575 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 LRRC63Q05C16 580 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 AOC3Q16853 763 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 TEKT1Q969V4 418 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 ZMYND12Q9H0C1 365 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 PLEKHG1Q9ULL1 1385 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 RFC1P35251 1148 aaPredicted RBP13.98□□□□□ -0.17
COL3A1-201ENST00000304636 NSFP46459 744 aaKnown RBP13.98□□□□□ -0.17
COL3A1-201ENST00000304636 MFAP3P55082 362 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 CHRNDQ07001 517 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 ADCY2Q08462 1091 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 ARMCX5Q6P1M9 558 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 SMCR8Q8TEV9 937 aaPredicted RBP13.98□□□□□ -0.17
COL3A1-201ENST00000304636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL3A1-201ENST00000304636 ADGRG1Q9Y653 693 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 MAP3K15Q6ZN16 1313 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 STAM2O75886 525 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 GSDMBQ8TAX9 411 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 MYO1FO00160 1098 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 GIPC1O14908 333 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 CYP2C19P33261 490 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 DR1Q01658 176 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 SCYL3Q8IZE3 742 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 RASGRP4Q8TDF6 673 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 HAUS1Q96CS2 278 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 SCOCQ9UIL1 159 aa13.98□□□□□ -0.17
COL3A1-201ENST00000304636 RFX7Q2KHR2 1363 aa13.97□□□□□ -0.17
COL3A1-201ENST00000304636 LGALS16A8MUM7 142 aa13.97□□□□□ -0.17
COL3A1-201ENST00000304636 hCG_1984214I3L0E3 225 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms