RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 GSTA5Q7RTV2 222 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 CCDC105Q8IYK2 499 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 IGDCC4Q8TDY8 1250 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 RPGRQ92834 1020 aaKnown RBP13.35□□□□□ -0.27
PDGFD-201ENST00000302251 TSKSQ9UJT2 592 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 C5P01031 1676 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 ACTN4O43707 911 aaKnown RBP13.35□□□□□ -0.27
PDGFD-201ENST00000302251 OR52Z1P0C646 297 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 TNFAIP3P21580 790 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 PLTPP55058 493 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 HLFQ16534 295 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 DENND2CQ68D51 928 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 CCDC50Q8IVM0 306 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 MYOCDQ8IZQ8 938 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 CCDC63Q8NA47 563 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 MARCH10Q8NA82 808 aaPredicted RBP13.35□□□□□ -0.27
PDGFD-201ENST00000302251 CTTNBP2NLQ9P2B4 639 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 CEP83Q9Y592 693 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 KLRF2D3W0D1 207 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 LDHCP07864 332 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 EMBQ6PCB8 327 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 CADPS2Q86UW7 1296 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 REXO1Q8N1G1 1221 aaKnown RBP13.35□□□□□ -0.27
PDGFD-201ENST00000302251 TGFBRAP1Q8WUH2 860 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 DMGDHQ9UI17 866 aaKnown RBP13.35□□□□□ -0.27
PDGFD-201ENST00000302251 ATP6V0A2Q9Y487 856 aa13.35□□□□□ -0.27
PDGFD-201ENST00000302251 PALMO75781 387 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 CCNE1P24864 410 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 GUCY2CP25092 1073 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 CTNNA2P26232 953 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 HNRNPH1P31943 449 aaKnown RBP13.34□□□□□ -0.27
PDGFD-201ENST00000302251 RABL6Q3YEC7 729 aaPredicted RBP13.34□□□□□ -0.27
PDGFD-201ENST00000302251 ALS2CLQ60I27 953 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 INTS8Q75QN2 995 aaKnown RBP13.34□□□□□ -0.27
PDGFD-201ENST00000302251 ZNF579Q8NAF0 562 aaKnown RBP13.34□□□□□ -0.27
PDGFD-201ENST00000302251 NLRP3Q96P20 1036 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 CXorf56Q9H5V9 222 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 FLOT1O75955 427 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 LDHBP07195 334 aaKnown RBP13.34□□□□□ -0.27
PDGFD-201ENST00000302251 APBA1Q02410 837 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 HOOK3Q86VS8 718 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 OR2W6PQ8NHA6 318 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 HNRNPLLQ8WVV9 542 aaKnown RBP13.34□□□□□ -0.27
PDGFD-201ENST00000302251 LACRTQ9GZZ8 138 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 DISC1Q9NRI5 854 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 ASIC3Q9UHC3 531 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.34□□□□□ -0.27
PDGFD-201ENST00000302251 CEMIPQ8WUJ3 1361 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 LRRC53A6NM62 1247 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 CHUKO15111 745 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 CHMP2AO43633 222 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 ATP11AP98196 1134 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 NPHP4O75161 1426 aaPredicted RBP13.34□□□□□ -0.27
PDGFD-201ENST00000302251 NCAPD2Q15021 1401 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 FCER1AP12319 257 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 EEF2P13639 858 aaKnown RBP13.34□□□□□ -0.27
PDGFD-201ENST00000302251 DHTKD1Q96HY7 919 aaPredicted RBP13.34□□□□□ -0.27
PDGFD-201ENST00000302251 GGT7Q9UJ14 662 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 HPSEQ9Y251 543 aa13.34□□□□□ -0.27
PDGFD-201ENST00000302251 MROH5Q6ZUA9 1318 aa13.33□□□□□ -0.27
PDGFD-201ENST00000302251 BMP6P22004 513 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 HIBADHP31937 336 aaKnown RBP13.33□□□□□ -0.28
PDGFD-201ENST00000302251 CETN2P41208 172 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 PPP1R2P41236 205 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 ADAM9Q13443 819 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 CAPN12Q6ZSI9 719 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 ARL8AQ96BM9 186 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 INTS13Q9NVM9 706 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 NKIRAS1Q9NYS0 192 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 ZBTB1Q9Y2K1 713 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 PLEKP08567 350 aaPredicted RBP13.33□□□□□ -0.28
PDGFD-201ENST00000302251 SETDB1Q15047 1291 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 KCTD19Q17RG1 926 aaPredicted RBP13.33□□□□□ -0.28
PDGFD-201ENST00000302251 LRCH2Q5VUJ6 765 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 KIRREL3Q8IZU9 778 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 THOC1Q96FV9 657 aaKnown RBP13.33□□□□□ -0.28
PDGFD-201ENST00000302251 CD248Q9HCU0 757 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 INTS9Q9NV88 658 aaKnown RBP13.33□□□□□ -0.28
PDGFD-201ENST00000302251 PTPN22Q9Y2R2 807 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 FRMPD2Q68DX3 1309 aaPredicted RBP13.33□□□□□ -0.28
PDGFD-201ENST00000302251 CARSP49589 748 aaKnown RBP13.33□□□□□ -0.28
PDGFD-201ENST00000302251 TOB1P50616 345 aaPredicted RBP13.33□□□□□ -0.28
PDGFD-201ENST00000302251 SESN3P58005 492 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 TMEM132AQ24JP5 1023 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 KRT25Q7Z3Z0 450 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 SPATS2Q86XZ4 545 aaKnown RBP13.33□□□□□ -0.28
PDGFD-201ENST00000302251 ENAHQ8N8S7 591 aaPredicted RBP13.33□□□□□ -0.28
PDGFD-201ENST00000302251 KIFC2Q96AC6 838 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 DDX47Q9H0S4 455 aaKnown RBP13.33□□□□□ -0.28
PDGFD-201ENST00000302251 MLXIPLQ9NP71 852 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 PKD2L1Q9P0L9 805 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 AMFRQ9UKV5 643 aa13.33□□□□□ -0.28
PDGFD-201ENST00000302251 GSG1L2A8MUP6 293 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 SEMA3EO15041 775 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 EIF3HO15372 352 aaKnown RBP eCLIP13.32□□□□□ -0.28
PDGFD-201ENST00000302251 PRPF3O43395 683 aaKnown RBP13.32□□□□□ -0.28
PDGFD-201ENST00000302251 CHRNDQ07001 517 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 HS2ST1Q7LGA3 356 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 RETREG2Q8NC44 543 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 ERMNQ8TAM6 284 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms