RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 GIMAP8Q8ND71 665 aaPredicted RBP16.21■□□□□ 0.18
COL6A2-201ENST00000300527 LRRC15Q8TF66 581 aa16.21■□□□□ 0.18
COL6A2-201ENST00000300527 TAF4BQ92750 862 aa16.21■□□□□ 0.18
COL6A2-201ENST00000300527 ATP6V1G3Q96LB4 118 aa16.21■□□□□ 0.18
COL6A2-201ENST00000300527 NDST4Q9H3R1 872 aa16.21■□□□□ 0.18
COL6A2-201ENST00000300527 TBC1D7Q9P0N9 293 aa16.21■□□□□ 0.18
COL6A2-201ENST00000300527 MYH10P35580 1976 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 TMCO5BA8MYB1 307 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 PPP1R12BO60237 982 aaPredicted RBP16.2■□□□□ 0.18
COL6A2-201ENST00000300527 GOLGA8HP0CJ92 632 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 GSCP56915 257 aaPredicted RBP16.2■□□□□ 0.18
COL6A2-201ENST00000300527 KCNK3O14649 394 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 RAPGEF1Q13905 1077 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 NEDD9Q14511 834 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 TXNRD1Q16881 649 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 MIIPQ5JXC2 388 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 STAG2Q8N3U4 1231 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 GCOM1H8Y6P7 765 aaPredicted RBP16.2■□□□□ 0.18
COL6A2-201ENST00000300527 OPLAHO14841 1288 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 MYZAPP0CAP1 466 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 CTNNA1P35221 906 aaKnown RBP16.2■□□□□ 0.18
COL6A2-201ENST00000300527 KLHDC7AQ5VTJ3 777 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 CPLX4Q7Z7G2 160 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 RETREG2Q8NC44 543 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 CYFIP2Q96F07 1278 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 DHTKD1Q96HY7 919 aaPredicted RBP16.2■□□□□ 0.18
COL6A2-201ENST00000300527 ZBTB1Q9Y2K1 713 aa16.2■□□□□ 0.18
COL6A2-201ENST00000300527 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
COL6A2-201ENST00000300527 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
COL6A2-201ENST00000300527 RAD51CO43502 376 aa16.19■□□□□ 0.18
COL6A2-201ENST00000300527 CEP104O60308 925 aa16.19■□□□□ 0.18
COL6A2-201ENST00000300527 CCNT1O60563 726 aaKnown RBP16.19■□□□□ 0.18
COL6A2-201ENST00000300527 ATF3P18847 181 aa16.19■□□□□ 0.18
COL6A2-201ENST00000300527 CLNS1AP54105 237 aaKnown RBP16.19■□□□□ 0.18
COL6A2-201ENST00000300527 NAA25Q14CX7 972 aa16.19■□□□□ 0.18
COL6A2-201ENST00000300527 SPRED3Q2MJR0 410 aa16.19■□□□□ 0.18
COL6A2-201ENST00000300527 KDM7AQ6ZMT4 941 aa16.19■□□□□ 0.18
COL6A2-201ENST00000300527 PURBQ96QR8 312 aaKnown RBP16.19■□□□□ 0.18
COL6A2-201ENST00000300527 BAIAP2L1Q9UHR4 511 aa16.19■□□□□ 0.18
COL6A2-201ENST00000300527 FSBPO95073 299 aa16.19■□□□□ 0.18
COL6A2-201ENST00000300527 VWA3BQ502W6 1294 aa16.19■□□□□ 0.18
COL6A2-201ENST00000300527 NOVA2Q9UNW9 492 aaKnown RBP16.19■□□□□ 0.18
COL6A2-201ENST00000300527 PHF20L1A8MW92 1017 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 NEBLO76041 1014 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 RHOBTB3O94955 611 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 CALM1P0DP23 149 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 CALM2P0DP24 149 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 CALM3P0DP25 149 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 ELF1P32519 619 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 IGHMBP2P38935 993 aaKnown RBP16.18■□□□□ 0.18
COL6A2-201ENST00000300527 TXKP42681 527 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 EVA1CP58658 441 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 PPP2R5AQ15172 486 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 TBC1D5Q92609 795 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 ZHX3Q9H4I2 956 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 PLAGL2Q9UPG8 496 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 GBP2P32456 591 aaPredicted RBP16.18■□□□□ 0.18
COL6A2-201ENST00000300527 SNCBQ16143 134 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 QPCTQ16769 361 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 IQCKQ8N0W5 287 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 CDK5RAP3Q96JB5 506 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 ZNF512BQ96KM6 892 aaPredicted RBP16.18■□□□□ 0.18
COL6A2-201ENST00000300527 VCPKMTQ9H867 229 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 TLDC2A0PJX2 215 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 POLR2FP61218 127 aaKnown RBP16.18■□□□□ 0.18
COL6A2-201ENST00000300527 KIAA0753Q2KHM9 967 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 CAVIN3Q969G5 261 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 PLA2G12BQ9BX93 195 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 PACSIN1Q9BY11 444 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 TRIM9Q9C026 710 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 DPH5Q9H2P9 285 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 SEMA6BQ9H3T3 888 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 VEZTQ9HBM0 779 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 STX8Q9UNK0 236 aa16.18■□□□□ 0.18
COL6A2-201ENST00000300527 ATRNO75882 1429 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 MROH5Q6ZUA9 1318 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 EPB41P11171 864 aaKnown RBP16.17■□□□□ 0.18
COL6A2-201ENST00000300527 CALML3P27482 149 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 IFFO1Q0D2I5 559 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 PFKFB3Q16875 520 aaPredicted RBP16.17■□□□□ 0.18
COL6A2-201ENST00000300527 ADAT2Q7Z6V5 191 aaKnown RBP16.17■□□□□ 0.18
COL6A2-201ENST00000300527 DZIP3Q86Y13 1208 aaKnown RBP16.17■□□□□ 0.18
COL6A2-201ENST00000300527 GOPCQ9HD26 462 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 ADAMTS1Q9UHI8 967 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 MYO5AQ9Y4I1 1855 aaKnown RBP16.17■□□□□ 0.18
COL6A2-201ENST00000300527 HGSO14964 777 aaPredicted RBP16.17■□□□□ 0.18
COL6A2-201ENST00000300527 KLRC1P26715 233 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 PPP2R5BQ15173 497 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 RPAINQ86UA6 219 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 SLIT3O75094 1523 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 ERVV-2B6SEH9 535 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 SKAP2O75563 359 aaPredicted RBP16.17■□□□□ 0.18
COL6A2-201ENST00000300527 TRAPPC10P48553 1259 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 PSEN1P49768 467 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 TRIM28Q13263 835 aaKnown RBP16.17■□□□□ 0.18
COL6A2-201ENST00000300527 PNMA8AQ86V59 439 aaPredicted RBP16.17■□□□□ 0.18
COL6A2-201ENST00000300527 NELFCDQ8IXH7 590 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 UHMK1Q8TAS1 419 aaKnown RBP16.17■□□□□ 0.18
COL6A2-201ENST00000300527 DONSONQ9NYP3 566 aa16.17■□□□□ 0.18
COL6A2-201ENST00000300527 FAM107AO95990 144 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms