RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 VGLL2Q8N8G2 317 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 LAMB4A4D0S4 1761 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 SCN11AQ9UI33 1791 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 CCNE1P24864 410 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 CDK17Q00537 523 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 ENOX2Q16206 610 aaKnown RBP14.4□□□□□ -0.1
TVP23A-201ENST00000299866 LPIN2Q92539 896 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 AKAP11Q9UKA4 1901 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 CCDC189A1A4V9 331 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 GCOM1H8Y6P7 765 aaPredicted RBP14.4□□□□□ -0.1
TVP23A-201ENST00000299866 RHOBTB3O94955 611 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 MYZAPP0CAP1 466 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 ASIC1P78348 528 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 NAA25Q14CX7 972 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 KIF6Q6ZMV9 814 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 FAM114A1Q8IWE2 563 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 TBC1D31Q96DN5 1066 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 DHTKD1Q96HY7 919 aaPredicted RBP14.4□□□□□ -0.1
TVP23A-201ENST00000299866 ACTR5Q9H9F9 607 aaPredicted RBP14.4□□□□□ -0.1
TVP23A-201ENST00000299866 ADAMTS7Q9UKP4 1686 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 PALMO75781 387 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 RCAN1P53805 252 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 KCNB1Q14721 858 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 PTPROQ16827 1216 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 PPP4R3AQ6IN85 833 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 TMTC3Q6ZXV5 915 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 ARFGAP2Q8N6H7 521 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 SGSM3Q96HU1 749 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 ERGIC2Q96RQ1 377 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 TMBIM4Q9HC24 238 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 PKD1L3Q7Z443 1732 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 LRP6O75581 1613 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 RAD51CO43502 376 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 GNAT2P19087 354 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 CYP7A1P22680 504 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 GBP2P32456 591 aaPredicted RBP14.39□□□□□ -0.11
TVP23A-201ENST00000299866 EHHADHQ08426 723 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 CACNA2D4Q7Z3S7 1137 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 DDX42Q86XP3 938 aaKnown RBP eCLIP14.39□□□□□ -0.11
TVP23A-201ENST00000299866 CD302Q8IX05 232 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 SEC16BQ96JE7 1060 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 TMEM60Q9H2L4 133 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 LEMD3Q9Y2U8 911 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 TJP1Q07157 1748 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 A0A1W2PQJ5 194 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 BICDL2A1A5D9 508 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 NMT2O60551 498 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 CTSWP56202 376 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 PPP2R5BQ15173 497 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 PUM3Q15397 648 aaKnown RBP14.39□□□□□ -0.11
TVP23A-201ENST00000299866 ANKRD20A8PQ5CZ79 823 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 GPKOWQ92917 476 aaPredicted RBP eCLIP14.39□□□□□ -0.11
TVP23A-201ENST00000299866 NLRC4Q9NPP4 1024 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 RBM28Q9NW13 759 aaKnown RBP14.39□□□□□ -0.11
TVP23A-201ENST00000299866 ABCF2Q9UG63 623 aa14.39□□□□□ -0.11
TVP23A-201ENST00000299866 IRS4O14654 1257 aaPredicted RBP14.38□□□□□ -0.11
TVP23A-201ENST00000299866 SCG2P13521 617 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 TROAPQ12815 778 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 LRCH2Q5VUJ6 765 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 WHAMMQ8TF30 809 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 LRRC15Q8TF66 581 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 BAIAP2L1Q9UHR4 511 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 PHF20L1A8MW92 1017 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 SKAP2O75563 359 aaPredicted RBP14.38□□□□□ -0.11
TVP23A-201ENST00000299866 SCTRP47872 440 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 BCAMP50895 628 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 DRP2Q13474 957 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 HLFQ16534 295 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 CACNA2D3Q8IZS8 1091 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 C4orf32Q8N8J7 132 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 CCDC47Q96A33 483 aaKnown RBP14.38□□□□□ -0.11
TVP23A-201ENST00000299866 SLC39A2Q9NP94 309 aa14.38□□□□□ -0.11
TVP23A-201ENST00000299866 CTNNA1P35221 906 aaKnown RBP14.37□□□□□ -0.11
TVP23A-201ENST00000299866 HSD17B3P37058 310 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 TRAPPC10P48553 1259 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 CDC37Q16543 378 aaPredicted RBP14.37□□□□□ -0.11
TVP23A-201ENST00000299866 ARL6IP4Q66PJ3 421 aaKnown RBP14.37□□□□□ -0.11
TVP23A-201ENST00000299866 CPLX4Q7Z7G2 160 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 TEX11Q8IYF3 940 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 CCDC155Q8N6L0 562 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 UBLCP1Q8WVY7 318 aaPredicted RBP14.37□□□□□ -0.11
TVP23A-201ENST00000299866 DDX17Q92841 729 aaKnown RBP14.37□□□□□ -0.11
TVP23A-201ENST00000299866 PLA2G12BQ9BX93 195 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 TANGO6Q9C0B7 1094 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 NDST4Q9H3R1 872 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 TRMT112Q9UI30 125 aaKnown RBP14.37□□□□□ -0.11
TVP23A-201ENST00000299866 RGPD5Q99666 1765 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 FAM205AQ6ZU69 1335 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 CNTNAP5Q8WYK1 1306 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 SLC5A1P13866 664 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 SATB1Q01826 763 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 VWA3BQ502W6 1294 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 EMC10Q5UCC4 262 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 MREGQ8N565 214 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 NOVA2Q9UNW9 492 aaKnown RBP14.37□□□□□ -0.11
TVP23A-201ENST00000299866 PLCG1P19174 1290 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 ARID5AQ03989 594 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 FIGNQ5HY92 759 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 FAXDC2Q96IV6 333 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 CNOT8Q9UFF9 292 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms