RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-201ENST00000299267 KCNJ18B7U540 433 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 ATP1A3P13637 1013 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 INPP5BP32019 993 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 KCNJ12Q14500 433 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 PTPROQ16827 1216 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 NBPF12Q5TAG4 269 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-201ENST00000299267 CALUO43852 315 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-201ENST00000299267 DNM2P50570 870 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 ADAM9Q13443 819 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 RRAGAQ7L523 313 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 PCIF1Q9H4Z3 704 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 ANKFY1Q9P2R3 1169 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 E9PMD0 336 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 CCNA1P78396 465 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 CCDC122Q5T0U0 273 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 CNGA4Q8IV77 575 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 DESI2Q9BSY9 194 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 MAN1B1Q9UKM7 699 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 MON2Q7Z3U7 1717 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 WDR19Q8NEZ3 1342 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 ENTPD3O75355 529 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 CTNNA2P26232 953 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 CUL4BQ13620 913 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 HLTFQ14527 1009 aaKnown RBP eCLIP11.28□□□□□ -0.6
GABRB3-201ENST00000299267 NBPF11Q86T75 865 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 PAGE5Q96GU1 130 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 COL4A3BPQ9Y5P4 624 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 ADAMTSL3P82987 1691 aa11.28□□□□□ -0.6
GABRB3-201ENST00000299267 LMNB1P20700 586 aa11.27□□□□□ -0.6
GABRB3-201ENST00000299267 HOXA10P31260 410 aaPredicted RBP11.27□□□□□ -0.6
GABRB3-201ENST00000299267 BANK1Q8NDB2 785 aa11.27□□□□□ -0.6
GABRB3-201ENST00000299267 PPP1R9BQ96SB3 815 aa11.27□□□□□ -0.6
GABRB3-201ENST00000299267 FHDC1Q9C0D6 1143 aaPredicted RBP11.27□□□□□ -0.6
GABRB3-201ENST00000299267 HOXC10Q9NYD6 342 aa11.27□□□□□ -0.6
GABRB3-201ENST00000299267 AK9Q5TCS8 1911 aa11.27□□□□□ -0.6
GABRB3-201ENST00000299267 POTEB3A0JP26 581 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 SPDYE2BA6NHP3 402 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 POTECB2RU33 542 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 SPDYE6P0CI01 402 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 GCFC2P16383 781 aaKnown RBP11.27□□□□□ -0.61
GABRB3-201ENST00000299267 POTEBQ6S5H4 581 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 ZNF771Q7L3S4 317 aaPredicted RBP11.27□□□□□ -0.61
GABRB3-201ENST00000299267 CERS5Q8N5B7 392 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 PRR12Q9ULL5 1215 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 PLA2G4BP0C869 781 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 IL1R1P14778 569 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 DESP17661 470 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 CETN2P41208 172 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 PDXDC2PQ6P474 469 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 ADD3Q9UEY8 706 aaKnown RBP11.27□□□□□ -0.61
GABRB3-201ENST00000299267 SPDYE4A6NLX3 237 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 CCDC172P0C7W6 258 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 PROM2Q8N271 834 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 ZDHHC15Q96MV8 337 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 GSDMAQ96QA5 445 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 ACBD3Q9H3P7 528 aa11.27□□□□□ -0.61
GABRB3-201ENST00000299267 ARMCX3Q9UH62 379 aaPredicted RBP11.27□□□□□ -0.61
GABRB3-201ENST00000299267 SLIT3O75094 1523 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 POTEFA5A3E0 1075 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 NEBLO76041 1014 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 RDXP35241 583 aaKnown RBP11.26□□□□□ -0.61
GABRB3-201ENST00000299267 TRPC3Q13507 836 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 SHC4Q6S5L8 630 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 AGBL1Q96MI9 1066 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 FEM1BQ9UK73 627 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 CHD2O14647 1828 aaKnown RBP11.26□□□□□ -0.61
GABRB3-201ENST00000299267 STK36Q9NRP7 1315 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 INO80B-WBP1J3KQ70 363 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 TGFB2P61812 414 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 MTMR1Q13613 665 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 WDR44Q5JSH3 913 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 SPECC1LQ69YQ0 1117 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 MCTP2Q6DN12 878 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 TYW1BQ6NUM6 668 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 TMED8Q6PL24 325 aaPredicted RBP11.26□□□□□ -0.61
GABRB3-201ENST00000299267 APOL6Q9BWW8 343 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 INO80BQ9C086 356 aaPredicted RBP11.26□□□□□ -0.61
GABRB3-201ENST00000299267 DISC1Q9NRI5 854 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 HNRNPDLO14979 420 aaKnown RBP11.26□□□□□ -0.61
GABRB3-201ENST00000299267 KRT86O43790 486 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 PRPF6O94906 941 aaKnown RBP11.26□□□□□ -0.61
GABRB3-201ENST00000299267 XRCC5P13010 732 aaKnown RBP11.26□□□□□ -0.61
GABRB3-201ENST00000299267 LIG4P49917 911 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 GRIN1Q05586 938 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 MTA3Q9BTC8 594 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 JMJD4Q9H9V9 463 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 RGL1Q9NZL6 768 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 EXOC7Q9UPT5 735 aa11.26□□□□□ -0.61
GABRB3-201ENST00000299267 PDE4DIPQ5VU43 2346 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 LAD1O00515 517 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 ERLIN2O94905 339 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 CD19P15391 556 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 NR2F2P24468 414 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 OSTNP61366 133 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms