RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 KRT40Q6A162 431 aa25.89■■□□□ 1.74
LINC01116-201ENST00000295549 TINF2Q9BSI4 451 aa25.89■■□□□ 1.74
LINC01116-201ENST00000295549 FLRT1Q9NZU1 646 aa25.89■■□□□ 1.74
LINC01116-201ENST00000295549 SPDYE3A6NKU9 549 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 MMP1P03956 469 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 BLIDQ8IZY5 108 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 MORC4Q8TE76 937 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 TRIB2Q92519 343 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 IWS1Q96ST2 819 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 PXMP2Q9NR77 195 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 BIN2Q9UBW5 565 aaPredicted RBP25.88■■□□□ 1.73
LINC01116-201ENST00000295549 HTTP42858 3142 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 FRMPD4Q14CM0 1322 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 SYNGAP1Q96PV0 1343 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 B4DLN1 442 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 M0R2N6 131 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 ADAMTS3O15072 1205 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 HSP90AA1P07900 732 aaKnown RBP25.88■■□□□ 1.73
LINC01116-201ENST00000295549 GRK4P32298 578 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 ARHGEF16Q5VV41 709 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 MPHOSPH6Q99547 160 aaKnown RBP25.88■■□□□ 1.73
LINC01116-201ENST00000295549 PCDHA6Q9UN73 950 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 PCDHA8Q9Y5H6 950 aa25.88■■□□□ 1.73
LINC01116-201ENST00000295549 RBBP6Q7Z6E9 1792 aaKnown RBP25.87■■□□□ 1.73
LINC01116-201ENST00000295549 ELNP15502 786 aa25.87■■□□□ 1.73
LINC01116-201ENST00000295549 EDNRBP24530 442 aa25.87■■□□□ 1.73
LINC01116-201ENST00000295549 PDCD2LQ9BRP1 358 aa25.87■■□□□ 1.73
LINC01116-201ENST00000295549 BRMS1Q9HCU9 246 aa25.87■■□□□ 1.73
LINC01116-201ENST00000295549 RPTORQ8N122 1335 aa25.86■■□□□ 1.73
LINC01116-201ENST00000295549 HMGCRP04035 888 aa25.86■■□□□ 1.73
LINC01116-201ENST00000295549 JAKMIP3Q5VZ66 844 aa25.86■■□□□ 1.73
LINC01116-201ENST00000295549 MFSD14CQ5VZR4 134 aa25.86■■□□□ 1.73
LINC01116-201ENST00000295549 ARMCX2Q7L311 632 aa25.86■■□□□ 1.73
LINC01116-201ENST00000295549 FOXD4L1Q9NU39 408 aa25.86■■□□□ 1.73
LINC01116-201ENST00000295549 EIF2AK2P19525 551 aaKnown RBP25.85■■□□□ 1.73
LINC01116-201ENST00000295549 PDCP20941 246 aa25.85■■□□□ 1.73
LINC01116-201ENST00000295549 FOSBP53539 338 aa25.85■■□□□ 1.73
LINC01116-201ENST00000295549 LARP1BQ659C4 914 aaKnown RBP25.85■■□□□ 1.73
LINC01116-201ENST00000295549 EHMT1Q9H9B1 1298 aa25.85■■□□□ 1.73
LINC01116-201ENST00000295549 TSHZ2Q9NRE2 1034 aa25.85■■□□□ 1.73
LINC01116-201ENST00000295549 TMEM260Q9NX78 707 aa25.85■■□□□ 1.73
LINC01116-201ENST00000295549 SNAI1O95863 264 aaPredicted RBP25.84■■□□□ 1.73
LINC01116-201ENST00000295549 NR3C2P08235 984 aa25.84■■□□□ 1.73
LINC01116-201ENST00000295549 KRT2P35908 639 aa25.84■■□□□ 1.73
LINC01116-201ENST00000295549 ANP32AP39687 249 aaKnown RBP25.84■■□□□ 1.73
LINC01116-201ENST00000295549 PGM5Q15124 567 aa25.84■■□□□ 1.73
LINC01116-201ENST00000295549 SAFBQ15424 915 aaKnown RBP eCLIP25.84■■□□□ 1.73
LINC01116-201ENST00000295549 RASGRP4Q8TDF6 673 aa25.84■■□□□ 1.73
LINC01116-201ENST00000295549 ANO3Q9BYT9 981 aa25.84■■□□□ 1.73
LINC01116-201ENST00000295549 NRBP1Q9UHY1 535 aa25.84■■□□□ 1.73
LINC01116-201ENST00000295549 LCTP09848 1927 aa25.84■■□□□ 1.73
LINC01116-201ENST00000295549 CYP2C19P33261 490 aa25.83■■□□□ 1.73
LINC01116-201ENST00000295549 GUCY1B3Q02153 619 aa25.83■■□□□ 1.73
LINC01116-201ENST00000295549 SLC9C1Q4G0N8 1177 aa25.83■■□□□ 1.73
LINC01116-201ENST00000295549 XRRA1Q6P2D8 792 aa25.83■■□□□ 1.73
LINC01116-201ENST00000295549 VSIG10LQ86VR7 867 aa25.83■■□□□ 1.73
LINC01116-201ENST00000295549 DIS3L2Q8IYB7 885 aaKnown RBP25.83■■□□□ 1.73
LINC01116-201ENST00000295549 OXER1Q8TDS5 423 aa25.83■■□□□ 1.73
LINC01116-201ENST00000295549 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.83■■□□□ 1.73
LINC01116-201ENST00000295549 SREBF1P36956 1147 aa25.82■■□□□ 1.72
LINC01116-201ENST00000295549 PDE4DQ08499 809 aa25.82■■□□□ 1.72
LINC01116-201ENST00000295549 STXBP2Q15833 593 aa25.82■■□□□ 1.72
LINC01116-201ENST00000295549 PLXNA1Q9UIW2 1896 aa25.82■■□□□ 1.72
LINC01116-201ENST00000295549 BTBD18B2RXH4 712 aa25.81■■□□□ 1.72
LINC01116-201ENST00000295549 CCND2P30279 289 aa25.81■■□□□ 1.72
LINC01116-201ENST00000295549 MAP3K21Q5TCX8 1036 aa25.81■■□□□ 1.72
LINC01116-201ENST00000295549 PCNX4Q63HM2 1172 aa25.81■■□□□ 1.72
LINC01116-201ENST00000295549 KRT25Q7Z3Z0 450 aa25.81■■□□□ 1.72
LINC01116-201ENST00000295549 IL31RAQ8NI17 732 aa25.81■■□□□ 1.72
LINC01116-201ENST00000295549 CRYGNQ8WXF5 182 aa25.81■■□□□ 1.72
LINC01116-201ENST00000295549 TNFRSF25Q93038 417 aa25.81■■□□□ 1.72
LINC01116-201ENST00000295549 PGBD1Q96JS3 809 aa25.81■■□□□ 1.72
LINC01116-201ENST00000295549 MCOLN1Q9GZU1 580 aa25.81■■□□□ 1.72
LINC01116-201ENST00000295549 FOXP1Q9H334 677 aaPredicted RBP25.81■■□□□ 1.72
LINC01116-201ENST00000295549 ABHD16BQ9H3Z7 469 aa25.81■■□□□ 1.72
LINC01116-201ENST00000295549 CNPY2Q9Y2B0 182 aa25.81■■□□□ 1.72
LINC01116-201ENST00000295549 DDX49Q9Y6V7 483 aaKnown RBP25.81■■□□□ 1.72
LINC01116-201ENST00000295549 H3BQV1 296 aa25.8■■□□□ 1.72
LINC01116-201ENST00000295549 EIF3JO75822 258 aaKnown RBP25.8■■□□□ 1.72
LINC01116-201ENST00000295549 INHAP05111 366 aa25.8■■□□□ 1.72
LINC01116-201ENST00000295549 UBXN2AP68543 259 aa25.8■■□□□ 1.72
LINC01116-201ENST00000295549 CACNB2Q08289 660 aaPredicted RBP25.8■■□□□ 1.72
LINC01116-201ENST00000295549 TRIM32Q13049 653 aa25.8■■□□□ 1.72
LINC01116-201ENST00000295549 NR5A1Q13285 461 aa25.8■■□□□ 1.72
LINC01116-201ENST00000295549 IFFO2Q5TF58 517 aa25.8■■□□□ 1.72
LINC01116-201ENST00000295549 SH3TC2Q8TF17 1288 aa25.8■■□□□ 1.72
LINC01116-201ENST00000295549 KATNBL1Q9H079 304 aa25.8■■□□□ 1.72
LINC01116-201ENST00000295549 RBM19Q9Y4C8 960 aaKnown RBP25.8■■□□□ 1.72
LINC01116-201ENST00000295549 STAM2O75886 525 aa25.8■■□□□ 1.72
LINC01116-201ENST00000295549 PRKAR2AP13861 404 aaKnown RBP25.8■■□□□ 1.72
LINC01116-201ENST00000295549 SYT1P21579 422 aa25.8■■□□□ 1.72
LINC01116-201ENST00000295549 SPRYD3Q8NCJ5 442 aa25.8■■□□□ 1.72
LINC01116-201ENST00000295549 CCDC194A0A1B0GVG4 234 aa25.79■■□□□ 1.72
LINC01116-201ENST00000295549 CYP3A4P08684 503 aa25.79■■□□□ 1.72
LINC01116-201ENST00000295549 MYCLP12524 364 aaPredicted RBP25.79■■□□□ 1.72
LINC01116-201ENST00000295549 PDIA4P13667 645 aaKnown RBP25.79■■□□□ 1.72
LINC01116-201ENST00000295549 U2AF2P26368 475 aaKnown RBP eCLIP25.79■■□□□ 1.72
LINC01116-201ENST00000295549 MRPS9P82933 396 aaKnown RBP25.79■■□□□ 1.72
LINC01116-201ENST00000295549 ARHGAP4P98171 946 aa25.79■■□□□ 1.72
LINC01116-201ENST00000295549 ACVR2BQ13705 512 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms