RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 TEX2Q8IWB9 1127 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 JDP2Q8WYK2 163 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 VPS16Q9H269 839 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 TAB2Q9NYJ8 693 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 TMOD2Q9NZR1 351 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 DDX25Q9UHL0 483 aaKnown RBP16.54■□□□□ 0.24
TTC9C-201ENST00000294161 DICER1Q9UPY3 1922 aaKnown RBP16.54■□□□□ 0.24
TTC9C-201ENST00000294161 EEF2P13639 858 aaKnown RBP16.54■□□□□ 0.24
TTC9C-201ENST00000294161 UBXN1Q04323 297 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 CXCL9Q07325 125 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 NCBP1Q09161 790 aaKnown RBP16.54■□□□□ 0.24
TTC9C-201ENST00000294161 ABCB5Q2M3G0 1257 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 TSR1Q2NL82 804 aaKnown RBP16.54■□□□□ 0.24
TTC9C-201ENST00000294161 TTBK2Q6IQ55 1244 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 KCTD1Q719H9 257 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 CLEC10AQ8IUN9 316 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 GMCL1P1Q8NEA9 526 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 P2RX5Q93086 422 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 FAM198AQ9UFP1 575 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 PSME4Q14997 1843 aa16.54■□□□□ 0.24
TTC9C-201ENST00000294161 MYH4Q9Y623 1939 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 KDM3AQ9Y4C1 1321 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 SHTN1A0MZ66 631 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 LGALS16A8MUM7 142 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 FECHP22830 423 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 CASQ1P31415 396 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 SLC16A2P36021 539 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 DNM2P50570 870 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 USP11P51784 963 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 ICA1Q05084 483 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 PSMD2Q13200 908 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 AP3B2Q13367 1082 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 PTPN21Q16825 1174 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 CREBRFQ8IUR6 639 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 LARP4BQ92615 738 aaKnown RBP16.53■□□□□ 0.24
TTC9C-201ENST00000294161 IQCDQ96DY2 449 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 GMCL1Q96IK5 515 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 NUP88Q99567 741 aaPredicted RBP16.53■□□□□ 0.24
TTC9C-201ENST00000294161 MMTAG2Q9BU76 263 aaKnown RBP16.53■□□□□ 0.24
TTC9C-201ENST00000294161 NT5C3AQ9H0P0 336 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 MAPK8IP1Q9UQF2 711 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 STK24Q9Y6E0 443 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 ATRNL1Q5VV63 1379 aa16.53■□□□□ 0.24
TTC9C-201ENST00000294161 DDTLA6NHG4 134 aaPredicted RBP16.52■□□□□ 0.24
TTC9C-201ENST00000294161 TDP2O95551 362 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 CASP14P31944 242 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 RBM26Q5T8P6 1007 aaKnown RBP16.52■□□□□ 0.24
TTC9C-201ENST00000294161 TTI2Q6NXR4 508 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 TRIM65Q6PJ69 517 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 MOXD1Q6UVY6 613 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 CYP26C1Q6V0L0 522 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 UNC13DQ70J99 1090 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 ZFPM1Q8IX07 1006 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 CSGALNACT2Q8N6G5 542 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 SNX29Q8TEQ0 813 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 CPLX3Q8WVH0 158 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 NUP58Q9BVL2 599 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 CCDC94Q9BW85 323 aaPredicted RBP16.52■□□□□ 0.24
TTC9C-201ENST00000294161 BMP2KQ9NSY1 1161 aaPredicted RBP16.52■□□□□ 0.24
TTC9C-201ENST00000294161 ZNF215Q9UL58 517 aaPredicted RBP16.52■□□□□ 0.24
TTC9C-201ENST00000294161 GJA3Q9Y6H8 435 aa16.52■□□□□ 0.24
TTC9C-201ENST00000294161 RAD21O60216 631 aa16.52■□□□□ 0.23
TTC9C-201ENST00000294161 PPP1R11O60927 126 aaPredicted RBP16.52■□□□□ 0.23
TTC9C-201ENST00000294161 GYPCP04921 128 aa16.52■□□□□ 0.23
TTC9C-201ENST00000294161 GNG11P61952 73 aa16.52■□□□□ 0.23
TTC9C-201ENST00000294161 GRB10Q13322 594 aa16.52■□□□□ 0.23
TTC9C-201ENST00000294161 QRICH1Q2TAL8 776 aa16.52■□□□□ 0.23
TTC9C-201ENST00000294161 MB21D1Q8N884 522 aa16.52■□□□□ 0.23
TTC9C-201ENST00000294161 RETREG2Q8NC44 543 aa16.52■□□□□ 0.23
TTC9C-201ENST00000294161 RAD54LQ92698 747 aa16.52■□□□□ 0.23
TTC9C-201ENST00000294161 AMNQ9BXJ7 453 aa16.52■□□□□ 0.23
TTC9C-201ENST00000294161 DNAJC18Q9H819 358 aa16.52■□□□□ 0.23
TTC9C-201ENST00000294161 HERC5Q9UII4 1024 aaKnown RBP16.52■□□□□ 0.23
TTC9C-201ENST00000294161 PCDHA1Q9Y5I3 950 aa16.52■□□□□ 0.23
TTC9C-201ENST00000294161 PCDHAC2Q9Y5I4 1007 aa16.52■□□□□ 0.23
TTC9C-201ENST00000294161 SLC37A4O43826 429 aa16.51■□□□□ 0.23
TTC9C-201ENST00000294161 FOSP01100 380 aaPredicted RBP16.51■□□□□ 0.23
TTC9C-201ENST00000294161 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
TTC9C-201ENST00000294161 UBE2SQ16763 222 aa16.51■□□□□ 0.23
TTC9C-201ENST00000294161 TOGARAM2Q6ZUX3 1019 aa16.51■□□□□ 0.23
TTC9C-201ENST00000294161 VPS33BQ9H267 617 aa16.51■□□□□ 0.23
TTC9C-201ENST00000294161 HDAC9Q9UKV0 1011 aa16.51■□□□□ 0.23
TTC9C-201ENST00000294161 PCDHA12Q9UN75 941 aa16.51■□□□□ 0.23
TTC9C-201ENST00000294161 FZD9O00144 591 aa16.5■□□□□ 0.23
TTC9C-201ENST00000294161 GRIN3BO60391 1043 aa16.5■□□□□ 0.23
TTC9C-201ENST00000294161 CACNB3P54284 484 aa16.5■□□□□ 0.23
TTC9C-201ENST00000294161 TUBB2AQ13885 445 aa16.5■□□□□ 0.23
TTC9C-201ENST00000294161 TMEM119Q4V9L6 283 aa16.5■□□□□ 0.23
TTC9C-201ENST00000294161 FOXR2Q6PJQ5 311 aa16.5■□□□□ 0.23
TTC9C-201ENST00000294161 SLFN12Q8IYM2 578 aa16.5■□□□□ 0.23
TTC9C-201ENST00000294161 MNS1Q8NEH6 495 aa16.5■□□□□ 0.23
TTC9C-201ENST00000294161 TUBB2BQ9BVA1 445 aa16.5■□□□□ 0.23
TTC9C-201ENST00000294161 ADGRG1Q9Y653 693 aa16.5■□□□□ 0.23
TTC9C-201ENST00000294161 KIF5CO60282 957 aa16.49■□□□□ 0.23
TTC9C-201ENST00000294161 URI1O94763 535 aaPredicted RBP16.49■□□□□ 0.23
TTC9C-201ENST00000294161 CIAPIN1Q6FI81 312 aa16.49■□□□□ 0.23
TTC9C-201ENST00000294161 SH3BP5LQ7L8J4 393 aa16.49■□□□□ 0.23
TTC9C-201ENST00000294161 IRF2BP1Q8IU81 584 aa16.49■□□□□ 0.23
TTC9C-201ENST00000294161 PNMA5Q96PV4 448 aa16.49■□□□□ 0.23
TTC9C-201ENST00000294161 ABHD10Q9NUJ1 306 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms