RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 CENPPQ6IPU0 288 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 FOXR1Q6PIV2 292 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 C2CD5Q86YS7 1000 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 RIN2Q8WYP3 895 aaPredicted RBP18.76■□□□□ 0.59
CHRNE-201ENST00000293780 SECISBP2LQ93073 1101 aaKnown RBP18.76■□□□□ 0.59
CHRNE-201ENST00000293780 CALML4Q96GE6 196 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 ZFP91Q96JP5 570 aaPredicted RBP18.76■□□□□ 0.59
CHRNE-201ENST00000293780 DRC1Q96MC2 740 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 PNMA5Q96PV4 448 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 MLXIPQ9HAP2 919 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 ATP2B2Q01814 1243 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 CCDC96Q2M329 555 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 C16orf86Q6ZW13 317 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 SV2BQ7L1I2 683 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 NEDD1Q8NHV4 660 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 ARHGEF1Q92888 912 aaKnown RBP18.75■□□□□ 0.59
CHRNE-201ENST00000293780 SEC63Q9UGP8 760 aaKnown RBP18.75■□□□□ 0.59
CHRNE-201ENST00000293780 HPCAL4Q9UM19 191 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 CAPN6Q9Y6Q1 641 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 NAV1Q8NEY1 1877 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 FRMPD2Q68DX3 1309 aaPredicted RBP18.75■□□□□ 0.59
CHRNE-201ENST00000293780 A0A1W2PQJ5 194 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 EDIL3O43854 480 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 CKAP4Q07065 602 aaKnown RBP18.75■□□□□ 0.59
CHRNE-201ENST00000293780 MAPK8IP2Q13387 824 aaPredicted RBP18.75■□□□□ 0.59
CHRNE-201ENST00000293780 VWA3BQ502W6 1294 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 COA7Q96BR5 231 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 NUDT12Q9BQG2 462 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 FAM204AQ9H8W3 233 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 SIK3Q9Y2K2 1263 aa18.75■□□□□ 0.59
CHRNE-201ENST00000293780 SLC37A4O43826 429 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 NT5C2P49902 561 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 MRPS25P82663 173 aaKnown RBP18.74■□□□□ 0.59
CHRNE-201ENST00000293780 CDK17Q00537 523 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 FIGNQ5HY92 759 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 TEX11Q8IYF3 940 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 REXO1Q8N1G1 1221 aaKnown RBP18.74■□□□□ 0.59
CHRNE-201ENST00000293780 GLIS3Q8NEA6 775 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 TSPYL1Q9H0U9 437 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 NDST4Q9H3R1 872 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 LEMD3Q9Y2U8 911 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 SBF2Q86WG5 1849 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 ZC3H4Q9UPT8 1303 aaKnown RBP18.74■□□□□ 0.59
CHRNE-201ENST00000293780 TARSL2A2RTX5 802 aaKnown RBP18.74■□□□□ 0.59
CHRNE-201ENST00000293780 RNF40O75150 1001 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 MOCS3O95396 460 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 TDP2O95551 362 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 LDHCP07864 332 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 SPA17Q15506 151 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.74■□□□□ 0.59
CHRNE-201ENST00000293780 MTMR9Q96QG7 549 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 MMRN2Q9H8L6 949 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 FEZ2Q9UHY8 353 aaPredicted RBP18.74■□□□□ 0.59
CHRNE-201ENST00000293780 PLAGL2Q9UPG8 496 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 PCDHA13Q9Y5I0 950 aa18.74■□□□□ 0.59
CHRNE-201ENST00000293780 MYH10P35580 1976 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 POTEMA6NI47 508 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 EIF4A3P38919 411 aaKnown RBP18.73■□□□□ 0.59
CHRNE-201ENST00000293780 GRAPQ13588 217 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 LRRC41Q15345 812 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 EZH2Q15910 746 aaKnown RBP18.73■□□□□ 0.59
CHRNE-201ENST00000293780 CALCRLQ16602 461 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 CCNI2Q6ZMN8 369 aaPredicted RBP18.73■□□□□ 0.59
CHRNE-201ENST00000293780 LEKR1Q6ZMV7 388 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 ZNF804AQ7Z570 1209 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 CREG2Q8IUH2 290 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 GRAPLQ8TC17 118 aaPredicted RBP18.73■□□□□ 0.59
CHRNE-201ENST00000293780 COG1Q8WTW3 980 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 RPGRIP1Q96KN7 1286 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 ACBD3Q9H3P7 528 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 MED4Q9NPJ6 270 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 TNRC6CQ9HCJ0 1690 aaKnown RBP18.73■□□□□ 0.59
CHRNE-201ENST00000293780 ANO9A1A5B4 782 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 CCDC155Q8N6L0 562 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 IFIH1Q9BYX4 1025 aaKnown RBP18.73■□□□□ 0.59
CHRNE-201ENST00000293780 VIPAS39Q9H9C1 493 aa18.73■□□□□ 0.59
CHRNE-201ENST00000293780 RGL2O15211 777 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 KIF11P52732 1056 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 COBLL1Q53SF7 1204 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 RC3H1Q5TC82 1133 aaKnown RBP18.72■□□□□ 0.59
CHRNE-201ENST00000293780 UNC13DQ70J99 1090 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 KCNK18Q7Z418 384 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 HDAC7Q8WUI4 952 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 LARP4BQ92615 738 aaKnown RBP18.72■□□□□ 0.59
CHRNE-201ENST00000293780 PSMB7Q99436 277 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 ZNF287Q9HBT7 754 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 SMARCAL1Q9NZC9 954 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 LRRC53A6NM62 1247 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 PRPF6O94906 941 aaKnown RBP18.72■□□□□ 0.59
CHRNE-201ENST00000293780 HNRNPH3P31942 346 aaKnown RBP18.72■□□□□ 0.59
CHRNE-201ENST00000293780 PPP1R2P41236 205 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 AARSP49588 968 aaKnown RBP eCLIP18.72■□□□□ 0.59
CHRNE-201ENST00000293780 GPSM2P81274 684 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 MAP9Q49MG5 647 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 RRAGAQ7L523 313 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 GJA10Q969M2 543 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 TRIM34Q9BYJ4 488 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 SH2D4AQ9H788 454 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 SNX12Q9UMY4 172 aa18.72■□□□□ 0.59
CHRNE-201ENST00000293780 RTCBQ9Y3I0 505 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms