RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 POTEDQ86YR6 584 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 ZNF384Q8TF68 577 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 DYNLL2Q96FJ2 89 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 TSGA10Q9BZW7 698 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 MEFVO15553 781 aaPredicted RBP14.3□□□□□ -0.12
COL8A1-202ENST00000273342 TCP1P17987 556 aaKnown RBP14.3□□□□□ -0.12
COL8A1-202ENST00000273342 PYM1Q9BRP8 204 aaKnown RBP14.3□□□□□ -0.12
COL8A1-202ENST00000273342 CXorf56Q9H5V9 222 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 TCP11L1Q9NUJ3 509 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 KBTBD4Q9NVX7 518 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 STX8Q9UNK0 236 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 PLAGL2Q9UPG8 496 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 USP17L3A6NCW0 530 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 USP17L4A6NCW7 530 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 PALMO75781 387 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 CYP19A1P11511 503 aaPredicted RBP14.29□□□□□ -0.12
COL8A1-202ENST00000273342 TXKP42681 527 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 RCAN1P53805 252 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 SF3B2Q13435 895 aaKnown RBP14.29□□□□□ -0.12
COL8A1-202ENST00000273342 KLHDC7AQ5VTJ3 777 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 ARL6IP4Q66PJ3 421 aaKnown RBP14.29□□□□□ -0.12
COL8A1-202ENST00000273342 EMBQ6PCB8 327 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 USP17L1Q7RTZ2 530 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 KIAA0895Q8NCT3 520 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 TBC1D7Q9P0N9 293 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 PCDHA4Q9UN74 947 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 USP17L8P0C7I0 530 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 TMOD1P28289 359 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 TRAPPC10P48553 1259 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 SETQ01105 290 aaPredicted RBP14.29□□□□□ -0.12
COL8A1-202ENST00000273342 TFAP4Q01664 338 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 EP400NLQ6ZTU2 488 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 CEP57Q86XR8 500 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 ZNF473Q8WTR7 871 aaKnown RBP14.29□□□□□ -0.12
COL8A1-202ENST00000273342 DHTKD1Q96HY7 919 aaPredicted RBP14.29□□□□□ -0.12
COL8A1-202ENST00000273342 CABS1Q96KC9 395 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 CCT8L2Q96SF2 557 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 PCDHA6Q9UN73 950 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 PCDHA8Q9Y5H6 950 aa14.29□□□□□ -0.12
COL8A1-202ENST00000273342 DDAH1O94760 285 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 KLRK1P26718 216 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 B4GALNT4Q76KP1 1039 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 IFT20Q8IY31 132 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 CASKIN2Q8WXE0 1202 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 CCDC47Q96A33 483 aaKnown RBP14.28□□□□□ -0.12
COL8A1-202ENST00000273342 CEP89Q96ST8 783 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 MCM9Q9NXL9 1143 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 TFCP2L1Q9NZI6 479 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 BICDL2A1A5D9 508 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 KCNB1Q14721 858 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 CFAP221Q4G0U5 840 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 VWA3BQ502W6 1294 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 ODF2Q5BJF6 829 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 ALS2CLQ60I27 953 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 FAM212AQ96EL1 285 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 NOX5Q96PH1 765 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 PACSIN1Q9BY11 444 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 PLAAQ9Y263 795 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 RETREG2Q8NC44 543 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 PNMA1Q8ND90 353 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 GJA10Q969M2 543 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 SLAIN2Q9P270 581 aa14.28□□□□□ -0.12
COL8A1-202ENST00000273342 CALML3P27482 149 aa14.27□□□□□ -0.12
COL8A1-202ENST00000273342 NLRP14Q86W24 1093 aa14.27□□□□□ -0.12
COL8A1-202ENST00000273342 FAM114A1Q8IWE2 563 aa14.27□□□□□ -0.12
COL8A1-202ENST00000273342 SLC44A5Q8NCS7 719 aa14.27□□□□□ -0.12
COL8A1-202ENST00000273342 ANAPC4Q9UJX5 808 aa14.27□□□□□ -0.12
COL8A1-202ENST00000273342 BAZ2AQ9UIF9 1905 aaKnown RBP14.27□□□□□ -0.12
COL8A1-202ENST00000273342 CHD4Q14839 1912 aa14.27□□□□□ -0.13
COL8A1-202ENST00000273342 PPP1R37O75864 691 aa14.27□□□□□ -0.13
COL8A1-202ENST00000273342 KLRC1P26715 233 aa14.27□□□□□ -0.13
COL8A1-202ENST00000273342 PRDX5P30044 214 aa14.27□□□□□ -0.13
COL8A1-202ENST00000273342 FNTAP49354 379 aa14.27□□□□□ -0.13
COL8A1-202ENST00000273342 SPRED3Q2MJR0 410 aa14.27□□□□□ -0.13
COL8A1-202ENST00000273342 IQCKQ8N0W5 287 aa14.27□□□□□ -0.13
COL8A1-202ENST00000273342 CNPY4Q8N129 248 aa14.27□□□□□ -0.13
COL8A1-202ENST00000273342 PRPF38AQ8NAV1 312 aaKnown RBP14.27□□□□□ -0.13
COL8A1-202ENST00000273342 PIK3R5Q8WYR1 880 aa14.27□□□□□ -0.13
COL8A1-202ENST00000273342 ERGIC2Q96RQ1 377 aa14.27□□□□□ -0.13
COL8A1-202ENST00000273342 AP1M1Q9BXS5 423 aa14.27□□□□□ -0.13
COL8A1-202ENST00000273342 EPN3Q9H201 632 aa14.27□□□□□ -0.13
COL8A1-202ENST00000273342 LMTK3Q96Q04 1460 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 USP8P40818 1118 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 NKX1-1Q15270 411 aaPredicted RBP14.26□□□□□ -0.13
COL8A1-202ENST00000273342 PTGISQ16647 500 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 SLC35G1Q2M3R5 365 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 RCSD1Q6JBY9 416 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 MYCBPAPQ8TBZ2 947 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 TBC1D5Q92609 795 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 MTA3Q9BTC8 594 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 DCP1AQ9NPI6 582 aaPredicted RBP14.26□□□□□ -0.13
COL8A1-202ENST00000273342 ADAMTS1Q9UHI8 967 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 NIP7Q9Y221 180 aaKnown RBP eCLIP14.26□□□□□ -0.13
COL8A1-202ENST00000273342 SIK3Q9Y2K2 1263 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 FRMD3A2A2Y4 597 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 RAD51CO43502 376 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 POLR2FP61218 127 aaKnown RBP14.26□□□□□ -0.13
COL8A1-202ENST00000273342 SKOR1P84550 965 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 CCDC152Q4G0S7 254 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 SWT1Q5T5J6 900 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms