RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 DONSONQ9NYP3 566 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 ACEP12821 1306 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 LAD1O00515 517 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 USH1GQ495M9 461 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 TEDDM1Q5T9Z0 273 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 ARHGEF16Q5VV41 709 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 FAM178BQ8IXR5 827 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 RNF169Q8NCN4 708 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 CUEDC2Q9H467 287 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 PCDHA12Q9UN75 941 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 ZNF711Q9Y462 761 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 LAMC3Q9Y6N6 1575 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 MYH11P35749 1972 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 PAMP19021 973 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 CYP2J2P51589 502 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 CCDC15Q0P6D6 951 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 PNOCQ13519 176 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 MTBPQ96DY7 904 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 BABAM1Q9NWV8 329 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 TLK1Q9UKI8 766 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 DDIT3P35638 169 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 GRM1Q13255 1194 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 CAPN12Q6ZSI9 719 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 EXOC8Q8IYI6 725 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 NR1H4Q96RI1 486 aaPredicted RBP13.09□□□□□ -0.31
SRRM4-201ENST00000267260 ZNF212Q9UDV6 495 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 CDC37L1Q7L3B6 337 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 COG4Q9H9E3 785 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 KIF17Q9P2E2 1029 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 XPAP23025 273 aaPredicted RBP13.08□□□□□ -0.31
SRRM4-201ENST00000267260 PARP10Q53GL7 1025 aa13.08□□□□□ -0.31
SRRM4-201ENST00000267260 DISP3Q9P2K9 1392 aa13.08□□□□□ -0.31
SRRM4-201ENST00000267260 RMDN2Q96LZ7 410 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 UIMC1Q96RL1 719 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 PA2G4Q9UQ80 394 aaKnown RBP13.08□□□□□ -0.32
SRRM4-201ENST00000267260 EPN1Q9Y6I3 576 aaPredicted RBP13.08□□□□□ -0.32
SRRM4-201ENST00000267260 RIMS2Q9UQ26 1411 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 MYO5CQ9NQX4 1742 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 MED7O43513 233 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 FAM102BQ5T8I3 360 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 GSDMAQ96QA5 445 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 STX18Q9P2W9 335 aaKnown RBP13.08□□□□□ -0.32
SRRM4-201ENST00000267260 CPSF3Q9UKF6 684 aaKnown RBP13.08□□□□□ -0.32
SRRM4-201ENST00000267260 TSC22D4Q9Y3Q8 395 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 AP2B1P63010 937 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 KRT39Q6A163 491 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 CRLF3Q8IUI8 442 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
SRRM4-201ENST00000267260 ATP8A2Q9NTI2 1148 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 CHUKO15111 745 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 BZW1Q7L1Q6 419 aaKnown RBP13.08□□□□□ -0.32
SRRM4-201ENST00000267260 ZNF215Q9UL58 517 aaPredicted RBP13.08□□□□□ -0.32
SRRM4-201ENST00000267260 COL4A3BPQ9Y5P4 624 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 ARHGEF37A1IGU5 675 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 MYO1FO00160 1098 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 ICA1LQ8NDH6 482 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 NAF1Q96HR8 494 aaKnown RBP13.08□□□□□ -0.32
SRRM4-201ENST00000267260 FAM96AQ9H5X1 160 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 ATP6V0A4Q9HBG4 840 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 SLC4A7Q9Y6M7 1214 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 POLR3AO14802 1390 aaPredicted RBP13.08□□□□□ -0.32
SRRM4-201ENST00000267260 ATP8B3O60423 1300 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 STAT2P52630 851 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 IRX1P78414 480 aaPredicted RBP13.08□□□□□ -0.32
SRRM4-201ENST00000267260 CEP55Q53EZ4 464 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 STX19Q8N4C7 294 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 MAGOHBQ96A72 148 aaKnown RBP13.08□□□□□ -0.32
SRRM4-201ENST00000267260 SLC24A3Q9HC58 644 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 ZBTB40Q9NUA8 1239 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 IRAK4Q9NWZ3 460 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 CHCHD3Q9NX63 227 aaKnown RBP13.08□□□□□ -0.32
SRRM4-201ENST00000267260 SESN1Q9Y6P5 492 aa13.08□□□□□ -0.32
SRRM4-201ENST00000267260 HMGXB3Q12766 1538 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 TBC1D22AQ8WUA7 517 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 STMN3Q9NZ72 180 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 STOML1Q9UBI4 398 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 ATP11BQ9Y2G3 1177 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 PIK3C2GO75747 1445 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 IQANK1A0A1B0GTG1 560 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 PRR23D1E9PI22 279 aaPredicted RBP13.07□□□□□ -0.32
SRRM4-201ENST00000267260 PRR23D2P0DMB1 279 aaPredicted RBP13.07□□□□□ -0.32
SRRM4-201ENST00000267260 PCP11498 1178 aaKnown RBP13.07□□□□□ -0.32
SRRM4-201ENST00000267260 NCF2P19878 526 aaPredicted RBP13.07□□□□□ -0.32
SRRM4-201ENST00000267260 IGBP1P78318 339 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 MAML1Q92585 1016 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 PGBD1Q96JS3 809 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 FAM193BQ96PV7 902 aaPredicted RBP13.07□□□□□ -0.32
SRRM4-201ENST00000267260 PRXQ9BXM0 1461 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 ABCA5Q8WWZ7 1642 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 K7ENM7 598 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 HIBADHP31937 336 aaKnown RBP13.07□□□□□ -0.32
SRRM4-201ENST00000267260 ADCY2Q08462 1091 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 CUL1Q13616 776 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 TBCCQ15814 346 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 DEPDC1BQ8WUY9 529 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 PIK3R5Q8WYR1 880 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 ANO3Q9BYT9 981 aa13.07□□□□□ -0.32
SRRM4-201ENST00000267260 MRPL47Q9HD33 250 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms