RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 SNHG28P0DPA3 235 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 CCNE1P24864 410 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 ZNF543Q08ER8 600 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 GRB10Q13322 594 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 ORC2Q13416 577 aaPredicted RBP14.43□□□□□ -0.1
CPSF6-201ENST00000266679 ANKRD40Q6AI12 368 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 ADGRF4Q8IZF3 695 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 NOC3LQ8WTT2 800 aaKnown RBP14.43□□□□□ -0.1
CPSF6-201ENST00000266679 C7orf43Q8WVR3 580 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 MTMR9Q96QG7 549 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 ARGLU1Q9NWB6 273 aaPredicted RBP14.43□□□□□ -0.1
CPSF6-201ENST00000266679 LRWD1Q9UFC0 647 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 SUGT1Q9Y2Z0 365 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 G3V3G9 751 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 PPP1R11O60927 126 aaPredicted RBP14.42□□□□□ -0.1
CPSF6-201ENST00000266679 ABL1P00519 1130 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 SLC16A2P36021 539 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 HTRA3P83110 453 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 SEMA3FQ13275 785 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 MCM6Q14566 821 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 TMEM266Q2M3C6 531 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 DCAF8Q5TAQ9 597 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 CDC42EP5Q6NZY7 148 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 SLC35F6Q8N357 371 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 ZNF507Q8TCN5 953 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 CDK5RAP3Q96JB5 506 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 PNMA5Q96PV4 448 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 CHP1Q99653 195 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 JMJD4Q9H9V9 463 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 SWAP70Q9UH65 585 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 SIPA1L1O43166 1804 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 BICDL2A1A5D9 508 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 POTEMA6NI47 508 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 AMPD3Q01432 767 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 DMTNQ08495 405 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 CNOT6LQ96LI5 555 aaKnown RBP14.42□□□□□ -0.1
CPSF6-201ENST00000266679 TUBGCP2Q9BSJ2 902 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 ZSWIM4Q9H7M6 989 aa14.42□□□□□ -0.1
CPSF6-201ENST00000266679 ZNF277Q9NRM2 450 aaPredicted RBP14.42□□□□□ -0.1
CPSF6-201ENST00000266679 A0A1W2PQC6 194 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 GLTPD2A6NH11 291 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 EDIL3O43854 480 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 HLA-DOAP06340 250 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 MTIF2P46199 727 aaKnown RBP14.41□□□□□ -0.1
CPSF6-201ENST00000266679 KCTD1Q719H9 257 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 SV2BQ7L1I2 683 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 KIAA0895Q8NCT3 520 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 GOLGA1Q92805 767 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 SLC39A2Q9NP94 309 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 BLOC1S4Q9NUP1 217 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 PNMA6FA0A0J9YX94 578 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 MYMKA6NI61 221 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 USP17L10C9JJH3 530 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 RAD21O60216 631 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 SEC31AO94979 1220 aaKnown RBP14.41□□□□□ -0.1
CPSF6-201ENST00000266679 ARHGAP25P42331 645 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 KLK7P49862 253 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 DNM2P50570 870 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 FXR2P51116 673 aaKnown RBP eCLIP14.41□□□□□ -0.1
CPSF6-201ENST00000266679 NFIAQ12857 509 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 KIF4BQ2VIQ3 1234 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 CNNM4Q6P4Q7 775 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 TMCO3Q6UWJ1 677 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 RSRC2Q7L4I2 434 aaKnown RBP14.41□□□□□ -0.1
CPSF6-201ENST00000266679 SNX29Q8TEQ0 813 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 TEKT1Q969V4 418 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 RIC8AQ9NPQ8 531 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 FAM53CQ9NYF3 392 aa14.41□□□□□ -0.1
CPSF6-201ENST00000266679 LUC7L2Q9Y383 392 aaKnown RBP14.41□□□□□ -0.1
CPSF6-201ENST00000266679 ZC3H4Q9UPT8 1303 aaKnown RBP14.4□□□□□ -0.1
CPSF6-201ENST00000266679 BMS1Q14692 1282 aaKnown RBP14.4□□□□□ -0.1
CPSF6-201ENST00000266679 PPP1R18Q6NYC8 613 aa14.4□□□□□ -0.1
CPSF6-201ENST00000266679 DYMQ7RTS9 669 aa14.4□□□□□ -0.1
CPSF6-201ENST00000266679 FAM114A1Q8IWE2 563 aa14.4□□□□□ -0.1
CPSF6-201ENST00000266679 ZFPM1Q8IX07 1006 aa14.4□□□□□ -0.1
CPSF6-201ENST00000266679 OR8K1Q8NGG5 319 aa14.4□□□□□ -0.1
CPSF6-201ENST00000266679 PCMTD1Q96MG8 357 aaPredicted RBP14.4□□□□□ -0.1
CPSF6-201ENST00000266679 PUF60Q9UHX1 559 aaKnown RBP14.4□□□□□ -0.1
CPSF6-201ENST00000266679 COL4A5P29400 1685 aa14.4□□□□□ -0.1
CPSF6-201ENST00000266679 MYO3BQ8WXR4 1341 aa14.4□□□□□ -0.1
CPSF6-201ENST00000266679 LTBP3Q9NS15 1303 aa14.4□□□□□ -0.1
CPSF6-201ENST00000266679 CTAGE9A4FU28 777 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 FAM196BA6NMK8 535 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 CACNB3P54284 484 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 APOBEC3HQ6NTF7 200 aaKnown RBP14.39□□□□□ -0.11
CPSF6-201ENST00000266679 LARP4BQ92615 738 aaKnown RBP14.39□□□□□ -0.11
CPSF6-201ENST00000266679 CUL5Q93034 780 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 GJA10Q969M2 543 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 DNAJC7Q99615 494 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 NUDT12Q9BQG2 462 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 SEMA6BQ9H3T3 888 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 DBNDD1Q9H9R9 158 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 STK17AQ9UEE5 414 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 CAPN11Q9UMQ6 739 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 REXO2Q9Y3B8 237 aaKnown RBP14.39□□□□□ -0.11
CPSF6-201ENST00000266679 FHOD1Q9Y613 1164 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 POTECB2RU33 542 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 DDNO94850 711 aaPredicted RBP14.39□□□□□ -0.11
CPSF6-201ENST00000266679 NDUFA10O95299 355 aa14.39□□□□□ -0.11
CPSF6-201ENST00000266679 CRKP46108 304 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms