RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 PCDHB3Q9Y5E6 796 aa8.12□□□□□ -1.11
SMARCE1-201ENST00000264640 USP17L15C9J2P7 530 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 USP17L13C9JLJ4 530 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 USP17L11C9JVI0 530 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 USP17L18D6R9N7 530 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 USP17L22D6RA61 530 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 USP17L17D6RBQ6 530 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 USP17L19D6RCP7 530 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 USP17L20D6RJB6 530 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 GOLIM4O00461 696 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 CTAGE5O15320 804 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 COBLO75128 1261 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 TIMP1P01033 207 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 CSF2RAP15509 400 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 RABGGTBP53611 331 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 USP17L24Q0WX57 530 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 TOB2Q14106 344 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 TTF1Q15361 905 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 OLFML2BQ68BL8 750 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 SPTY2D1Q68D10 685 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 CRACR2BQ8N4Y2 399 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 RNF214Q8ND24 703 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 ZNF274Q96GC6 653 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 TRIM34Q9BYJ4 488 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 PI4KBQ9UBF8 816 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 USP25Q9UHP3 1055 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 SAP30BPQ9UHR5 308 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 MSRAQ9UJ68 235 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 CACNA1AO00555 2505 aa8.11□□□□□ -1.11
SMARCE1-201ENST00000264640 SCN5AQ14524 2016 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 WDR19Q8NEZ3 1342 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 A0A1B0GUL7 405 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 KDM4AO75164 1064 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 GH2P01242 217 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 MYOGP15173 224 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 VCAM1P19320 739 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 SLC19A1P41440 591 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 STK3Q13188 491 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 PPIGQ13427 754 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 IMMTQ16891 758 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 AAK1Q2M2I8 961 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 RASIP1Q5U651 963 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 KRT40Q6A162 431 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 BLOC1S3Q6QNY0 202 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 SASS6Q6UVJ0 657 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 CATSPERGQ6ZRH7 1159 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 ZNF365Q70YC5 407 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 MAPKAPK5Q8IW41 473 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 FBXL16Q8N461 479 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 FAM200AQ8TCP9 573 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 BICD2Q8TD16 824 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 MOV10L1Q9BXT6 1211 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 PPP1R12CQ9BZL4 782 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 TNMDQ9H2S6 317 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 SLC28A3Q9HAS3 691 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 RAI14Q9P0K7 980 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 TBX21Q9UL17 535 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 NAV1Q8NEY1 1877 aa8.1□□□□□ -1.11
SMARCE1-201ENST00000264640 FLT1P17948 1338 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 DCDC2CA8MYV0 355 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 RFXAPO00287 272 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 GPR37L1O60883 481 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 ADCY5O95622 1261 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 CYP21A2P08686 494 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 UQCRFS1P1P0C7P4 283 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 RARBP10826 455 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 TAL1P17542 331 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 ERCC3P19447 782 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 TIMM10P62072 90 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 TRDNQ13061 729 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 RAB30Q15771 203 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 GLIPR1L2Q4G1C9 344 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 PPP2R2DQ66LE6 453 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 MFSD5Q6N075 450 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 CPLX2Q6PUV4 134 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 CCDC73Q6ZRK6 1079 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 ANKRD33Q7Z3H0 272 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 RALYLQ86SE5 291 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 RNF180Q86T96 592 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 SMARCC2Q8TAQ2 1214 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 ACER1Q8TDN7 264 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 TGFBRAP1Q8WUH2 860 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 LEO1Q8WVC0 666 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 BRF1Q92994 677 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 NSUN4Q96CB9 384 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 CHAMP1Q96JM3 812 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 UIMC1Q96RL1 719 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 MAP7D2Q96T17 732 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 CLSTN2Q9H4D0 955 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 RPAP3Q9H6T3 665 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 CD320Q9NPF0 282 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 STARD7Q9NQZ5 370 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 AATFQ9NY61 560 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 PTPRSQ13332 1948 aa8.09□□□□□ -1.11
SMARCE1-201ENST00000264640 PDS5AQ29RF7 1337 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-201ENST00000264640 E7EWF7 191 aa8.08□□□□□ -1.12
SMARCE1-201ENST00000264640 SMIM22K7EJ46 135 aa8.08□□□□□ -1.12
SMARCE1-201ENST00000264640 RRP9O43818 475 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-201ENST00000264640 HSPD1P10809 573 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-201ENST00000264640 GSTO1P78417 241 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms