RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CNNM3Q8NE01 707 aa25.91■■□□□ 1.74
SMARCB1-201ENST00000263121 RBSNQ9H1K0 784 aa25.91■■□□□ 1.74
SMARCB1-201ENST00000263121 ACTN4O43707 911 aaKnown RBP25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 DEKP35659 375 aaKnown RBP25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 MRE11P49959 708 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 FXR2P51116 673 aaKnown RBP eCLIP25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 TYRO3Q06418 890 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 PDILTQ8N807 584 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 TRERF1Q96PN7 1200 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 PANK2Q9BZ23 570 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 EHMT1Q9H9B1 1298 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 GBA2Q9HCG7 927 aaPredicted RBP25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 Q4G0T1 1027 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 L1TD1Q5T7N2 865 aaKnown RBP25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 IGSF22Q8N9C0 903 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 HAS1Q92839 578 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 SLC10A4Q96EP9 437 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 KCNMB3Q9NPA1 279 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 HOMER2Q9NSB8 354 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 SERTAD1Q9UHV2 236 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 AGTPBP1Q9UPW5 1226 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 RIPK3Q9Y572 518 aa25.9■■□□□ 1.74
SMARCB1-201ENST00000263121 TXKP42681 527 aa25.89■■□□□ 1.73
SMARCB1-201ENST00000263121 SNRNP48Q6IEG0 339 aaKnown RBP25.89■■□□□ 1.73
SMARCB1-201ENST00000263121 PYM1Q9BRP8 204 aaKnown RBP25.89■■□□□ 1.73
SMARCB1-201ENST00000263121 TEX13BQ9BXU2 312 aa25.89■■□□□ 1.73
SMARCB1-201ENST00000263121 CCSER1Q9C0I3 900 aa25.89■■□□□ 1.73
SMARCB1-201ENST00000263121 RNF146Q9NTX7 359 aa25.89■■□□□ 1.73
SMARCB1-201ENST00000263121 COL20A1Q9P218 1284 aa25.89■■□□□ 1.73
SMARCB1-201ENST00000263121 KIAA1468Q9P260 1216 aa25.89■■□□□ 1.73
SMARCB1-201ENST00000263121 TXLNAP40222 546 aa25.88■■□□□ 1.73
SMARCB1-201ENST00000263121 E2F4Q16254 413 aa25.88■■□□□ 1.73
SMARCB1-201ENST00000263121 SASS6Q6UVJ0 657 aa25.88■■□□□ 1.73
SMARCB1-201ENST00000263121 LENG9Q96B70 501 aa25.88■■□□□ 1.73
SMARCB1-201ENST00000263121 USP25Q9UHP3 1055 aa25.88■■□□□ 1.73
SMARCB1-201ENST00000263121 RPTORQ8N122 1335 aa25.88■■□□□ 1.73
SMARCB1-201ENST00000263121 PP2D1A8MPX8 630 aa25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 FAM86B1E9PN63 330 aa25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 FAM86B2P0C5J1 330 aa25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 TECP42680 631 aa25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 MDM2Q00987 491 aaPredicted RBP25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 TKFCQ3LXA3 575 aa25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 POTEEQ6S8J3 1075 aa25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 LBX2Q6XYB7 198 aa25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 FASTKD5Q7L8L6 764 aaKnown RBP25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 ZNF526Q8TF50 670 aaPredicted RBP25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 DHX58Q96C10 678 aa25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 CELF2O95319 508 aaKnown RBP25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 SLFN14P0C7P3 912 aa25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 CDC25AP30304 524 aa25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 TMEM266Q2M3C6 531 aa25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 KANK3Q6NY19 840 aa25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 SYTL5Q8TDW5 730 aaPredicted RBP25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 ERCC4Q92889 916 aaPredicted RBP25.87■■□□□ 1.73
SMARCB1-201ENST00000263121 TBX3O15119 743 aa25.86■■□□□ 1.73
SMARCB1-201ENST00000263121 SNAPC2Q13487 334 aa25.86■■□□□ 1.73
SMARCB1-201ENST00000263121 PDIA5Q14554 519 aa25.86■■□□□ 1.73
SMARCB1-201ENST00000263121 MB21D1Q8N884 522 aa25.86■■□□□ 1.73
SMARCB1-201ENST00000263121 C2orf69Q8N8R5 385 aa25.86■■□□□ 1.73
SMARCB1-201ENST00000263121 ETNPPLQ8TBG4 499 aa25.86■■□□□ 1.73
SMARCB1-201ENST00000263121 FRMPD4Q14CM0 1322 aa25.86■■□□□ 1.73
SMARCB1-201ENST00000263121 ITGBL1O95965 494 aaPredicted RBP25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 STAT3P40763 770 aa25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 UBA7P41226 1012 aa25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 RPS6P62753 249 aaKnown RBP25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 PRR16Q569H4 304 aa25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 GPAT2Q6NUI2 795 aa25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 IQUBQ8NA54 791 aa25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 MAF1Q9H063 256 aa25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 ASCC2Q9H1I8 757 aaPredicted RBP25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 TTC12Q9H892 705 aaPredicted RBP25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 HOOK1Q9UJC3 728 aaKnown RBP25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 TUBE1Q9UJT0 475 aa25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 RABGAP1Q9Y3P9 1069 aa25.85■■□□□ 1.73
SMARCB1-201ENST00000263121 IGLV3-22A0A075B6J6 115 aa25.84■■□□□ 1.73
SMARCB1-201ENST00000263121 FOXN1O15353 648 aa25.84■■□□□ 1.73
SMARCB1-201ENST00000263121 IRX3P78415 501 aaPredicted RBP25.84■■□□□ 1.73
SMARCB1-201ENST00000263121 PNOCQ13519 176 aa25.84■■□□□ 1.73
SMARCB1-201ENST00000263121 KARSQ15046 597 aaKnown RBP25.84■■□□□ 1.73
SMARCB1-201ENST00000263121 CHADLQ6NUI6 762 aa25.84■■□□□ 1.73
SMARCB1-201ENST00000263121 SLC30A10Q6XR72 485 aa25.84■■□□□ 1.73
SMARCB1-201ENST00000263121 RNF207Q6ZRF8 634 aa25.84■■□□□ 1.73
SMARCB1-201ENST00000263121 SH3RF1Q7Z6J0 888 aa25.84■■□□□ 1.73
SMARCB1-201ENST00000263121 RAB34Q9BZG1 259 aa25.84■■□□□ 1.73
SMARCB1-201ENST00000263121 DISC1Q9NRI5 854 aa25.84■■□□□ 1.73
SMARCB1-201ENST00000263121 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 XRCC6P12956 609 aaKnown RBP eCLIP25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 POSTNQ15063 836 aa25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 CABP7Q86V35 215 aa25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 SLFN12Q8IYM2 578 aa25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 MMTAG2Q9BU76 263 aaKnown RBP25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 ZNF76P36508 570 aa25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 UBXN2AP68543 259 aa25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 PABPC4Q13310 644 aaKnown RBP eCLIP25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 STX1AQ16623 288 aa25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 PDXDC2PQ6P474 469 aa25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 CEP57L1Q8IYX8 460 aa25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 BTBD7Q9P203 1132 aa25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 LRWD1Q9UFC0 647 aa25.83■■□□□ 1.73
SMARCB1-201ENST00000263121 PCDHA12Q9UN75 941 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms