RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 OLFML2BQ68BL8 750 aa19.05■□□□□ 0.64
CHCHD3-201ENST00000262570 MAMDC4Q6UXC1 1216 aa19.05■□□□□ 0.64
CHCHD3-201ENST00000262570 MSL3Q8N5Y2 521 aaKnown RBP19.05■□□□□ 0.64
CHCHD3-201ENST00000262570 FLRT1Q9NZU1 646 aa19.05■□□□□ 0.64
CHCHD3-201ENST00000262570 RBM19Q9Y4C8 960 aaKnown RBP19.05■□□□□ 0.64
CHCHD3-201ENST00000262570 LOC102724159A0A0B4J2E5 919 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 SPDYE3A6NKU9 549 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 ADCY3O60266 1144 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 ANP32AP39687 249 aaKnown RBP19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 GUCY1B3Q02153 619 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 AP3B2Q13367 1082 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 PWP2Q15269 919 aaKnown RBP19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 JAKMIP3Q5VZ66 844 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 LARP1BQ659C4 914 aaKnown RBP19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 MCTP2Q6DN12 878 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 TRMT44Q8IYL2 757 aaKnown RBP19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 RASGRP4Q8TDF6 673 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 TRIB2Q92519 343 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 TINF2Q9BSI4 451 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 PXMP2Q9NR77 195 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 TMEM260Q9NX78 707 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 PCDHA6Q9UN73 950 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 PCDHA8Q9Y5H6 950 aa19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 RBBP6Q7Z6E9 1792 aaKnown RBP19.04■□□□□ 0.64
CHCHD3-201ENST00000262570 EDNRBP24530 442 aa19.03■□□□□ 0.64
CHCHD3-201ENST00000262570 ARHGEF16Q5VV41 709 aa19.03■□□□□ 0.64
CHCHD3-201ENST00000262570 OXER1Q8TDS5 423 aa19.03■□□□□ 0.64
CHCHD3-201ENST00000262570 MORC4Q8TE76 937 aa19.03■□□□□ 0.64
CHCHD3-201ENST00000262570 IWS1Q96ST2 819 aa19.03■□□□□ 0.64
CHCHD3-201ENST00000262570 FRMPD4Q14CM0 1322 aa19.03■□□□□ 0.64
CHCHD3-201ENST00000262570 LCTP09848 1927 aa19.03■□□□□ 0.64
CHCHD3-201ENST00000262570 ASB14A6NK59 587 aa19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 ELNP15502 786 aa19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 EIF2AK2P19525 551 aaKnown RBP19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 FBXO46Q6PJ61 603 aaPredicted RBP19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 ARMCX2Q7L311 632 aa19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 DIS3L2Q8IYB7 885 aaKnown RBP19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 SPRYD3Q8NCJ5 442 aa19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 SLAIN1Q8ND83 568 aa19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 PGBD1Q96JS3 809 aa19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 PDCD2LQ9BRP1 358 aa19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 ANO3Q9BYT9 981 aa19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 BRMS1Q9HCU9 246 aa19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 RPTORQ8N122 1335 aa19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 SYNGAP1Q96PV0 1343 aa19.02■□□□□ 0.64
CHCHD3-201ENST00000262570 BTBD18B2RXH4 712 aa19.02■□□□□ 0.63
CHCHD3-201ENST00000262570 NR3C2P08235 984 aa19.02■□□□□ 0.63
CHCHD3-201ENST00000262570 PDCP20941 246 aa19.02■□□□□ 0.63
CHCHD3-201ENST00000262570 GRK4P32298 578 aa19.02■□□□□ 0.63
CHCHD3-201ENST00000262570 KRT2P35908 639 aa19.02■□□□□ 0.63
CHCHD3-201ENST00000262570 PGM5Q15124 567 aa19.02■□□□□ 0.63
CHCHD3-201ENST00000262570 DDX49Q9Y6V7 483 aaKnown RBP19.02■□□□□ 0.63
CHCHD3-201ENST00000262570 PLXNA1Q9UIW2 1896 aa19.01■□□□□ 0.63
CHCHD3-201ENST00000262570 B4DLN1 442 aa19.01■□□□□ 0.63
CHCHD3-201ENST00000262570 SNAI1O95863 264 aaPredicted RBP19.01■□□□□ 0.63
CHCHD3-201ENST00000262570 CYP2C19P33261 490 aa19.01■□□□□ 0.63
CHCHD3-201ENST00000262570 NR5A1Q13285 461 aa19.01■□□□□ 0.63
CHCHD3-201ENST00000262570 SAFBQ15424 915 aaKnown RBP eCLIP19.01■□□□□ 0.63
CHCHD3-201ENST00000262570 VSIG10LQ86VR7 867 aa19.01■□□□□ 0.63
CHCHD3-201ENST00000262570 MPHOSPH6Q99547 160 aaKnown RBP19.01■□□□□ 0.63
CHCHD3-201ENST00000262570 HMGCRP04035 888 aa19■□□□□ 0.63
CHCHD3-201ENST00000262570 SYT1P21579 422 aa19■□□□□ 0.63
CHCHD3-201ENST00000262570 UBXN2AP68543 259 aa19■□□□□ 0.63
CHCHD3-201ENST00000262570 IL31RAQ8NI17 732 aa19■□□□□ 0.63
CHCHD3-201ENST00000262570 TNFRSF25Q93038 417 aa19■□□□□ 0.63
CHCHD3-201ENST00000262570 EHMT1Q9H9B1 1298 aa19■□□□□ 0.63
CHCHD3-201ENST00000262570 CDKN2AIPQ9NXV6 580 aaPredicted RBP19■□□□□ 0.63
CHCHD3-201ENST00000262570 H3BQV1 296 aa18.99■□□□□ 0.63
CHCHD3-201ENST00000262570 SREBF1P36956 1147 aa18.99■□□□□ 0.63
CHCHD3-201ENST00000262570 PDE4DQ08499 809 aa18.99■□□□□ 0.63
CHCHD3-201ENST00000262570 IFFO2Q5TF58 517 aa18.99■□□□□ 0.63
CHCHD3-201ENST00000262570 MFSD14CQ5VZR4 134 aa18.99■□□□□ 0.63
CHCHD3-201ENST00000262570 KRT25Q7Z3Z0 450 aa18.99■□□□□ 0.63
CHCHD3-201ENST00000262570 CRYGNQ8WXF5 182 aa18.99■□□□□ 0.63
CHCHD3-201ENST00000262570 FOXP1Q9H334 677 aaPredicted RBP18.99■□□□□ 0.63
CHCHD3-201ENST00000262570 TRIM32Q13049 653 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 STXBP2Q15833 593 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 PCNX4Q63HM2 1172 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 XRRA1Q6P2D8 792 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 KATNBL1Q9H079 304 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 ABHD16BQ9H3Z7 469 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 CCDC194A0A1B0GVG4 234 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 EIF3JO75822 258 aaKnown RBP18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 MYCLP12524 364 aaPredicted RBP18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 U2AF2P26368 475 aaKnown RBP eCLIP18.98■□□□□ 0.636e-8■■■■□ 22.6
CHCHD3-201ENST00000262570 MRPS9P82933 396 aaKnown RBP18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 ARHGAP4P98171 946 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 CACNB2Q08289 660 aaPredicted RBP18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 NONOQ15233 471 aaKnown RBP eCLIP18.98■□□□□ 0.632e-6■■□□□ 12.7
CHCHD3-201ENST00000262570 SLC9C1Q4G0N8 1177 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 EARS2Q5JPH6 523 aaKnown RBP18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 MAP3K21Q5TCX8 1036 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 TBCKQ8TEA7 893 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 SH3TC2Q8TF17 1288 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 NRBP1Q9UHY1 535 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 CNPY2Q9Y2B0 182 aa18.98■□□□□ 0.63
CHCHD3-201ENST00000262570 KIF28PB7ZC32 967 aa18.97■□□□□ 0.63
CHCHD3-201ENST00000262570 INHAP05111 366 aa18.97■□□□□ 0.63
CHCHD3-201ENST00000262570 CYP3A4P08684 503 aa18.97■□□□□ 0.63
CHCHD3-201ENST00000262570 CCND2P30279 289 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms