RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 KCNK17Q96T54 332 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 AMNQ9BXJ7 453 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 A1CFQ9NQ94 594 aaKnown RBP13.37□□□□□ -0.27
PFDN1-201ENST00000261813 PNMA2Q9UL42 364 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 DOCK3Q8IZD9 2030 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 ABCB11O95342 1321 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 HTTP42858 3142 aa13.37□□□□□ -0.27
PFDN1-201ENST00000261813 SMCHD1A6NHR9 2005 aa13.36□□□□□ -0.27
PFDN1-201ENST00000261813 CCDC196A0A1B0GTZ2 297 aa13.36□□□□□ -0.27
PFDN1-201ENST00000261813 TK2O00142 265 aa13.36□□□□□ -0.27
PFDN1-201ENST00000261813 PGK2P07205 417 aa13.36□□□□□ -0.27
PFDN1-201ENST00000261813 HOXC6P09630 235 aa13.36□□□□□ -0.27
PFDN1-201ENST00000261813 SCRN1Q12765 414 aa13.36□□□□□ -0.27
PFDN1-201ENST00000261813 NTRK3Q16288 839 aa13.36□□□□□ -0.27
PFDN1-201ENST00000261813 RRP36Q96EU6 259 aaKnown RBP13.36□□□□□ -0.27
PFDN1-201ENST00000261813 INTS4Q96HW7 963 aaKnown RBP13.36□□□□□ -0.27
PFDN1-201ENST00000261813 TMX3Q96JJ7 454 aa13.36□□□□□ -0.27
PFDN1-201ENST00000261813 APBA2Q99767 749 aa13.36□□□□□ -0.27
PFDN1-201ENST00000261813 DNAJC25-GNG10A0A024R161 153 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 OPLAHO14841 1288 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 ADCY3O60266 1144 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 PFKFB2O60825 505 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 XRCC5P13010 732 aaKnown RBP13.35□□□□□ -0.27
PFDN1-201ENST00000261813 ELNP15502 786 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 CCL14Q16627 93 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 ME3Q16798 604 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 ZNF792Q3KQV3 632 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 NSMFQ6X4W1 530 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 DPP9Q86TI2 863 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 ANKRD35Q8N283 1001 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 PXYLP1Q8TE99 480 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 TRIB2Q92519 343 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 CYP39A1Q9NYL5 469 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 FLRT1Q9NZU1 646 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 SEC63Q9UGP8 760 aaKnown RBP13.35□□□□□ -0.27
PFDN1-201ENST00000261813 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.35□□□□□ -0.27
PFDN1-201ENST00000261813 PCDHA1Q9Y5I3 950 aa13.35□□□□□ -0.27
PFDN1-201ENST00000261813 PPFIA3O75145 1194 aa13.34□□□□□ -0.27
PFDN1-201ENST00000261813 CD2BP2O95400 341 aaKnown RBP13.34□□□□□ -0.27
PFDN1-201ENST00000261813 PDIA4P13667 645 aaKnown RBP13.34□□□□□ -0.27
PFDN1-201ENST00000261813 IFNAR1P17181 557 aa13.34□□□□□ -0.27
PFDN1-201ENST00000261813 CUL4AQ13619 759 aa13.34□□□□□ -0.27
PFDN1-201ENST00000261813 BAATQ14032 418 aaPredicted RBP13.34□□□□□ -0.27
PFDN1-201ENST00000261813 SLC30A10Q6XR72 485 aa13.34□□□□□ -0.27
PFDN1-201ENST00000261813 SH3TC2Q8TF17 1288 aa13.34□□□□□ -0.27
PFDN1-201ENST00000261813 TBC1D5Q92609 795 aa13.34□□□□□ -0.27
PFDN1-201ENST00000261813 PHKBQ93100 1093 aa13.34□□□□□ -0.27
PFDN1-201ENST00000261813 DDX11Q96FC9 970 aa13.34□□□□□ -0.27
PFDN1-201ENST00000261813 FGD4Q96M96 766 aa13.34□□□□□ -0.27
PFDN1-201ENST00000261813 SLC4A5Q9BY07 1137 aa13.34□□□□□ -0.27
PFDN1-201ENST00000261813 SLKQ9H2G2 1235 aaPredicted RBP13.34□□□□□ -0.27
PFDN1-201ENST00000261813 MRPL11Q9Y3B7 192 aaKnown RBP13.34□□□□□ -0.27
PFDN1-201ENST00000261813 V9GY48 417 aaPredicted RBP13.34□□□□□ -0.27
PFDN1-201ENST00000261813 BAZ2BQ9UIF8 2168 aaKnown RBP13.34□□□□□ -0.27
PFDN1-201ENST00000261813 IGHA2P01877 340 aa13.33□□□□□ -0.27
PFDN1-201ENST00000261813 GRK4P32298 578 aa13.33□□□□□ -0.27
PFDN1-201ENST00000261813 CNTN2Q02246 1040 aa13.33□□□□□ -0.27
PFDN1-201ENST00000261813 ST3GAL1Q11201 340 aa13.33□□□□□ -0.27
PFDN1-201ENST00000261813 SLC9C1Q4G0N8 1177 aa13.33□□□□□ -0.27
PFDN1-201ENST00000261813 WWC2Q6AWC2 1192 aa13.33□□□□□ -0.27
PFDN1-201ENST00000261813 NECAB1Q8N987 351 aa13.33□□□□□ -0.27
PFDN1-201ENST00000261813 FAM133AQ8N9E0 248 aa13.33□□□□□ -0.27
PFDN1-201ENST00000261813 RGS22Q8NE09 1264 aa13.33□□□□□ -0.27
PFDN1-201ENST00000261813 GPKOWQ92917 476 aaPredicted RBP eCLIP13.33□□□□□ -0.27
PFDN1-201ENST00000261813 MAML3Q96JK9 1138 aa13.33□□□□□ -0.27
PFDN1-201ENST00000261813 PURBQ96QR8 312 aaKnown RBP13.33□□□□□ -0.27
PFDN1-201ENST00000261813 MYH6P13533 1939 aa13.33□□□□□ -0.27
PFDN1-201ENST00000261813 ASTN1O14525 1302 aa13.33□□□□□ -0.28
PFDN1-201ENST00000261813 PFASO15067 1338 aa13.33□□□□□ -0.28
PFDN1-201ENST00000261813 PTPDC1A2A3K4 754 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 PRPF3O43395 683 aaKnown RBP13.32□□□□□ -0.28
PFDN1-201ENST00000261813 DTNBO60941 627 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 RPS6P62753 249 aaKnown RBP13.32□□□□□ -0.28
PFDN1-201ENST00000261813 GHRHRQ02643 423 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 TRIM32Q13049 653 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 MMRN1Q13201 1228 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 PKN1Q16512 942 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 PFKFB3Q16875 520 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-201ENST00000261813 CPLX2Q6PUV4 134 aaKnown RBP13.32□□□□□ -0.28
PFDN1-201ENST00000261813 RNF207Q6ZRF8 634 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 GTF3C6Q969F1 213 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 ARMC5Q96C12 935 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 LLPHQ9BRT6 129 aaKnown RBP13.32□□□□□ -0.28
PFDN1-201ENST00000261813 SLC26A6Q9BXS9 759 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 RNF26Q9BY78 433 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-201ENST00000261813 SLC5A4Q9NY91 659 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 DIS3Q9Y2L1 958 aaKnown RBP13.32□□□□□ -0.28
PFDN1-201ENST00000261813 RBBP6Q7Z6E9 1792 aaKnown RBP13.32□□□□□ -0.28
PFDN1-201ENST00000261813 LCTP09848 1927 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 SOWAHBA6NEL2 793 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 CPLX1O14810 134 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 CTDNEP1O95476 244 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 HMGCRP04035 888 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 INHAP05111 366 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 CALML3P27482 149 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 TRAF1Q13077 416 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 HABP4Q5JVS0 413 aaKnown RBP13.32□□□□□ -0.28
PFDN1-201ENST00000261813 OLFML2BQ68BL8 750 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 ADGRD1Q6QNK2 874 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 HEATR3Q7Z4Q2 680 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms