RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CAPN11Q9UMQ6 739 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 PCDHA6Q9UN73 950 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 PACSIN2Q9UNF0 486 aaPredicted RBP5.25□□□□□ -1.57
USP44-201ENST00000258499 JRKLQ9Y4A0 524 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 PCDHA8Q9Y5H6 950 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 MED1Q15648 1581 aaPredicted RBP5.25□□□□□ -1.57
USP44-201ENST00000258499 TLDC2A0PJX2 215 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 KCNK3O14649 394 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 TCP1P17987 556 aaKnown RBP5.25□□□□□ -1.57
USP44-201ENST00000258499 RDXP35241 583 aaKnown RBP5.25□□□□□ -1.57
USP44-201ENST00000258499 FAM26FQ5R3K3 315 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 FOXR1Q6PIV2 292 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 DPP8Q6V1X1 898 aaPredicted RBP5.25□□□□□ -1.57
USP44-201ENST00000258499 ADAT2Q7Z6V5 191 aaKnown RBP5.25□□□□□ -1.57
USP44-201ENST00000258499 CCDC65Q8IXS2 484 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 CCDC170Q8IYT3 715 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 CCDC155Q8N6L0 562 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 UBLCP1Q8WVY7 318 aaPredicted RBP5.25□□□□□ -1.57
USP44-201ENST00000258499 TBC1D5Q92609 795 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 LRRC27Q9C0I9 530 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 EPB41L5Q9HCM4 733 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.25□□□□□ -1.57
USP44-201ENST00000258499 CCNL1Q9UK58 526 aaPredicted RBP5.25□□□□□ -1.57
USP44-201ENST00000258499 PCDHA12Q9UN75 941 aa5.25□□□□□ -1.57
USP44-201ENST00000258499 RGPD2P0DJD1 1756 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 CETN3O15182 167 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 TBCAO75347 108 aaKnown RBP5.24□□□□□ -1.57
USP44-201ENST00000258499 ERLIN2O94905 339 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 TDP2O95551 362 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 PPP1R2P41236 205 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 MRPL12P52815 198 aaKnown RBP5.24□□□□□ -1.57
USP44-201ENST00000258499 GTF2IP78347 998 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 TCP10Q12799 353 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 PPFIA1Q13136 1202 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 MAN2A1Q16706 1144 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 USH1GQ495M9 461 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 VWA3BQ502W6 1294 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 INTS5Q6P9B9 1019 aaKnown RBP5.24□□□□□ -1.57
USP44-201ENST00000258499 GPBP1Q86WP2 473 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 SLF2Q8IX21 1173 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 IFT20Q8IY31 132 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 RETREG2Q8NC44 543 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 IPO4Q8TEX9 1081 aaKnown RBP5.24□□□□□ -1.57
USP44-201ENST00000258499 COG1Q8WTW3 980 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 MTRQ99707 1265 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 LRRC1Q9BTT6 524 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 LCMT1Q9UIC8 334 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 KIAA1024Q9UPX6 916 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 PCDHB13Q9Y5F0 798 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 USP17L5A8MUK1 530 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 EIF3CLB5ME19 914 aaKnown RBP5.24□□□□□ -1.57
USP44-201ENST00000258499 CHMP2AO43633 222 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 ORC4O43929 436 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 PPP1R12BO60237 982 aaPredicted RBP5.24□□□□□ -1.57
USP44-201ENST00000258499 HEXIM1O94992 359 aaKnown RBP5.24□□□□□ -1.57
USP44-201ENST00000258499 ARHGAP25P42331 645 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 CDK8P49336 464 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 CYP4A11Q02928 519 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 PDCLQ13371 301 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 EZH2Q15910 746 aaKnown RBP5.24□□□□□ -1.57
USP44-201ENST00000258499 ASIC2Q16515 512 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 IL17AQ16552 155 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 CEP85LQ5SZL2 805 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 NAA35Q5VZE5 725 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 KCTD1Q719H9 257 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 SH3RF1Q7Z6J0 888 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 SRLQ86TD4 932 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 FAM133AQ8N9E0 248 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 DDX12PQ92771 950 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 CEP95Q96GE4 821 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 MS4A14Q96JA4 679 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 EIF3CQ99613 913 aaKnown RBP5.24□□□□□ -1.57
USP44-201ENST00000258499 LZTS2Q9BRK4 669 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 PPANQ9NQ55 473 aaKnown RBP5.24□□□□□ -1.57
USP44-201ENST00000258499 PANK4Q9NVE7 773 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 BARHL2Q9NY43 387 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 FEZ2Q9UHY8 353 aaPredicted RBP5.24□□□□□ -1.57
USP44-201ENST00000258499 ANAPC4Q9UJX5 808 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 NFU1Q9UMS0 254 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 A0A1W2PQC6 194 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 TMEM110-MUSTN1A8MSY1 372 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 MEIS1O00470 390 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 ADAMTS3O15072 1205 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 HLA-DOAP06340 250 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 SRGNP10124 158 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 PLCG2P16885 1265 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 INPP5BP32019 993 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 SCNN1DP51172 638 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 HERVK_113P62684 666 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 TNNC1P63316 161 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 PAK2Q13177 524 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 RPS6KA1Q15418 735 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 C12orf60Q5U649 245 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 GALNT17Q6IS24 598 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 MSANTD4Q8NCY6 345 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 SPATA4Q8NEY3 305 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 PPM1EQ8WY54 764 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 AK8Q96MA6 479 aa5.24□□□□□ -1.57
USP44-201ENST00000258499 DDX25Q9UHL0 483 aaKnown RBP5.24□□□□□ -1.57
USP44-201ENST00000258499 FAM184BQ9ULE4 1060 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms