RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 HPS3Q969F9 1004 aa17.54■□□□□ 0.4
SLC6A8-201ENST00000253122 PLAAQ9Y263 795 aa17.54■□□□□ 0.4
SLC6A8-201ENST00000253122 LSP1P33241 339 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 DYNLL1P63167 89 aaKnown RBP17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 TCP11Q8WWU5 503 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 USP21Q9UK80 565 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 TSPY3P0CV98 308 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 TSPY8P0CW00 308 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 CCNE1P24864 410 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 CASP7P55210 303 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 GFPT1Q06210 699 aaPredicted RBP17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 LRRC41Q15345 812 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 GKAP1Q5VSY0 366 aaPredicted RBP17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 ELOA2Q8IYF1 753 aaPredicted RBP17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 ENAHQ8N8S7 591 aaPredicted RBP17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 PROCA1Q8NCQ7 364 aaPredicted RBP17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 RNPC3Q96LT9 517 aaKnown RBP17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 CCT8L2Q96SF2 557 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 TACO1Q9BSH4 297 aaKnown RBP17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 KLC4Q9NSK0 619 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 TNS2Q63HR2 1409 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 SIPA1L3O60292 1781 aaPredicted RBP17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 KRT13P13646 458 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 NAA35Q5VZE5 725 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 NLRP14Q86W24 1093 aa17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 RBM12Q9NTZ6 932 aaKnown RBP17.53■□□□□ 0.4
SLC6A8-201ENST00000253122 GYG1P46976 350 aa17.52■□□□□ 0.4
SLC6A8-201ENST00000253122 AARSP49588 968 aaKnown RBP eCLIP17.52■□□□□ 0.48e-22■□□□□ 9.2
SLC6A8-201ENST00000253122 CCDC152Q4G0S7 254 aa17.52■□□□□ 0.4
SLC6A8-201ENST00000253122 CAPN6Q9Y6Q1 641 aa17.52■□□□□ 0.4
SLC6A8-201ENST00000253122 NMT2O60551 498 aa17.52■□□□□ 0.4
SLC6A8-201ENST00000253122 PPP1R37O75864 691 aa17.52■□□□□ 0.4
SLC6A8-201ENST00000253122 PAPD7Q5XG87 772 aaKnown RBP17.52■□□□□ 0.4
SLC6A8-201ENST00000253122 DHTKD1Q96HY7 919 aaPredicted RBP17.52■□□□□ 0.4
SLC6A8-201ENST00000253122 SAMD15Q9P1V8 674 aa17.52■□□□□ 0.4
SLC6A8-201ENST00000253122 TSKSQ9UJT2 592 aa17.52■□□□□ 0.4
SLC6A8-201ENST00000253122 SUFUQ9UMX1 484 aa17.52■□□□□ 0.4
SLC6A8-201ENST00000253122 NOVA2Q9UNW9 492 aaKnown RBP17.52■□□□□ 0.4
SLC6A8-201ENST00000253122 ATP2C1P98194 919 aaPredicted RBP17.52■□□□□ 0.39
SLC6A8-201ENST00000253122 HIBCHQ6NVY1 386 aaPredicted RBP17.52■□□□□ 0.39
SLC6A8-201ENST00000253122 DAAM2Q86T65 1068 aa17.52■□□□□ 0.39
SLC6A8-201ENST00000253122 STAG1Q8WVM7 1258 aa17.52■□□□□ 0.39
SLC6A8-201ENST00000253122 PLCG1P19174 1290 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 PEX19P40855 299 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 IFI16Q16666 785 aaKnown RBP17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 CCDC25Q86WR0 208 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 NKX2-3Q8TAU0 364 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 ZNF473Q8WTR7 871 aaKnown RBP17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 LSM14BQ9BX40 385 aaKnown RBP17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 NDST4Q9H3R1 872 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 SLC24A3Q9HC58 644 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 CERKQ8TCT0 537 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 TBC1D5Q92609 795 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 AP1M1Q9BXS5 423 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 A0A1W2PQC6 194 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 LRRC53A6NM62 1247 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 GOLGA8HP0CJ92 632 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 AMPD2Q01433 879 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 HLFQ16534 295 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 KRT79Q5XKE5 535 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 ADSSL1Q8N142 457 aa17.51■□□□□ 0.39
SLC6A8-201ENST00000253122 CLGNO14967 610 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 FOXP2O15409 715 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 PALMO75781 387 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 FCER1AP12319 257 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 GNAQP50148 359 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 HDLBPQ00341 1268 aaKnown RBP17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 TFAP4Q01664 338 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 BARGINQ6ZT62 677 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 KSR1Q8IVT5 923 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 OR2W6PQ8NHA6 318 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 ADAMTS1Q9UHI8 967 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.5■□□□□ 0.397e-10■■□□□ 13.5
SLC6A8-201ENST00000253122 DISP2A7MBM2 1401 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 KRIT1O00522 736 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 ANKRD40Q6AI12 368 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 ZBTB1Q9Y2K1 713 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 CEP83Q9Y592 693 aa17.5■□□□□ 0.39
SLC6A8-201ENST00000253122 ZSCAN5CA6NGD5 496 aaPredicted RBP17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 IFNAR2P48551 515 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 TRAPPC10P48553 1259 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 TNNI2P48788 182 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 PMS1P54277 932 aaKnown RBP17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 ASIC2Q16515 512 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 CCDC50Q8IVM0 306 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 MARCH10Q8NA82 808 aaPredicted RBP17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 MICAL1Q8TDZ2 1067 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 EPN3Q9H201 632 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 REXO2Q9Y3B8 237 aaKnown RBP17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 DCAF17Q5H9S7 520 aaPredicted RBP17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 SUGP1Q8IWZ8 645 aaKnown RBP17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 TSEN2Q8NCE0 465 aaKnown RBP17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 CCDC26Q8TAB7 109 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 C6orf50Q9HD87 102 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 MROH5Q6ZUA9 1318 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 RCCD1A6NED2 376 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 PPP1R12BO60237 982 aaPredicted RBP17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 ALX1Q15699 326 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 ZFYVE27Q5T4F4 411 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 PEX26Q7Z412 305 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms