RNA–Protein interactions for RNA: ENST00000252487.9

TOMM40-201, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOMM40, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-201ENST00000252487 MMP19Q99542 508 aa29.72■■■□□ 2.35
TOMM40-201ENST00000252487 CCNT1O60563 726 aaKnown RBP29.71■■■□□ 2.35
TOMM40-201ENST00000252487 HSPA6P17066 643 aa29.71■■■□□ 2.35
TOMM40-201ENST00000252487 EIF2AK2P19525 551 aaKnown RBP29.71■■■□□ 2.35
TOMM40-201ENST00000252487 TRAPPC10P48553 1259 aa29.71■■■□□ 2.35
TOMM40-201ENST00000252487 CCAR1Q8IX12 1150 aaKnown RBP29.71■■■□□ 2.35
TOMM40-201ENST00000252487 CRYGNQ8WXF5 182 aa29.71■■■□□ 2.35
TOMM40-201ENST00000252487 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.71■■■□□ 2.35
TOMM40-201ENST00000252487 POLR3EQ9NVU0 708 aa29.71■■■□□ 2.35
TOMM40-201ENST00000252487 CFAP45Q9UL16 551 aa29.71■■■□□ 2.35
TOMM40-201ENST00000252487 TBC1D8O95759 1140 aa29.71■■■□□ 2.35
TOMM40-201ENST00000252487 MAP2K2P36507 400 aa29.71■■■□□ 2.35
TOMM40-201ENST00000252487 NASPP49321 788 aaPredicted RBP29.71■■■□□ 2.35
TOMM40-201ENST00000252487 PTPAQ15257 358 aa29.71■■■□□ 2.35
TOMM40-201ENST00000252487 MCTP2Q6DN12 878 aa29.71■■■□□ 2.35
TOMM40-201ENST00000252487 SPATA32Q96LK8 384 aa29.71■■■□□ 2.35
TOMM40-201ENST00000252487 RMDN3Q96TC7 470 aa29.71■■■□□ 2.35
TOMM40-201ENST00000252487 MAP3K20Q9NYL2 800 aaKnown RBP29.71■■■□□ 2.35
TOMM40-201ENST00000252487 PFASO15067 1338 aa29.7■■■□□ 2.35
TOMM40-201ENST00000252487 RPTORQ8N122 1335 aa29.7■■■□□ 2.35
TOMM40-201ENST00000252487 STK38Q15208 465 aa29.7■■■□□ 2.34
TOMM40-201ENST00000252487 ASTN1O14525 1302 aa29.69■■■□□ 2.34
TOMM40-201ENST00000252487 ZSWIM8A7E2V4 1837 aa29.69■■■□□ 2.34
TOMM40-201ENST00000252487 ALDH1A1P00352 501 aa29.69■■■□□ 2.34
TOMM40-201ENST00000252487 KCTD2Q14681 263 aa29.69■■■□□ 2.34
TOMM40-201ENST00000252487 TEX2Q8IWB9 1127 aa29.69■■■□□ 2.34
TOMM40-201ENST00000252487 SAMD3Q8N6K7 520 aa29.69■■■□□ 2.34
TOMM40-201ENST00000252487 LINC00301Q8NCQ3 95 aa29.69■■■□□ 2.34
TOMM40-201ENST00000252487 PXMP2Q9NR77 195 aa29.69■■■□□ 2.34
TOMM40-201ENST00000252487 SLC37A4O43826 429 aa29.68■■■□□ 2.34
TOMM40-201ENST00000252487 TRPA1O75762 1119 aa29.68■■■□□ 2.34
TOMM40-201ENST00000252487 FCER1AP12319 257 aa29.68■■■□□ 2.34
TOMM40-201ENST00000252487 MARCKSP29966 332 aaPredicted RBP29.68■■■□□ 2.34
TOMM40-201ENST00000252487 ATL3Q6DD88 541 aa29.68■■■□□ 2.34
TOMM40-201ENST00000252487 REM2Q8IYK8 340 aaPredicted RBP29.68■■■□□ 2.34
TOMM40-201ENST00000252487 UIMC1Q96RL1 719 aa29.68■■■□□ 2.34
TOMM40-201ENST00000252487 MCM4P33991 863 aa29.68■■■□□ 2.34
TOMM40-201ENST00000252487 GPR142Q7Z601 462 aa29.68■■■□□ 2.34
TOMM40-201ENST00000252487 RNF186Q9NXI6 227 aa29.68■■■□□ 2.34
TOMM40-201ENST00000252487 DOCK3Q8IZD9 2030 aa29.67■■■□□ 2.34
TOMM40-201ENST00000252487 POTEB2H3BUK9 544 aa29.67■■■□□ 2.34
TOMM40-201ENST00000252487 ARHGEF16Q5VV41 709 aa29.67■■■□□ 2.34
TOMM40-201ENST00000252487 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.67■■■□□ 2.345e-8■■□□□ 14.1
TOMM40-201ENST00000252487 CYP2W1Q8TAV3 490 aa29.67■■■□□ 2.34
TOMM40-201ENST00000252487 SCAND2PQ9GZW5 306 aaPredicted RBP29.67■■■□□ 2.34
TOMM40-201ENST00000252487 TMEM60Q9H2L4 133 aa29.67■■■□□ 2.34
TOMM40-201ENST00000252487 EHMT1Q9H9B1 1298 aa29.67■■■□□ 2.34
TOMM40-201ENST00000252487 RCOR1Q9UKL0 485 aa29.67■■■□□ 2.34
TOMM40-201ENST00000252487 CEP350Q5VT06 3117 aa29.67■■■□□ 2.34
TOMM40-201ENST00000252487 FRMPD4Q14CM0 1322 aa29.67■■■□□ 2.34
TOMM40-201ENST00000252487 SOWAHBA6NEL2 793 aa29.66■■■□□ 2.34
TOMM40-201ENST00000252487 PRPF40AO75400 957 aaKnown RBP29.66■■■□□ 2.34
TOMM40-201ENST00000252487 PTGDRQ13258 359 aa29.66■■■□□ 2.34
TOMM40-201ENST00000252487 PGM5Q15124 567 aa29.66■■■□□ 2.34
TOMM40-201ENST00000252487 POTEDQ86YR6 584 aa29.66■■■□□ 2.34
TOMM40-201ENST00000252487 FAM86B1E9PN63 330 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 YEATS4O95619 227 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 FAM86B2P0C5J1 330 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 SLC39A14Q15043 492 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 FAM133AQ8N9E0 248 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 PDCD2LQ9BRP1 358 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 SPTLC2O15270 562 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 MYCLP12524 364 aaPredicted RBP29.65■■■□□ 2.34
TOMM40-201ENST00000252487 ADORA2AP29274 412 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 MAPK4P31152 587 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 USP11P51784 963 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 PLEKHH3Q7Z736 793 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 C4orf32Q8N8J7 132 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 FGD4Q96M96 766 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 IVNS1ABPQ9Y6Y0 642 aa29.65■■■□□ 2.34
TOMM40-201ENST00000252487 DNAJC25-GNG10A0A024R161 153 aa29.64■■■□□ 2.34
TOMM40-201ENST00000252487 GADD45BO75293 160 aaPredicted RBP29.64■■■□□ 2.34
TOMM40-201ENST00000252487 CTGFP29279 349 aa29.64■■■□□ 2.34
TOMM40-201ENST00000252487 NFKBIBQ15653 356 aa29.64■■■□□ 2.34
TOMM40-201ENST00000252487 NSUN6Q8TEA1 469 aaKnown RBP29.64■■■□□ 2.34
TOMM40-201ENST00000252487 GJA10Q969M2 543 aa29.64■■■□□ 2.34
TOMM40-201ENST00000252487 DDX25Q9UHL0 483 aaKnown RBP29.64■■■□□ 2.34
TOMM40-201ENST00000252487 PLXNA1Q9UIW2 1896 aa29.64■■■□□ 2.34
TOMM40-201ENST00000252487 NEMFO60524 1076 aa29.63■■■□□ 2.33
TOMM40-201ENST00000252487 CYP3A4P08684 503 aa29.63■■■□□ 2.33
TOMM40-201ENST00000252487 PTPREP23469 700 aa29.63■■■□□ 2.33
TOMM40-201ENST00000252487 ZNF76P36508 570 aa29.63■■■□□ 2.33
TOMM40-201ENST00000252487 PRR16Q569H4 304 aa29.63■■■□□ 2.33
TOMM40-201ENST00000252487 ARHGAP39Q9C0H5 1083 aa29.63■■■□□ 2.33
TOMM40-201ENST00000252487 COBLO75128 1261 aa29.62■■■□□ 2.33
TOMM40-201ENST00000252487 ALDH5A1P51649 535 aaPredicted RBP29.62■■■□□ 2.33
TOMM40-201ENST00000252487 MRPS9P82933 396 aaKnown RBP29.62■■■□□ 2.33
TOMM40-201ENST00000252487 CEP131Q9UPN4 1083 aa29.62■■■□□ 2.33
TOMM40-201ENST00000252487 MGAMO43451 1857 aa29.62■■■□□ 2.33
TOMM40-201ENST00000252487 ME1P48163 572 aa29.62■■■□□ 2.33
TOMM40-201ENST00000252487 ATP2C1P98194 919 aaPredicted RBP29.62■■■□□ 2.33
TOMM40-201ENST00000252487 GRIN1Q05586 938 aa29.62■■■□□ 2.33
TOMM40-201ENST00000252487 PPP4R3AQ6IN85 833 aa29.62■■■□□ 2.33
TOMM40-201ENST00000252487 TMEM87AQ8NBN3 555 aa29.62■■■□□ 2.33
TOMM40-201ENST00000252487 MAF1Q9H063 256 aa29.62■■■□□ 2.33
TOMM40-201ENST00000252487 LMBRD1Q9NUN5 540 aa29.62■■■□□ 2.33
TOMM40-201ENST00000252487 MCM3APO60318 1980 aa29.61■■■□□ 2.33
TOMM40-201ENST00000252487 NR3C2P08235 984 aa29.61■■■□□ 2.33
TOMM40-201ENST00000252487 PCNX4Q63HM2 1172 aa29.61■■■□□ 2.33
TOMM40-201ENST00000252487 LENG9Q96B70 501 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms