RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 PRDM4Q9UKN5 801 aa21.83■■□□□ 1.09
CDC42EP1-201ENST00000249014 PPP1R2P41236 205 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 TBC1D8BQ0IIM8 1120 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 PDIA5Q14554 519 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 CCDC96Q2M329 555 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 KIF4BQ2VIQ3 1234 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 SRGAP1Q7Z6B7 1085 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 PARD6BQ9BYG5 372 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 DNAJC18Q9H819 358 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 PUF60Q9UHX1 559 aaKnown RBP21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 PCDHAC2Q9Y5I4 1007 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 SHROOM1Q2M3G4 852 aaPredicted RBP21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 PPP4R3AQ6IN85 833 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 CENPPQ6IPU0 288 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 UNC13DQ70J99 1090 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 COL23A1Q86Y22 540 aaPredicted RBP21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 SNX29Q8TEQ0 813 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 GJA10Q969M2 543 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 CDK5RAP3Q96JB5 506 aa21.82■■□□□ 1.08
CDC42EP1-201ENST00000249014 ZBTB5O15062 677 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 HLA-DOAP06340 250 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 MTIF2P46199 727 aaKnown RBP21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 CHMP4BP1P59074 171 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 ECM1Q16610 540 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 GPATCH4Q5T3I0 446 aaKnown RBP21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 FAM114A1Q8IWE2 563 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 ZSCAN29Q8IWY8 852 aaPredicted RBP21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 RAD54LQ92698 747 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 HAS1Q92839 578 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 CUL5Q93034 780 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 MTMR8Q96EF0 704 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 TRIM21P19474 475 aaKnown RBP21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 CRKP46108 304 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 CACNB3P54284 484 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 MEA1Q16626 185 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 NLGN1Q8N2Q7 840 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 NAPGQ99747 312 aaPredicted RBP21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 NOC4LQ9BVI4 516 aaKnown RBP21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 RAB34Q9BZG1 259 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 DBNDD1Q9H9R9 158 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 MYO1AQ9UBC5 1043 aa21.81■■□□□ 1.08
CDC42EP1-201ENST00000249014 PVALEFA0A1B0GWK0 134 aa21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 FAM196BA6NMK8 535 aa21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 ALDH1B1P30837 517 aa21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 HERVK_113P62684 666 aa21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 GABPB1Q06547 395 aaPredicted RBP21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 CC2D1AQ6P1N0 951 aaPredicted RBP21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 DDX25Q9UHL0 483 aaKnown RBP21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 TFR2Q9UP52 801 aa21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 G3V3G9 751 aa21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 PLA2G4AP47712 749 aa21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 TMEM119Q4V9L6 283 aa21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 DCAF8Q5TAQ9 597 aa21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 KRT79Q5XKE5 535 aa21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 GUCA1BQ9UMX6 200 aa21.8■■□□□ 1.08
CDC42EP1-201ENST00000249014 CEP112Q8N8E3 955 aa21.79■■□□□ 1.08
CDC42EP1-201ENST00000249014 NUP58Q9BVL2 599 aa21.79■■□□□ 1.08
CDC42EP1-201ENST00000249014 EHD4Q9H223 541 aa21.79■■□□□ 1.08
CDC42EP1-201ENST00000249014 PSTPIP2Q9H939 334 aa21.79■■□□□ 1.08
CDC42EP1-201ENST00000249014 MRPL12P52815 198 aaKnown RBP21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 TCP10Q12799 353 aa21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 TSR1Q2NL82 804 aaKnown RBP21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 RETREG2Q8NC44 543 aa21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 GLIS3Q8NEA6 775 aa21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 DDX12PQ92771 950 aa21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 ERGIC2Q96RQ1 377 aa21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 SCN9AQ15858 1988 aa21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 IDEP14735 1019 aa21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 EHHADHQ08426 723 aa21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 TUBB2AQ13885 445 aa21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 ZDHHC15Q96MV8 337 aa21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 TUBB2BQ9BVA1 445 aa21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 ATF5Q9Y2D1 282 aaPredicted RBP21.78■■□□□ 1.08
CDC42EP1-201ENST00000249014 SASH3O75995 380 aa21.77■■□□□ 1.08
CDC42EP1-201ENST00000249014 TBC1D8O95759 1140 aa21.77■■□□□ 1.08
CDC42EP1-201ENST00000249014 ZBED6P86452 979 aa21.77■■□□□ 1.08
CDC42EP1-201ENST00000249014 AMPD2Q01433 879 aa21.77■■□□□ 1.08
CDC42EP1-201ENST00000249014 KIAA0825Q8IV33 1275 aa21.77■■□□□ 1.08
CDC42EP1-201ENST00000249014 GUF1Q8N442 669 aaKnown RBP21.77■■□□□ 1.08
CDC42EP1-201ENST00000249014 ANKZF1Q9H8Y5 726 aa21.77■■□□□ 1.08
CDC42EP1-201ENST00000249014 DDTLA6NHG4 134 aaPredicted RBP21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 USP17L15C9J2P7 530 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 USP17L13C9JLJ4 530 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 USP17L11C9JVI0 530 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 USP17L18D6R9N7 530 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 USP17L22D6RA61 530 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 USP17L17D6RBQ6 530 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 USP17L19D6RCP7 530 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 USP17L20D6RJB6 530 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 MMP10P09238 476 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 PDE6BP35913 854 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 USP17L24Q0WX57 530 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 USP17L6PQ6QN14 398 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 MASTLQ96GX5 879 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 CCDC17Q96LX7 622 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 PCMTD1Q96MG8 357 aaPredicted RBP21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 HAUS4Q9H6D7 363 aa21.77■■□□□ 1.07
CDC42EP1-201ENST00000249014 RAD21O60216 631 aa21.76■■□□□ 1.07
CDC42EP1-201ENST00000249014 EEF2P13639 858 aaKnown RBP21.76■■□□□ 1.07
CDC42EP1-201ENST00000249014 QRICH1Q2TAL8 776 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms