RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 TRIM58Q8NG06 486 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 HEMGNQ9BXL5 484 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 GJA3Q9Y6H8 435 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 PALMO75781 387 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 C10orf76Q5T2E6 689 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 MIER3Q7Z3K6 550 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 PAGE5Q96GU1 130 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 DBNLQ9UJU6 430 aaKnown RBP8.2□□□□□ -1.1
RIF1-201ENST00000243326 FLOT1O75955 427 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 TSTA3Q13630 321 aaPredicted RBP8.2□□□□□ -1.1
RIF1-201ENST00000243326 KLHL29Q96CT2 875 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 APOL6Q9BWW8 343 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 KANSL2Q9H9L4 492 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 SFI1A8K8P3 1242 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 DYNLL2Q96FJ2 89 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 FERMT1Q9BQL6 677 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 HOMER3Q9NSC5 361 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 LZTS1Q9Y250 596 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 GCP02774 474 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 KIF23Q02241 960 aaPredicted RBP8.2□□□□□ -1.1
RIF1-201ENST00000243326 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.2□□□□□ -1.1
RIF1-201ENST00000243326 PPME1Q9Y570 386 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 A0A0G2JND7 137 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 SKAP2O75563 359 aaPredicted RBP8.2□□□□□ -1.1
RIF1-201ENST00000243326 HABP4Q5JVS0 413 aaKnown RBP8.2□□□□□ -1.1
RIF1-201ENST00000243326 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.2□□□□□ -1.16e-7■■■■□ 23.4
RIF1-201ENST00000243326 EXT2Q93063 718 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 DDX25Q9UHL0 483 aaKnown RBP8.2□□□□□ -1.1
RIF1-201ENST00000243326 ANAPC5Q9UJX4 755 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 ABCC10Q5T3U5 1492 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 PI4K2BG5E9Z4 385 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 H7C0C1 242 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 RPL13P26373 211 aaKnown RBP8.2□□□□□ -1.1
RIF1-201ENST00000243326 ATP5OP48047 213 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 MTM1Q13496 603 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 SPICE1Q8N0Z3 855 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 ZNF148Q9UQR1 794 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 LAMC3Q9Y6N6 1575 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 DDIT3P35638 169 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 ZNF274Q96GC6 653 aaPredicted RBP8.2□□□□□ -1.1
RIF1-201ENST00000243326 DCTN4Q9UJW0 460 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 KIAA1024Q9UPX6 916 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 TADA3O75528 432 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 CYP2D6P10635 497 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 TUBB2AQ13885 445 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 PLA2G4DQ86XP0 818 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 TUBB2BQ9BVA1 445 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 AK9Q5TCS8 1911 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 TTLL11Q8NHH1 800 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 ATP1A1P05023 1023 aaKnown RBP8.2□□□□□ -1.1
RIF1-201ENST00000243326 SNX16P57768 344 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 BFSP1Q12934 665 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 MYO1EQ12965 1108 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 SCARA5Q6ZMJ2 495 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 POMGNT1Q8WZA1 660 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 PUS7LQ9H0K6 701 aaKnown RBP8.2□□□□□ -1.1
RIF1-201ENST00000243326 ABCA10Q8WWZ4 1543 aa8.2□□□□□ -1.1
RIF1-201ENST00000243326 KIF28PB7ZC32 967 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 SLC8A1P32418 973 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 KLK7P49862 253 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 MAGOHP61326 146 aaKnown RBP8.19□□□□□ -1.1
RIF1-201ENST00000243326 TUBB4BP68371 445 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 PLBD2Q8NHP8 589 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 RIC8AQ9NPQ8 531 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 LCORLQ8N3X6 602 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 EYA3Q99504 573 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 GMNNO75496 209 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 PLEKHA8P1O95397 391 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 MMEP08473 750 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 OSTNP61366 133 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 MAP7Q14244 749 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 HVCN1Q96D96 273 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 TTC7AQ9ULT0 858 aaPredicted RBP8.19□□□□□ -1.1
RIF1-201ENST00000243326 BTKQ06187 659 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 TOB2Q14106 344 aaPredicted RBP8.19□□□□□ -1.1
RIF1-201ENST00000243326 SUN1O94901 812 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 SSH3Q8TE77 659 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 RAPGEF5Q92565 580 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 PLEKHF1Q96S99 279 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 TSC22D3Q99576 134 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 MED4Q9NPJ6 270 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 ESYT2A0FGR8 921 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 DNM2P50570 870 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 NOP9Q86U38 636 aaKnown RBP8.19□□□□□ -1.1
RIF1-201ENST00000243326 TMEM87AQ8NBN3 555 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 A0A0G2JLW4 131 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 RFX6Q8HWS3 928 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 FANCBQ8NB91 859 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 AGR3Q8TD06 166 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 EHD2Q9NZN4 543 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 AOX1Q06278 1338 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 RBM6P78332 1123 aaKnown RBP8.19□□□□□ -1.1
RIF1-201ENST00000243326 KRT25Q7Z3Z0 450 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 YY1P25490 414 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 LRRC36Q1X8D7 754 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 METTL13Q8N6R0 699 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 DTX3LQ8TDB6 740 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 PCDHB4Q9Y5E5 795 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 NPHP3-ACAD11A0A0J9YXS1 232 aa8.19□□□□□ -1.1
RIF1-201ENST00000243326 NDUFA10O95299 355 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms