RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 EPB41P11171 864 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 NT5C2P49902 561 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 TFAP4Q01664 338 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 PTPROQ16827 1216 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 LRRC55Q6ZSA7 311 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 FNBP4Q8N3X1 1017 aaPredicted RBP13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 CSGALNACT2Q8N6G5 542 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 MARCH10Q8NA82 808 aaPredicted RBP13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 SETDB2Q96T68 719 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 UBA5Q9GZZ9 404 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 CWC15Q9P013 229 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 LRWD1Q9UFC0 647 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 MYH4Q9Y623 1939 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 PPFIA4O75335 1185 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 TBC1D9BQ66K14 1250 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 C10orf67Q8IYJ2 551 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 GJA10Q969M2 543 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 CAPZA3Q96KX2 299 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 LRRC1Q9BTT6 524 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 ABCB11O95342 1321 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 BHMG1C9JSJ3 638 aaPredicted RBP13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 PSMA7O14818 248 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 IDEP14735 1019 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 CCDC178Q5BJE1 867 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 EMC10Q5UCC4 262 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 EHBP1Q8NDI1 1231 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 ANKRD20A12PQ8NF67 263 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 CCDC102AQ96A19 550 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 JRKLQ9Y4A0 524 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 G3V3G9 751 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 ZBTB48P10074 688 aaPredicted RBP13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 MAGEA9P43362 315 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 GRIK5Q16478 980 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 DCAF8Q5TAQ9 597 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 HAUS3Q68CZ6 603 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 DPY19L2P1Q6NXN4 242 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 FOXR2Q6PJQ5 311 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 TRIM47Q96LD4 638 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 PNMA5Q96PV4 448 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 FAM184BQ9ULE4 1060 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 QSER1Q2KHR3 1735 aa13.31□□□□□ -0.28
SEC61A1-201ENST00000243253 MPHOSPH10O00566 681 aaKnown RBP13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 RGL2O15211 777 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 KIF5BP33176 963 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 KCNMA1Q12791 1236 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 GRB10Q13322 594 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 STIM1Q13586 685 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 LETM2Q2VYF4 491 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 TSEN2Q8NCE0 465 aaKnown RBP13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 AFAP1L1Q8TED9 768 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 NLRP3Q96P20 1036 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 MCM3P25205 808 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 ZCWPW2Q504Y3 356 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 SPATA4Q8NEY3 305 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 PIK3R5Q8WYR1 880 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 CAVIN3Q969G5 261 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 TLR10Q9BXR5 811 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 CRNKL1Q9BZJ0 848 aaKnown RBP13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 RABEP2Q9H5N1 569 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 KAT14Q9H8E8 782 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 MLXIPQ9HAP2 919 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 PCDHA13Q9Y5I0 950 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 NOL4O94818 638 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 CYLC1P35663 651 aaPredicted RBP13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 CKAP4Q07065 602 aaKnown RBP13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 TBC1D8BQ0IIM8 1120 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 TTMPQ5BVD1 217 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 LEKR1Q6ZMV7 388 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 SPZ1Q9BXG8 430 aa13.3□□□□□ -0.28
SEC61A1-201ENST00000243253 SPATA31A1Q5TZJ5 1347 aa13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 CCDC194A0A1B0GVG4 234 aa13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 KLHDC7AQ5VTJ3 777 aa13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 OSBPL9Q96SU4 736 aa13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 RSPH14Q9UHP6 348 aa13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 TSPY3P0CV98 308 aa13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 TSPY8P0CW00 308 aa13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 VWA3BQ502W6 1294 aa13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 CABP7Q86V35 215 aa13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 LINC00116Q8NCU8 138 aa13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 SECISBP2LQ93073 1101 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 TMEM47Q9BQJ4 181 aa13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 FRMPD2Q68DX3 1309 aaPredicted RBP13.29□□□□□ -0.28
SEC61A1-201ENST00000243253 TLR2O60603 784 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 RASA1P20936 1047 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 HIBADHP31937 336 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 IRAK1P51617 712 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 NAP1L1P55209 391 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 MTMR8Q96EF0 704 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 EHD4Q9H223 541 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 LY75O60449 1722 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 FAM196BA6NMK8 535 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 TRIM21P19474 475 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 KIF11P52732 1056 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 GLIS3Q8NEA6 775 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 TRIM58Q8NG06 486 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 TSGA10Q9BZW7 698 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 EHD2Q9NZN4 543 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 TBC1D7Q9P0N9 293 aa13.28□□□□□ -0.28
SEC61A1-201ENST00000243253 ZNF652Q9Y2D9 606 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms